RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 IGF1RP08069 1367 aa21.88■■□□□ 1.09
TRA2B-206ENST00000456380 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
TRA2B-206ENST00000456380 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
TRA2B-206ENST00000456380 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
TRA2B-206ENST00000456380 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
TRA2B-206ENST00000456380 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
TRA2B-206ENST00000456380 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
TRA2B-206ENST00000456380 ADCY10Q96PN6 1610 aa21.75■■□□□ 1.07
TRA2B-206ENST00000456380 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
TRA2B-206ENST00000456380 CUL7Q14999 1698 aa21.73■■□□□ 1.07
TRA2B-206ENST00000456380 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.07
TRA2B-206ENST00000456380 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
TRA2B-206ENST00000456380 PTPRGP23470 1445 aa21.66■■□□□ 1.06
TRA2B-206ENST00000456380 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
TRA2B-206ENST00000456380 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
TRA2B-206ENST00000456380 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
TRA2B-206ENST00000456380 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
TRA2B-206ENST00000456380 ABCC2Q92887 1545 aa21.54■■□□□ 1.04
TRA2B-206ENST00000456380 KDM6BO15054 1643 aa21.52■■□□□ 1.04
TRA2B-206ENST00000456380 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
TRA2B-206ENST00000456380 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
TRA2B-206ENST00000456380 ASXL2Q76L83 1435 aa21.49■■□□□ 1.03
TRA2B-206ENST00000456380 UHRF1BP1LA0JNW5 1464 aa21.48■■□□□ 1.03
TRA2B-206ENST00000456380 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
TRA2B-206ENST00000456380 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
TRA2B-206ENST00000456380 PLB1Q6P1J6 1458 aa21.47■■□□□ 1.03
TRA2B-206ENST00000456380 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
TRA2B-206ENST00000456380 UGGT2Q9NYU1 1516 aa21.43■■□□□ 1.02
TRA2B-206ENST00000456380 GLI2P10070 1586 aa21.42■■□□□ 1.02
TRA2B-206ENST00000456380 KDM5BQ9UGL1 1544 aa21.4■■□□□ 1.02
TRA2B-206ENST00000456380 PPRC1Q5VV67 1664 aaKnown RBP21.38■■□□□ 1.01
TRA2B-206ENST00000456380 EPRSP07814 1512 aaKnown RBP21.36■■□□□ 1.01
TRA2B-206ENST00000456380 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
TRA2B-206ENST00000456380 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1
TRA2B-206ENST00000456380 ZCCHC11Q5TAX3 1644 aaKnown RBP21.31■■□□□ 1
TRA2B-206ENST00000456380 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
TRA2B-206ENST00000456380 TEX14Q8IWB6 1497 aa21.25■□□□□ 0.99
TRA2B-206ENST00000456380 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
TRA2B-206ENST00000456380 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
TRA2B-206ENST00000456380 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
TRA2B-206ENST00000456380 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
TRA2B-206ENST00000456380 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
TRA2B-206ENST00000456380 ABCA8O94911 1581 aa21.19■□□□□ 0.98
TRA2B-206ENST00000456380 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
TRA2B-206ENST00000456380 CD109Q6YHK3 1445 aa21.15■□□□□ 0.98
TRA2B-206ENST00000456380 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
TRA2B-206ENST00000456380 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
TRA2B-206ENST00000456380 CFAP43Q8NDM7 1665 aa21.09■□□□□ 0.97
TRA2B-206ENST00000456380 ARID3CA6NKF2 412 aa21.08■□□□□ 0.96
TRA2B-206ENST00000456380 ATP10BO94823 1461 aa21.05■□□□□ 0.96
TRA2B-206ENST00000456380 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
TRA2B-206ENST00000456380 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
TRA2B-206ENST00000456380 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
TRA2B-206ENST00000456380 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
TRA2B-206ENST00000456380 SAMD9Q5K651 1589 aa20.96■□□□□ 0.95
TRA2B-206ENST00000456380 HECW2Q9P2P5 1572 aa20.95■□□□□ 0.94
TRA2B-206ENST00000456380 ABCA9Q8IUA7 1624 aa20.92■□□□□ 0.94
TRA2B-206ENST00000456380 PHLDB1Q86UU1 1377 aa20.91■□□□□ 0.94
TRA2B-206ENST00000456380 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
TRA2B-206ENST00000456380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
TRA2B-206ENST00000456380 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
TRA2B-206ENST00000456380 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
TRA2B-206ENST00000456380 KIF21BO75037 1637 aa20.9■□□□□ 0.94
TRA2B-206ENST00000456380 RAPGEF3O95398 923 aa20.89■□□□□ 0.94
TRA2B-206ENST00000456380 NUP153P49790 1475 aaKnown RBP20.87■□□□□ 0.93
TRA2B-206ENST00000456380 EEA1Q15075 1411 aa20.87■□□□□ 0.93
TRA2B-206ENST00000456380 FHOD3Q2V2M9 1422 aa20.86■□□□□ 0.93
TRA2B-206ENST00000456380 NEO1Q92859 1461 aa20.84■□□□□ 0.93
TRA2B-206ENST00000456380 PLEKHD1A6NEE1 506 aa20.8■□□□□ 0.92
TRA2B-206ENST00000456380 FRMPD1Q5SYB0 1578 aa20.77■□□□□ 0.92
TRA2B-206ENST00000456380 PTPRMP28827 1452 aa20.76■□□□□ 0.91
TRA2B-206ENST00000456380 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
TRA2B-206ENST00000456380 ARID4BQ4LE39 1312 aaPredicted RBP20.73■□□□□ 0.91
TRA2B-206ENST00000456380 AKNAQ7Z591 1439 aa20.72■□□□□ 0.91
TRA2B-206ENST00000456380 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
TRA2B-206ENST00000456380 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
TRA2B-206ENST00000456380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.7■□□□□ 0.92e-9■■■□□ 17.4
TRA2B-206ENST00000456380 FANCAO15360 1455 aa20.69■□□□□ 0.9
TRA2B-206ENST00000456380 BCORL1Q5H9F3 1711 aa20.68■□□□□ 0.9
TRA2B-206ENST00000456380 RICTORQ6R327 1708 aa20.65■□□□□ 0.9
TRA2B-206ENST00000456380 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
TRA2B-206ENST00000456380 ARHGEF40Q8TER5 1519 aa20.65■□□□□ 0.9
TRA2B-206ENST00000456380 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
TRA2B-206ENST00000456380 MADDQ8WXG6 1647 aa20.65■□□□□ 0.9
TRA2B-206ENST00000456380 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.9
TRA2B-206ENST00000456380 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
TRA2B-206ENST00000456380 CFAP74Q9C0B2 1584 aa20.62■□□□□ 0.89
TRA2B-206ENST00000456380 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
TRA2B-206ENST00000456380 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
TRA2B-206ENST00000456380 PLCH2O75038 1416 aa20.59■□□□□ 0.89
TRA2B-206ENST00000456380 ZMYM4Q5VZL5 1548 aa20.59■□□□□ 0.89
TRA2B-206ENST00000456380 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.89
TRA2B-206ENST00000456380 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
TRA2B-206ENST00000456380 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
TRA2B-206ENST00000456380 ZFYVE16Q7Z3T8 1539 aa20.56■□□□□ 0.88
TRA2B-206ENST00000456380 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
TRA2B-206ENST00000456380 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
TRA2B-206ENST00000456380 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
TRA2B-206ENST00000456380 FBXO41Q8TF61 875 aa20.55■□□□□ 0.88
TRA2B-206ENST00000456380 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms