RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
GTF3C2-206ENST00000454704 SHROOM2Q13796 1616 aa16.57■□□□□ 0.24
GTF3C2-206ENST00000454704 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
GTF3C2-206ENST00000454704 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-206ENST00000454704 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
GTF3C2-206ENST00000454704 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
GTF3C2-206ENST00000454704 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
GTF3C2-206ENST00000454704 KIF13AQ9H1H9 1805 aa16.43■□□□□ 0.22
GTF3C2-206ENST00000454704 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
GTF3C2-206ENST00000454704 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
GTF3C2-206ENST00000454704 KIF21BO75037 1637 aa16.38■□□□□ 0.21
GTF3C2-206ENST00000454704 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
GTF3C2-206ENST00000454704 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
GTF3C2-206ENST00000454704 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
GTF3C2-206ENST00000454704 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
GTF3C2-206ENST00000454704 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
GTF3C2-206ENST00000454704 CUL7Q14999 1698 aa16.3■□□□□ 0.2
GTF3C2-206ENST00000454704 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
GTF3C2-206ENST00000454704 IGF1RP08069 1367 aa16.29■□□□□ 0.2
GTF3C2-206ENST00000454704 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
GTF3C2-206ENST00000454704 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
GTF3C2-206ENST00000454704 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
GTF3C2-206ENST00000454704 DIP2BQ9P265 1576 aa16.29■□□□□ 0.2
GTF3C2-206ENST00000454704 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
GTF3C2-206ENST00000454704 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.19
GTF3C2-206ENST00000454704 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
GTF3C2-206ENST00000454704 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
GTF3C2-206ENST00000454704 KDM6BO15054 1643 aa16.17■□□□□ 0.18
GTF3C2-206ENST00000454704 PTPRGP23470 1445 aa16.17■□□□□ 0.18
GTF3C2-206ENST00000454704 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
GTF3C2-206ENST00000454704 IQGAP2Q13576 1575 aa16.15■□□□□ 0.18
GTF3C2-206ENST00000454704 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
GTF3C2-206ENST00000454704 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
GTF3C2-206ENST00000454704 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
GTF3C2-206ENST00000454704 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
GTF3C2-206ENST00000454704 ASXL2Q76L83 1435 aa16.08■□□□□ 0.17
GTF3C2-206ENST00000454704 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
GTF3C2-206ENST00000454704 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
GTF3C2-206ENST00000454704 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
GTF3C2-206ENST00000454704 PPRC1Q5VV67 1664 aaKnown RBP16.06■□□□□ 0.16
GTF3C2-206ENST00000454704 CLIP1P30622 1438 aa16.06■□□□□ 0.16
GTF3C2-206ENST00000454704 PLB1Q6P1J6 1458 aa16.06■□□□□ 0.16
GTF3C2-206ENST00000454704 KDM4FA0A1W2PPD8 638 aa16.05■□□□□ 0.16
GTF3C2-206ENST00000454704 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
GTF3C2-206ENST00000454704 GLI2P10070 1586 aa16.05■□□□□ 0.16
GTF3C2-206ENST00000454704 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
GTF3C2-206ENST00000454704 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.16
GTF3C2-206ENST00000454704 CCER1Q8TC90 406 aaPredicted RBP16.02■□□□□ 0.15
GTF3C2-206ENST00000454704 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
GTF3C2-206ENST00000454704 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
GTF3C2-206ENST00000454704 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
GTF3C2-206ENST00000454704 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
GTF3C2-206ENST00000454704 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
GTF3C2-206ENST00000454704 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
GTF3C2-206ENST00000454704 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
GTF3C2-206ENST00000454704 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
GTF3C2-206ENST00000454704 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
GTF3C2-206ENST00000454704 TEX14Q8IWB6 1497 aa15.92■□□□□ 0.14
GTF3C2-206ENST00000454704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
GTF3C2-206ENST00000454704 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
GTF3C2-206ENST00000454704 APLP2Q06481 763 aa15.88■□□□□ 0.13
GTF3C2-206ENST00000454704 ABCA8O94911 1581 aa15.86■□□□□ 0.13
GTF3C2-206ENST00000454704 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.12
GTF3C2-206ENST00000454704 CD109Q6YHK3 1445 aa15.81■□□□□ 0.12
GTF3C2-206ENST00000454704 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
GTF3C2-206ENST00000454704 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
GTF3C2-206ENST00000454704 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
GTF3C2-206ENST00000454704 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
GTF3C2-206ENST00000454704 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
GTF3C2-206ENST00000454704 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
GTF3C2-206ENST00000454704 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
GTF3C2-206ENST00000454704 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
GTF3C2-206ENST00000454704 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
GTF3C2-206ENST00000454704 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
GTF3C2-206ENST00000454704 ATP10BO94823 1461 aa15.71■□□□□ 0.11
GTF3C2-206ENST00000454704 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
GTF3C2-206ENST00000454704 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
GTF3C2-206ENST00000454704 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
GTF3C2-206ENST00000454704 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
GTF3C2-206ENST00000454704 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
GTF3C2-206ENST00000454704 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
GTF3C2-206ENST00000454704 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
GTF3C2-206ENST00000454704 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
GTF3C2-206ENST00000454704 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
GTF3C2-206ENST00000454704 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
GTF3C2-206ENST00000454704 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
GTF3C2-206ENST00000454704 NUP153P49790 1475 aaKnown RBP15.61■□□□□ 0.09
GTF3C2-206ENST00000454704 NEO1Q92859 1461 aa15.6■□□□□ 0.09
GTF3C2-206ENST00000454704 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
GTF3C2-206ENST00000454704 RANGAP1P46060 587 aaPredicted RBP15.6■□□□□ 0.09
GTF3C2-206ENST00000454704 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
GTF3C2-206ENST00000454704 FHOD3Q2V2M9 1422 aa15.59■□□□□ 0.09
GTF3C2-206ENST00000454704 FRMPD1Q5SYB0 1578 aa15.59■□□□□ 0.09
GTF3C2-206ENST00000454704 RAPGEF3O95398 923 aa15.59■□□□□ 0.09
GTF3C2-206ENST00000454704 ADAMTSL3P82987 1691 aa15.58■□□□□ 0.08
GTF3C2-206ENST00000454704 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
GTF3C2-206ENST00000454704 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
GTF3C2-206ENST00000454704 PTPRMP28827 1452 aa15.55■□□□□ 0.08
GTF3C2-206ENST00000454704 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
GTF3C2-206ENST00000454704 BCORL1Q5H9F3 1711 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms