RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
RFC3P1-201ENST00000454568 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
RFC3P1-201ENST00000454568 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
RFC3P1-201ENST00000454568 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
RFC3P1-201ENST00000454568 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
RFC3P1-201ENST00000454568 GALR2O43603 387 aaPredicted RBP16.6■□□□□ 0.25
RFC3P1-201ENST00000454568 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
RFC3P1-201ENST00000454568 PROM2Q8N271 834 aa16.58■□□□□ 0.24
RFC3P1-201ENST00000454568 PHF12Q96QT6 1004 aa16.54■□□□□ 0.24
RFC3P1-201ENST00000454568 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
RFC3P1-201ENST00000454568 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
RFC3P1-201ENST00000454568 MS4A3Q96HJ5 214 aa16.33■□□□□ 0.2
RFC3P1-201ENST00000454568 MIER1Q8N108 512 aa16.32■□□□□ 0.2
RFC3P1-201ENST00000454568 ASTLQ6HA08 431 aaPredicted RBP16.31■□□□□ 0.2
RFC3P1-201ENST00000454568 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
RFC3P1-201ENST00000454568 SLC39A7Q92504 469 aa16.28■□□□□ 0.2
RFC3P1-201ENST00000454568 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
RFC3P1-201ENST00000454568 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
RFC3P1-201ENST00000454568 C7P10643 843 aa16.26■□□□□ 0.19
RFC3P1-201ENST00000454568 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
RFC3P1-201ENST00000454568 ATMINO43313 823 aaPredicted RBP16.25■□□□□ 0.19
RFC3P1-201ENST00000454568 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
RFC3P1-201ENST00000454568 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
RFC3P1-201ENST00000454568 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
RFC3P1-201ENST00000454568 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
RFC3P1-201ENST00000454568 METRNQ9UJH8 293 aa16.22■□□□□ 0.19
RFC3P1-201ENST00000454568 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
RFC3P1-201ENST00000454568 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
RFC3P1-201ENST00000454568 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
RFC3P1-201ENST00000454568 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
RFC3P1-201ENST00000454568 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
RFC3P1-201ENST00000454568 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
RFC3P1-201ENST00000454568 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
RFC3P1-201ENST00000454568 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
RFC3P1-201ENST00000454568 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
RFC3P1-201ENST00000454568 TIE1P35590 1138 aa16.08■□□□□ 0.16
RFC3P1-201ENST00000454568 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
RFC3P1-201ENST00000454568 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
RFC3P1-201ENST00000454568 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
RFC3P1-201ENST00000454568 MAP3K13O43283 966 aa16.07■□□□□ 0.16
RFC3P1-201ENST00000454568 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
RFC3P1-201ENST00000454568 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
RFC3P1-201ENST00000454568 SCUBE2Q9NQ36 999 aa16.01■□□□□ 0.15
RFC3P1-201ENST00000454568 NESP48681 1621 aa15.99■□□□□ 0.15
RFC3P1-201ENST00000454568 FKBP8Q14318 412 aa15.98■□□□□ 0.15
RFC3P1-201ENST00000454568 FAM212AQ96EL1 285 aa15.96■□□□□ 0.15
RFC3P1-201ENST00000454568 PLSCR2Q9NRY7 297 aa15.96■□□□□ 0.15
RFC3P1-201ENST00000454568 WIZO95785 1651 aa15.95■□□□□ 0.14
RFC3P1-201ENST00000454568 NUBP1P53384 320 aa15.94■□□□□ 0.14
RFC3P1-201ENST00000454568 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
RFC3P1-201ENST00000454568 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
RFC3P1-201ENST00000454568 CUX2O14529 1486 aa15.93■□□□□ 0.14
RFC3P1-201ENST00000454568 POTEMA6NI47 508 aa15.93■□□□□ 0.14
RFC3P1-201ENST00000454568 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
RFC3P1-201ENST00000454568 TTLL13PA6NNM8 815 aa15.92■□□□□ 0.14
RFC3P1-201ENST00000454568 SEC24BO95487 1268 aa15.91■□□□□ 0.14
RFC3P1-201ENST00000454568 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
RFC3P1-201ENST00000454568 IER5LQ5T953 404 aa15.88■□□□□ 0.13
RFC3P1-201ENST00000454568 POTEGQ6S5H5 508 aa15.88■□□□□ 0.13
RFC3P1-201ENST00000454568 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
RFC3P1-201ENST00000454568 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
RFC3P1-201ENST00000454568 TRIM35Q9UPQ4 493 aa15.84■□□□□ 0.13
RFC3P1-201ENST00000454568 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
RFC3P1-201ENST00000454568 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
RFC3P1-201ENST00000454568 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
RFC3P1-201ENST00000454568 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
RFC3P1-201ENST00000454568 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
RFC3P1-201ENST00000454568 IFNL1Q8IU54 200 aa15.79■□□□□ 0.12
RFC3P1-201ENST00000454568 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
RFC3P1-201ENST00000454568 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
RFC3P1-201ENST00000454568 COLQQ9Y215 455 aaPredicted RBP15.76■□□□□ 0.11
RFC3P1-201ENST00000454568 DCAF8Q5TAQ9 597 aa15.74■□□□□ 0.11
RFC3P1-201ENST00000454568 FAM163AQ96GL9 167 aaPredicted RBP15.74■□□□□ 0.11
RFC3P1-201ENST00000454568 TMEM106CQ9BVX2 250 aa15.74■□□□□ 0.11
RFC3P1-201ENST00000454568 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
RFC3P1-201ENST00000454568 PLCG2P16885 1265 aa15.68■□□□□ 0.1
RFC3P1-201ENST00000454568 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
RFC3P1-201ENST00000454568 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
RFC3P1-201ENST00000454568 CFTRP13569 1480 aa15.64■□□□□ 0.09
RFC3P1-201ENST00000454568 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
RFC3P1-201ENST00000454568 PYGBP11216 843 aa15.63■□□□□ 0.09
RFC3P1-201ENST00000454568 LCE2DQ5TA82 110 aaPredicted RBP15.62■□□□□ 0.09
RFC3P1-201ENST00000454568 GSE1Q14687 1217 aa15.61■□□□□ 0.09
RFC3P1-201ENST00000454568 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
RFC3P1-201ENST00000454568 WDR62O43379 1518 aa15.59■□□□□ 0.09
RFC3P1-201ENST00000454568 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
RFC3P1-201ENST00000454568 VASPP50552 380 aaPredicted RBP15.57■□□□□ 0.08
RFC3P1-201ENST00000454568 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
RFC3P1-201ENST00000454568 SLAIN1Q8ND83 568 aa15.57■□□□□ 0.08
RFC3P1-201ENST00000454568 OCEL1Q9H607 264 aa15.56■□□□□ 0.08
RFC3P1-201ENST00000454568 ZNF467Q7Z7K2 595 aaPredicted RBP15.53■□□□□ 0.08
RFC3P1-201ENST00000454568 PCDHB8Q9UN66 801 aa15.51■□□□□ 0.07
RFC3P1-201ENST00000454568 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
RFC3P1-201ENST00000454568 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
RFC3P1-201ENST00000454568 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
RFC3P1-201ENST00000454568 CHRM1P11229 460 aaPredicted RBP15.45■□□□□ 0.06
RFC3P1-201ENST00000454568 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.43■□□□□ 0.06
RFC3P1-201ENST00000454568 SNPHO15079 494 aa15.41■□□□□ 0.06
RFC3P1-201ENST00000454568 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
RFC3P1-201ENST00000454568 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms