RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 RUSC2Q8N2Y8 1516 aa45.76■■■■■ 4.92
NEK6-211ENST00000454453 ABCC10Q5T3U5 1492 aa45.58■■■■■ 4.89
NEK6-211ENST00000454453 MAPKBP1O60336 1514 aa45.52■■■■■ 4.88
NEK6-211ENST00000454453 ADCY10Q96PN6 1610 aa45.52■■■■■ 4.88
NEK6-211ENST00000454453 FAM69CQ0P6D2 419 aa45.52■■■■■ 4.88
NEK6-211ENST00000454453 DIP2BQ9P265 1576 aa45.47■■■■■ 4.87
NEK6-211ENST00000454453 NPM1P06748 294 aaKnown RBP eCLIP45.42■■■■■ 4.86
NEK6-211ENST00000454453 KIAA0586Q9BVV6 1533 aa45.42■■■■■ 4.86
NEK6-211ENST00000454453 IGF1RP08069 1367 aa45.41■■■■■ 4.86
NEK6-211ENST00000454453 CUL7Q14999 1698 aa45.28■■■■■ 4.84
NEK6-211ENST00000454453 KIF27Q86VH2 1401 aa45.26■■■■■ 4.84
NEK6-211ENST00000454453 KDM6BO15054 1643 aa45.18■■■■■ 4.82
NEK6-211ENST00000454453 TSPOAP1O95153 1857 aa45.13■■■■■ 4.82
NEK6-211ENST00000454453 PTPRGP23470 1445 aa45.09■■■■■ 4.81
NEK6-211ENST00000454453 KDM4FA0A1W2PPD8 638 aa45.08■■■■■ 4.81
NEK6-211ENST00000454453 CARMIL1Q5VZK9 1371 aa45.04■■■■■ 4.8
NEK6-211ENST00000454453 TTBK1Q5TCY1 1321 aaPredicted RBP44.98■■■■■ 4.79
NEK6-211ENST00000454453 ABCC2Q92887 1545 aa44.96■■■■■ 4.79
NEK6-211ENST00000454453 TNIKQ9UKE5 1360 aa44.96■■■■■ 4.79
NEK6-211ENST00000454453 CARMIL2Q6F5E8 1435 aa44.91■■■■■ 4.78
NEK6-211ENST00000454453 IQGAP2Q13576 1575 aa44.89■■■■■ 4.78
NEK6-211ENST00000454453 ASXL2Q76L83 1435 aa44.87■■■■■ 4.77
NEK6-211ENST00000454453 PPRC1Q5VV67 1664 aaKnown RBP44.86■■■■■ 4.77
NEK6-211ENST00000454453 GLI2P10070 1586 aa44.82■■■■■ 4.76
NEK6-211ENST00000454453 UHRF1BP1LA0JNW5 1464 aa44.81■■■■■ 4.76
NEK6-211ENST00000454453 PLB1Q6P1J6 1458 aa44.8■■■■■ 4.76
NEK6-211ENST00000454453 DISP1Q96F81 1524 aa44.8■■■■■ 4.76
NEK6-211ENST00000454453 UACAQ9BZF9 1416 aa44.74■■■■■ 4.75
NEK6-211ENST00000454453 KDM5BQ9UGL1 1544 aa44.64■■■■■ 4.74
NEK6-211ENST00000454453 COL17A1Q9UMD9 1497 aaPredicted RBP44.63■■■■■ 4.73
NEK6-211ENST00000454453 EPRSP07814 1512 aaKnown RBP44.62■■■■■ 4.73
NEK6-211ENST00000454453 UGGT2Q9NYU1 1516 aa44.61■■■■■ 4.73
NEK6-211ENST00000454453 MAP3K4Q9Y6R4 1608 aa44.57■■■■■ 4.73
NEK6-211ENST00000454453 RAPGEF2Q9Y4G8 1499 aa44.56■■■■■ 4.72
NEK6-211ENST00000454453 ZCCHC11Q5TAX3 1644 aaKnown RBP44.54■■■■■ 4.72
NEK6-211ENST00000454453 KIAA0556O60303 1618 aa44.53■■■■■ 4.72
NEK6-211ENST00000454453 ADGRL1O94910 1474 aa44.53■■■■■ 4.72
NEK6-211ENST00000454453 TEX14Q8IWB6 1497 aa44.39■■■■■ 4.7
NEK6-211ENST00000454453 WDR7Q9Y4E6 1490 aa44.32■■■■■ 4.69
NEK6-211ENST00000454453 ILDR1Q86SU0 546 aaPredicted RBP44.27■■■■■ 4.68
NEK6-211ENST00000454453 CTTNBP2Q8WZ74 1663 aa44.23■■■■■ 4.67
NEK6-211ENST00000454453 ABCA8O94911 1581 aa44.18■■■■■ 4.66
NEK6-211ENST00000454453 MAGI3Q5TCQ9 1506 aa44.12■■■■■ 4.65
NEK6-211ENST00000454453 HECW2Q9P2P5 1572 aa44.12■■■■■ 4.65
NEK6-211ENST00000454453 CD109Q6YHK3 1445 aa44.1■■■■■ 4.65
NEK6-211ENST00000454453 CFAP43Q8NDM7 1665 aa44.1■■■■■ 4.65
NEK6-211ENST00000454453 GOLGA3Q08378 1498 aa44.09■■■■■ 4.65
NEK6-211ENST00000454453 KCNH8Q96L42 1107 aa44.05■■■■■ 4.64
NEK6-211ENST00000454453 PRXQ9BXM0 1461 aa44.01■■■■■ 4.64
NEK6-211ENST00000454453 KIF21BO75037 1637 aa43.84■■■■■ 4.61
NEK6-211ENST00000454453 ARAP3Q8WWN8 1544 aa43.8■■■■■ 4.6
NEK6-211ENST00000454453 ATP10BO94823 1461 aa43.8■■■■■ 4.6
NEK6-211ENST00000454453 ARID3CA6NKF2 412 aa43.79■■■■■ 4.6
NEK6-211ENST00000454453 P3H3Q8IVL6 736 aa43.75■■■■■ 4.59
NEK6-211ENST00000454453 ABCA9Q8IUA7 1624 aa43.69■■■■■ 4.58
NEK6-211ENST00000454453 SAMD9Q5K651 1589 aa43.63■■■■■ 4.57
NEK6-211ENST00000454453 RAPGEF6Q8TEU7 1601 aa43.55■■■■■ 4.56
NEK6-211ENST00000454453 PHLDB1Q86UU1 1377 aa43.54■■■■■ 4.56
NEK6-211ENST00000454453 ADAMTSL3P82987 1691 aa43.54■■■■■ 4.56
NEK6-211ENST00000454453 RAPGEF3O95398 923 aa43.53■■■■■ 4.56
NEK6-211ENST00000454453 FAM9AQ8IZU1 332 aaPredicted RBP43.51■■■■■ 4.56
NEK6-211ENST00000454453 PTPRMP28827 1452 aa43.48■■■■■ 4.55
NEK6-211ENST00000454453 NEO1Q92859 1461 aa43.48■■■■■ 4.55
NEK6-211ENST00000454453 FRMPD1Q5SYB0 1578 aa43.48■■■■■ 4.55
NEK6-211ENST00000454453 CSRNP3Q8WYN3 585 aa43.44■■■■■ 4.54
NEK6-211ENST00000454453 NUP153P49790 1475 aaKnown RBP43.43■■■■■ 4.54
NEK6-211ENST00000454453 BCORL1Q5H9F3 1711 aa43.36■■■■■ 4.53
NEK6-211ENST00000454453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.36■■■■■ 4.53
NEK6-211ENST00000454453 HNRNPUL2Q1KMD3 747 aaKnown RBP43.36■■■■■ 4.53
NEK6-211ENST00000454453 MADDQ8WXG6 1647 aa43.31■■■■■ 4.52
NEK6-211ENST00000454453 FHOD3Q2V2M9 1422 aa43.3■■■■■ 4.52
NEK6-211ENST00000454453 RANGAP1P46060 587 aaPredicted RBP43.24■■■■■ 4.51
NEK6-211ENST00000454453 FBXO41Q8TF61 875 aa43.22■■■■■ 4.51
NEK6-211ENST00000454453 RICTORQ6R327 1708 aa43.21■■■■■ 4.51
NEK6-211ENST00000454453 ARHGEF40Q8TER5 1519 aa43.21■■■■■ 4.51
NEK6-211ENST00000454453 ARID4BQ4LE39 1312 aaPredicted RBP43.21■■■■■ 4.51
NEK6-211ENST00000454453 PCF11O94913 1555 aaKnown RBP43.18■■■■■ 4.5
NEK6-211ENST00000454453 LMTK3Q96Q04 1460 aa43.17■■■■■ 4.5
NEK6-211ENST00000454453 DENND4BO75064 1496 aaPredicted RBP43.16■■■■■ 4.5
NEK6-211ENST00000454453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.15■■■■■ 4.58e-6■■■■□ 23.7
NEK6-211ENST00000454453 AKNAQ7Z591 1439 aa43.14■■■■■ 4.5
NEK6-211ENST00000454453 PLEKHD1A6NEE1 506 aa43.13■■■■■ 4.49
NEK6-211ENST00000454453 RIMS1Q86UR5 1692 aaKnown RBP43.11■■■■■ 4.49
NEK6-211ENST00000454453 FANCAO15360 1455 aa43.11■■■■■ 4.49
NEK6-211ENST00000454453 EEA1Q15075 1411 aa43.1■■■■■ 4.49
NEK6-211ENST00000454453 TTC37Q6PGP7 1564 aa43.08■■■■■ 4.49
NEK6-211ENST00000454453 SIGLEC1Q9BZZ2 1709 aa43.07■■■■■ 4.49
NEK6-211ENST00000454453 CFAP74Q9C0B2 1584 aa43.05■■■■■ 4.48
NEK6-211ENST00000454453 ZMYM4Q5VZL5 1548 aa43.02■■■■■ 4.48
NEK6-211ENST00000454453 YEATS2Q9ULM3 1422 aa43■■■■■ 4.47
NEK6-211ENST00000454453 EFCAB5A4FU69 1503 aa42.99■■■■■ 4.47
NEK6-211ENST00000454453 CDK13Q14004 1512 aaKnown RBP42.95■■■■■ 4.47
NEK6-211ENST00000454453 ZFYVE16Q7Z3T8 1539 aa42.94■■■■■ 4.46
NEK6-211ENST00000454453 HECW1Q76N89 1606 aa42.89■■■■■ 4.46
NEK6-211ENST00000454453 HSPA2P54652 639 aa42.89■■■■■ 4.46
NEK6-211ENST00000454453 POGZQ7Z3K3 1410 aa42.87■■■■■ 4.45
NEK6-211ENST00000454453 MAGI2Q86UL8 1455 aa42.87■■■■■ 4.45
NEK6-211ENST00000454453 PLPPR3Q6T4P5 718 aa42.85■■■■■ 4.45
NEK6-211ENST00000454453 PLCH2O75038 1416 aa42.82■■■■■ 4.45
NEK6-211ENST00000454453 SCAPERQ9BY12 1400 aa42.8■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms