RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
AC007879.2-201ENST00000454444 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
AC007879.2-201ENST00000454444 IGF1RP08069 1367 aa13.57□□□□□ -0.24
AC007879.2-201ENST00000454444 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
AC007879.2-201ENST00000454444 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
AC007879.2-201ENST00000454444 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.25
AC007879.2-201ENST00000454444 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
AC007879.2-201ENST00000454444 PTPRGP23470 1445 aa13.49□□□□□ -0.25
AC007879.2-201ENST00000454444 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
AC007879.2-201ENST00000454444 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
AC007879.2-201ENST00000454444 CUL7Q14999 1698 aa13.47□□□□□ -0.25
AC007879.2-201ENST00000454444 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
AC007879.2-201ENST00000454444 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
AC007879.2-201ENST00000454444 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
AC007879.2-201ENST00000454444 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
AC007879.2-201ENST00000454444 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
AC007879.2-201ENST00000454444 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
AC007879.2-201ENST00000454444 IQGAP2Q13576 1575 aa13.36□□□□□ -0.27
AC007879.2-201ENST00000454444 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
AC007879.2-201ENST00000454444 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
AC007879.2-201ENST00000454444 UACAQ9BZF9 1416 aa13.35□□□□□ -0.27
AC007879.2-201ENST00000454444 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
AC007879.2-201ENST00000454444 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
AC007879.2-201ENST00000454444 KDM6BO15054 1643 aa13.33□□□□□ -0.28
AC007879.2-201ENST00000454444 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
AC007879.2-201ENST00000454444 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
AC007879.2-201ENST00000454444 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
AC007879.2-201ENST00000454444 DISP1Q96F81 1524 aa13.28□□□□□ -0.28
AC007879.2-201ENST00000454444 UGGT2Q9NYU1 1516 aa13.26□□□□□ -0.29
AC007879.2-201ENST00000454444 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
AC007879.2-201ENST00000454444 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
AC007879.2-201ENST00000454444 GLI2P10070 1586 aa13.24□□□□□ -0.29
AC007879.2-201ENST00000454444 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
AC007879.2-201ENST00000454444 TEX14Q8IWB6 1497 aa13.23□□□□□ -0.29
AC007879.2-201ENST00000454444 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
AC007879.2-201ENST00000454444 KIAA0556O60303 1618 aa13.21□□□□□ -0.3
AC007879.2-201ENST00000454444 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
AC007879.2-201ENST00000454444 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
AC007879.2-201ENST00000454444 ARID3CA6NKF2 412 aa13.17□□□□□ -0.3
AC007879.2-201ENST00000454444 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
AC007879.2-201ENST00000454444 CD109Q6YHK3 1445 aa13.16□□□□□ -0.3
AC007879.2-201ENST00000454444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
AC007879.2-201ENST00000454444 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
AC007879.2-201ENST00000454444 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
AC007879.2-201ENST00000454444 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
AC007879.2-201ENST00000454444 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
AC007879.2-201ENST00000454444 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
AC007879.2-201ENST00000454444 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
AC007879.2-201ENST00000454444 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
AC007879.2-201ENST00000454444 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
AC007879.2-201ENST00000454444 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
AC007879.2-201ENST00000454444 ABCA8O94911 1581 aa13.09□□□□□ -0.31
AC007879.2-201ENST00000454444 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.31
AC007879.2-201ENST00000454444 ATP10BO94823 1461 aa13.04□□□□□ -0.32
AC007879.2-201ENST00000454444 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
AC007879.2-201ENST00000454444 PHLDB1Q86UU1 1377 aa13.04□□□□□ -0.32
AC007879.2-201ENST00000454444 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
AC007879.2-201ENST00000454444 EEA1Q15075 1411 aa13.03□□□□□ -0.32
AC007879.2-201ENST00000454444 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
AC007879.2-201ENST00000454444 RAPGEF3O95398 923 aa13□□□□□ -0.33
AC007879.2-201ENST00000454444 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
AC007879.2-201ENST00000454444 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
AC007879.2-201ENST00000454444 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
AC007879.2-201ENST00000454444 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
AC007879.2-201ENST00000454444 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
AC007879.2-201ENST00000454444 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.34
AC007879.2-201ENST00000454444 NEO1Q92859 1461 aa12.95□□□□□ -0.34
AC007879.2-201ENST00000454444 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
AC007879.2-201ENST00000454444 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
AC007879.2-201ENST00000454444 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
AC007879.2-201ENST00000454444 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
AC007879.2-201ENST00000454444 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
AC007879.2-201ENST00000454444 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
AC007879.2-201ENST00000454444 KIF21BO75037 1637 aa12.9□□□□□ -0.34
AC007879.2-201ENST00000454444 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
AC007879.2-201ENST00000454444 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
AC007879.2-201ENST00000454444 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
AC007879.2-201ENST00000454444 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
AC007879.2-201ENST00000454444 FANCAO15360 1455 aa12.86□□□□□ -0.35
AC007879.2-201ENST00000454444 PTPRMP28827 1452 aa12.86□□□□□ -0.35
AC007879.2-201ENST00000454444 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
AC007879.2-201ENST00000454444 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
AC007879.2-201ENST00000454444 MLECQ14165 292 aa12.84□□□□□ -0.35
AC007879.2-201ENST00000454444 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
AC007879.2-201ENST00000454444 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
AC007879.2-201ENST00000454444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
AC007879.2-201ENST00000454444 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
AC007879.2-201ENST00000454444 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
AC007879.2-201ENST00000454444 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
AC007879.2-201ENST00000454444 PLCH2O75038 1416 aa12.79□□□□□ -0.36
AC007879.2-201ENST00000454444 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
AC007879.2-201ENST00000454444 FBXO41Q8TF61 875 aa12.79□□□□□ -0.36
AC007879.2-201ENST00000454444 ADAMTSL3P82987 1691 aa12.79□□□□□ -0.36
AC007879.2-201ENST00000454444 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
AC007879.2-201ENST00000454444 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
AC007879.2-201ENST00000454444 CLIP1P30622 1438 aa12.77□□□□□ -0.37
AC007879.2-201ENST00000454444 ZFYVE16Q7Z3T8 1539 aa12.77□□□□□ -0.37
AC007879.2-201ENST00000454444 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.37
AC007879.2-201ENST00000454444 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
AC007879.2-201ENST00000454444 TTC37Q6PGP7 1564 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms