RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 CFAP43Q8NDM7 1665 aa27.42■■□□□ 1.98
MECP2-205ENST00000453960 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
MECP2-205ENST00000453960 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
MECP2-205ENST00000453960 HNRNPUL2Q1KMD3 747 aaKnown RBP27.37■■□□□ 1.97
MECP2-205ENST00000453960 PCF11O94913 1555 aaKnown RBP27.34■■□□□ 1.97
MECP2-205ENST00000453960 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
MECP2-205ENST00000453960 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
MECP2-205ENST00000453960 FYCO1Q9BQS8 1478 aa27.3■■□□□ 1.96
MECP2-205ENST00000453960 TDRD9Q8NDG6 1382 aaKnown RBP27.27■■□□□ 1.96
MECP2-205ENST00000453960 CCNB3Q8WWL7 1395 aa27.27■■□□□ 1.96
MECP2-205ENST00000453960 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
MECP2-205ENST00000453960 CASKIN1Q8WXD9 1431 aa27.26■■□□□ 1.95
MECP2-205ENST00000453960 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
MECP2-205ENST00000453960 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
MECP2-205ENST00000453960 FHOD3Q2V2M9 1422 aa27.21■■□□□ 1.95
MECP2-205ENST00000453960 DNAJC5Q9H3Z4 198 aa27.19■■□□□ 1.94
MECP2-205ENST00000453960 FMN1Q68DA7 1419 aa27.18■■□□□ 1.94
MECP2-205ENST00000453960 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
MECP2-205ENST00000453960 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
MECP2-205ENST00000453960 WDR62O43379 1518 aa27.16■■□□□ 1.94
MECP2-205ENST00000453960 DHX57Q6P158 1386 aaKnown RBP27.14■■□□□ 1.94
MECP2-205ENST00000453960 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
MECP2-205ENST00000453960 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
MECP2-205ENST00000453960 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
MECP2-205ENST00000453960 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
MECP2-205ENST00000453960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.07■■□□□ 1.92
MECP2-205ENST00000453960 LRRIQ1Q96JM4 1722 aa27.06■■□□□ 1.92
MECP2-205ENST00000453960 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
MECP2-205ENST00000453960 P3H3Q8IVL6 736 aa27.02■■□□□ 1.92
MECP2-205ENST00000453960 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
MECP2-205ENST00000453960 IQGAP2Q13576 1575 aa26.98■■□□□ 1.91
MECP2-205ENST00000453960 DIEXFQ68CQ4 756 aaKnown RBP26.94■■□□□ 1.9
MECP2-205ENST00000453960 UGGT2Q9NYU1 1516 aa26.92■■□□□ 1.9
MECP2-205ENST00000453960 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.9
MECP2-205ENST00000453960 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
MECP2-205ENST00000453960 RAB3GAP2Q9H2M9 1393 aa26.88■■□□□ 1.89
MECP2-205ENST00000453960 EHBP1L1Q8N3D4 1523 aa26.87■■□□□ 1.89
MECP2-205ENST00000453960 ARHGEF11O15085 1522 aa26.86■■□□□ 1.89
MECP2-205ENST00000453960 CCDC18Q5T9S5 1454 aa26.86■■□□□ 1.89
MECP2-205ENST00000453960 EIF4G3O43432 1585 aaKnown RBP26.85■■□□□ 1.89
MECP2-205ENST00000453960 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
MECP2-205ENST00000453960 SUPT6HQ7KZ85 1726 aaKnown RBP26.84■■□□□ 1.89
MECP2-205ENST00000453960 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
MECP2-205ENST00000453960 MAPKBP1O60336 1514 aa26.83■■□□□ 1.88
MECP2-205ENST00000453960 KIAA0586Q9BVV6 1533 aa26.79■■□□□ 1.88
MECP2-205ENST00000453960 MTUS2Q5JR59 1369 aa26.78■■□□□ 1.88
MECP2-205ENST00000453960 NCOA2Q15596 1464 aa26.78■■□□□ 1.88
MECP2-205ENST00000453960 ATP1B4Q9UN42 357 aaPredicted RBP26.76■■□□□ 1.88
MECP2-205ENST00000453960 MAGI3Q5TCQ9 1506 aa26.75■■□□□ 1.87
MECP2-205ENST00000453960 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
MECP2-205ENST00000453960 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
MECP2-205ENST00000453960 MYOM3Q5VTT5 1437 aa26.74■■□□□ 1.87
MECP2-205ENST00000453960 KIAA0556O60303 1618 aa26.72■■□□□ 1.87
MECP2-205ENST00000453960 ITGAEP38570 1179 aa26.71■■□□□ 1.87
MECP2-205ENST00000453960 EPRSP07814 1512 aaKnown RBP26.71■■□□□ 1.87
MECP2-205ENST00000453960 FAM50AQ14320 339 aaKnown RBP26.7■■□□□ 1.87
MECP2-205ENST00000453960 DISP1Q96F81 1524 aa26.7■■□□□ 1.87
MECP2-205ENST00000453960 TCOF1Q13428 1488 aaKnown RBP26.67■■□□□ 1.86
MECP2-205ENST00000453960 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
MECP2-205ENST00000453960 HFM1A2PYH4 1435 aa26.63■■□□□ 1.85
MECP2-205ENST00000453960 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
MECP2-205ENST00000453960 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
MECP2-205ENST00000453960 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
MECP2-205ENST00000453960 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
MECP2-205ENST00000453960 MIA2Q96PC5 1412 aa26.56■■□□□ 1.84
MECP2-205ENST00000453960 RAPGEF6Q8TEU7 1601 aa26.56■■□□□ 1.84
MECP2-205ENST00000453960 NUP160Q12769 1436 aa26.55■■□□□ 1.84
MECP2-205ENST00000453960 TIMELESSQ9UNS1 1208 aa26.53■■□□□ 1.84
MECP2-205ENST00000453960 AKNAQ7Z591 1439 aa26.53■■□□□ 1.84
MECP2-205ENST00000453960 NAIPQ13075 1403 aa26.52■■□□□ 1.84
MECP2-205ENST00000453960 NUP153P49790 1475 aaKnown RBP26.51■■□□□ 1.84
MECP2-205ENST00000453960 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
MECP2-205ENST00000453960 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
MECP2-205ENST00000453960 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
MECP2-205ENST00000453960 MIER1Q8N108 512 aa26.39■■□□□ 1.82
MECP2-205ENST00000453960 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.81
MECP2-205ENST00000453960 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
MECP2-205ENST00000453960 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
MECP2-205ENST00000453960 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
MECP2-205ENST00000453960 NEUROD1Q13562 356 aa26.34■■□□□ 1.81
MECP2-205ENST00000453960 DNMT1P26358 1616 aaKnown RBP26.33■■□□□ 1.81
MECP2-205ENST00000453960 CARMIL2Q6F5E8 1435 aa26.33■■□□□ 1.81
MECP2-205ENST00000453960 SIN3AQ96ST3 1273 aa26.33■■□□□ 1.81
MECP2-205ENST00000453960 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
MECP2-205ENST00000453960 ABCA8O94911 1581 aa26.3■■□□□ 1.8
MECP2-205ENST00000453960 ROCK1Q13464 1354 aa26.29■■□□□ 1.8
MECP2-205ENST00000453960 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
MECP2-205ENST00000453960 PLB1Q6P1J6 1458 aa26.27■■□□□ 1.8
MECP2-205ENST00000453960 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
MECP2-205ENST00000453960 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
MECP2-205ENST00000453960 PPP1R15AO75807 674 aaPredicted RBP26.25■■□□□ 1.79
MECP2-205ENST00000453960 DENND4BO75064 1496 aaPredicted RBP26.25■■□□□ 1.79
MECP2-205ENST00000453960 KDM6BO15054 1643 aa26.24■■□□□ 1.79
MECP2-205ENST00000453960 DAPK1P53355 1430 aa26.24■■□□□ 1.79
MECP2-205ENST00000453960 ABCC5O15440 1437 aa26.22■■□□□ 1.79
MECP2-205ENST00000453960 KDM5BQ9UGL1 1544 aa26.21■■□□□ 1.79
MECP2-205ENST00000453960 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
MECP2-205ENST00000453960 KIF14Q15058 1648 aa26.18■■□□□ 1.78
MECP2-205ENST00000453960 GPATCH8Q9UKJ3 1502 aaKnown RBP26.17■■□□□ 1.78
MECP2-205ENST00000453960 CROCC2H7BZ55 1655 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms