RNA–Protein interactions for RNA: ENST00000453698.5

SNHG11-213, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 5

Gene SNHG11, Length 1,322 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-213ENST00000453698 JPH4Q96JJ6 628 aa30■■■□□ 2.39
SNHG11-213ENST00000453698 KIAA0586Q9BVV6 1533 aa29.98■■■□□ 2.39
SNHG11-213ENST00000453698 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
SNHG11-213ENST00000453698 RAPGEF2Q9Y4G8 1499 aa29.85■■■□□ 2.37
SNHG11-213ENST00000453698 IQGAP2Q13576 1575 aa29.74■■■□□ 2.35
SNHG11-213ENST00000453698 TRHP20396 242 aaPredicted RBP29.73■■■□□ 2.35
SNHG11-213ENST00000453698 PRXQ9BXM0 1461 aa29.73■■■□□ 2.35
SNHG11-213ENST00000453698 CARMIL2Q6F5E8 1435 aa29.63■■■□□ 2.33
SNHG11-213ENST00000453698 UGGT2Q9NYU1 1516 aa29.61■■■□□ 2.33
SNHG11-213ENST00000453698 CSRNP3Q8WYN3 585 aa29.6■■■□□ 2.33
SNHG11-213ENST00000453698 EEA1Q15075 1411 aa29.59■■■□□ 2.33
SNHG11-213ENST00000453698 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
SNHG11-213ENST00000453698 TNIKQ9UKE5 1360 aa29.57■■■□□ 2.32
SNHG11-213ENST00000453698 PTPRGP23470 1445 aa29.57■■■□□ 2.32
SNHG11-213ENST00000453698 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
SNHG11-213ENST00000453698 CTTNBP2Q8WZ74 1663 aa29.56■■■□□ 2.32
SNHG11-213ENST00000453698 ADCY10Q96PN6 1610 aa29.55■■■□□ 2.32
SNHG11-213ENST00000453698 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
SNHG11-213ENST00000453698 NPM1P06748 294 aaKnown RBP eCLIP29.44■■■□□ 2.3
SNHG11-213ENST00000453698 MAPKBP1O60336 1514 aa29.43■■■□□ 2.3
SNHG11-213ENST00000453698 TTBK1Q5TCY1 1321 aaPredicted RBP29.41■■■□□ 2.3
SNHG11-213ENST00000453698 UHRF1BP1LA0JNW5 1464 aa29.4■■■□□ 2.3
SNHG11-213ENST00000453698 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
SNHG11-213ENST00000453698 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
SNHG11-213ENST00000453698 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
SNHG11-213ENST00000453698 ABCC2Q92887 1545 aa29.35■■■□□ 2.29
SNHG11-213ENST00000453698 KIF13AQ9H1H9 1805 aa29.33■■■□□ 2.29
SNHG11-213ENST00000453698 ABCC10Q5T3U5 1492 aa29.32■■■□□ 2.28
SNHG11-213ENST00000453698 KIF21BO75037 1637 aa29.3■■■□□ 2.28
SNHG11-213ENST00000453698 DIP2BQ9P265 1576 aa29.26■■■□□ 2.27
SNHG11-213ENST00000453698 KDM5BQ9UGL1 1544 aa29.24■■■□□ 2.27
SNHG11-213ENST00000453698 FAM69CQ0P6D2 419 aa29.22■■■□□ 2.27
SNHG11-213ENST00000453698 PLB1Q6P1J6 1458 aa29.21■■■□□ 2.27
SNHG11-213ENST00000453698 SAMD9Q5K651 1589 aa29.21■■■□□ 2.27
SNHG11-213ENST00000453698 ABCA8O94911 1581 aa29.19■■■□□ 2.26
SNHG11-213ENST00000453698 ASXL2Q76L83 1435 aa29.19■■■□□ 2.26
SNHG11-213ENST00000453698 ZCCHC11Q5TAX3 1644 aaKnown RBP29.14■■■□□ 2.26
SNHG11-213ENST00000453698 P3H3Q8IVL6 736 aa29.13■■■□□ 2.25
SNHG11-213ENST00000453698 GLI2P10070 1586 aa29.06■■■□□ 2.24
SNHG11-213ENST00000453698 EPRSP07814 1512 aaKnown RBP29.02■■■□□ 2.24
SNHG11-213ENST00000453698 EFCAB5A4FU69 1503 aa29.01■■■□□ 2.23
SNHG11-213ENST00000453698 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
SNHG11-213ENST00000453698 RANGAP1P46060 587 aaPredicted RBP29■■■□□ 2.23
SNHG11-213ENST00000453698 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
SNHG11-213ENST00000453698 WDR7Q9Y4E6 1490 aa29■■■□□ 2.23
SNHG11-213ENST00000453698 EHMT2Q96KQ7 1210 aa28.97■■■□□ 2.23
SNHG11-213ENST00000453698 ATP10BO94823 1461 aa28.95■■■□□ 2.23
SNHG11-213ENST00000453698 RAPGEF6Q8TEU7 1601 aa28.95■■■□□ 2.22
SNHG11-213ENST00000453698 TSPOAP1O95153 1857 aa28.94■■■□□ 2.22
SNHG11-213ENST00000453698 PPRC1Q5VV67 1664 aaKnown RBP28.91■■■□□ 2.22
SNHG11-213ENST00000453698 MAP3K4Q9Y6R4 1608 aa28.91■■■□□ 2.22
SNHG11-213ENST00000453698 NUP153P49790 1475 aaKnown RBP28.88■■■□□ 2.21
SNHG11-213ENST00000453698 ARHGAP35Q9NRY4 1499 aa28.85■■■□□ 2.21
SNHG11-213ENST00000453698 ARID3CA6NKF2 412 aa28.85■■■□□ 2.21
SNHG11-213ENST00000453698 KDM6BO15054 1643 aa28.82■■■□□ 2.2
SNHG11-213ENST00000453698 KCNH8Q96L42 1107 aa28.8■■■□□ 2.2
SNHG11-213ENST00000453698 CFAP43Q8NDM7 1665 aa28.77■■■□□ 2.2
SNHG11-213ENST00000453698 TEX14Q8IWB6 1497 aa28.76■■■□□ 2.2
SNHG11-213ENST00000453698 CD109Q6YHK3 1445 aa28.75■■■□□ 2.19
SNHG11-213ENST00000453698 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
SNHG11-213ENST00000453698 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
SNHG11-213ENST00000453698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
SNHG11-213ENST00000453698 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
SNHG11-213ENST00000453698 COL17A1Q9UMD9 1497 aaPredicted RBP28.69■■■□□ 2.18
SNHG11-213ENST00000453698 ABCA9Q8IUA7 1624 aa28.68■■■□□ 2.18
SNHG11-213ENST00000453698 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
SNHG11-213ENST00000453698 CDK13Q14004 1512 aaKnown RBP28.62■■■□□ 2.17
SNHG11-213ENST00000453698 HECW1Q76N89 1606 aa28.62■■■□□ 2.17
SNHG11-213ENST00000453698 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SNHG11-213ENST00000453698 CLIP1P30622 1438 aa28.56■■■□□ 2.16
SNHG11-213ENST00000453698 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
SNHG11-213ENST00000453698 CASKIN1Q8WXD9 1431 aa28.51■■■□□ 2.15
SNHG11-213ENST00000453698 ARAP3Q8WWN8 1544 aa28.5■■■□□ 2.15
SNHG11-213ENST00000453698 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
SNHG11-213ENST00000453698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.5■■■□□ 2.15
SNHG11-213ENST00000453698 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
SNHG11-213ENST00000453698 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
SNHG11-213ENST00000453698 NEO1Q92859 1461 aa28.47■■■□□ 2.15
SNHG11-213ENST00000453698 CDK11AQ9UQ88 783 aaPredicted RBP28.44■■■□□ 2.14
SNHG11-213ENST00000453698 TTC37Q6PGP7 1564 aa28.44■■■□□ 2.14
SNHG11-213ENST00000453698 FYCO1Q9BQS8 1478 aa28.42■■■□□ 2.14
SNHG11-213ENST00000453698 CCDC18Q5T9S5 1454 aa28.41■■■□□ 2.14
SNHG11-213ENST00000453698 TROQ12816 1431 aaPredicted RBP28.4■■■□□ 2.14
SNHG11-213ENST00000453698 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
SNHG11-213ENST00000453698 FANCAO15360 1455 aa28.35■■■□□ 2.13
SNHG11-213ENST00000453698 PLCH2O75038 1416 aa28.34■■■□□ 2.13
SNHG11-213ENST00000453698 KIF14Q15058 1648 aa28.34■■■□□ 2.13
SNHG11-213ENST00000453698 KDM4FA0A1W2PPD8 638 aa28.33■■■□□ 2.13
SNHG11-213ENST00000453698 CFAP74Q9C0B2 1584 aa28.32■■■□□ 2.12
SNHG11-213ENST00000453698 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
SNHG11-213ENST00000453698 AKNAQ7Z591 1439 aa28.32■■■□□ 2.12
SNHG11-213ENST00000453698 RAPGEF3O95398 923 aa28.3■■■□□ 2.12
SNHG11-213ENST00000453698 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
SNHG11-213ENST00000453698 MYO5CQ9NQX4 1742 aa28.25■■■□□ 2.11
SNHG11-213ENST00000453698 DENND4BO75064 1496 aaPredicted RBP28.25■■■□□ 2.11
SNHG11-213ENST00000453698 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
SNHG11-213ENST00000453698 ADGRL1O94910 1474 aa28.21■■■□□ 2.11
SNHG11-213ENST00000453698 EFCAB2Q5VUJ9 269 aa28.2■■■□□ 2.11
SNHG11-213ENST00000453698 SCAPERQ9BY12 1400 aa28.16■■■□□ 2.1
SNHG11-213ENST00000453698 ZMYM4Q5VZL5 1548 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms