RNA–Protein interactions for RNA: ENST00000453447.6

SPIRE1-206, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5 BASIC

Gene SPIRE1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-206ENST00000453447 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
SPIRE1-206ENST00000453447 DIP2BQ9P265 1576 aa10.62□□□□□ -0.71
SPIRE1-206ENST00000453447 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPIRE1-206ENST00000453447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
SPIRE1-206ENST00000453447 ANP32EQ9BTT0 268 aa10.61□□□□□ -0.71
SPIRE1-206ENST00000453447 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
SPIRE1-206ENST00000453447 CFTRP13569 1480 aa10.6□□□□□ -0.71
SPIRE1-206ENST00000453447 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
SPIRE1-206ENST00000453447 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
SPIRE1-206ENST00000453447 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
SPIRE1-206ENST00000453447 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
SPIRE1-206ENST00000453447 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
SPIRE1-206ENST00000453447 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
SPIRE1-206ENST00000453447 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
SPIRE1-206ENST00000453447 SNAPC4Q5SXM2 1469 aa10.5□□□□□ -0.73
SPIRE1-206ENST00000453447 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
SPIRE1-206ENST00000453447 PCF11O94913 1555 aaKnown RBP10.48□□□□□ -0.73
SPIRE1-206ENST00000453447 MROH2BQ7Z745 1585 aa10.48□□□□□ -0.73
SPIRE1-206ENST00000453447 YTHDC1Q96MU7 727 aaKnown RBP10.48□□□□□ -0.73
SPIRE1-206ENST00000453447 MAGI1Q96QZ7 1491 aaPredicted RBP10.47□□□□□ -0.73
SPIRE1-206ENST00000453447 MIER1Q8N108 512 aa10.46□□□□□ -0.73
SPIRE1-206ENST00000453447 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.74
SPIRE1-206ENST00000453447 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.74
SPIRE1-206ENST00000453447 ABCC8Q09428 1581 aa10.45□□□□□ -0.74
SPIRE1-206ENST00000453447 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
SPIRE1-206ENST00000453447 WDR97A6NE52 1622 aa10.43□□□□□ -0.74
SPIRE1-206ENST00000453447 CEP170Q5SW79 1584 aa10.4□□□□□ -0.74
SPIRE1-206ENST00000453447 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
SPIRE1-206ENST00000453447 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
SPIRE1-206ENST00000453447 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
SPIRE1-206ENST00000453447 COL17A1Q9UMD9 1497 aaPredicted RBP10.37□□□□□ -0.75
SPIRE1-206ENST00000453447 PTPRMP28827 1452 aa10.36□□□□□ -0.75
SPIRE1-206ENST00000453447 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
SPIRE1-206ENST00000453447 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
SPIRE1-206ENST00000453447 MED1Q15648 1581 aaPredicted RBP10.34□□□□□ -0.75
SPIRE1-206ENST00000453447 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
SPIRE1-206ENST00000453447 WIZO95785 1651 aa10.32□□□□□ -0.76
SPIRE1-206ENST00000453447 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
SPIRE1-206ENST00000453447 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
SPIRE1-206ENST00000453447 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
SPIRE1-206ENST00000453447 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
SPIRE1-206ENST00000453447 ADAMTSL3P82987 1691 aa10.3□□□□□ -0.76
SPIRE1-206ENST00000453447 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
SPIRE1-206ENST00000453447 GLI2P10070 1586 aa10.29□□□□□ -0.76
SPIRE1-206ENST00000453447 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
SPIRE1-206ENST00000453447 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
SPIRE1-206ENST00000453447 EEA1Q15075 1411 aa10.25□□□□□ -0.77
SPIRE1-206ENST00000453447 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
SPIRE1-206ENST00000453447 RAD54L2Q9Y4B4 1467 aa10.24□□□□□ -0.77
SPIRE1-206ENST00000453447 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
SPIRE1-206ENST00000453447 EHMT2Q96KQ7 1210 aa10.24□□□□□ -0.77
SPIRE1-206ENST00000453447 HSPA2P54652 639 aa10.23□□□□□ -0.77
SPIRE1-206ENST00000453447 KIF21BO75037 1637 aa10.23□□□□□ -0.77
SPIRE1-206ENST00000453447 NUP160Q12769 1436 aa10.23□□□□□ -0.77
SPIRE1-206ENST00000453447 SOGA1O94964 1423 aa10.21□□□□□ -0.77
SPIRE1-206ENST00000453447 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.78
SPIRE1-206ENST00000453447 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
SPIRE1-206ENST00000453447 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
SPIRE1-206ENST00000453447 RBM19Q9Y4C8 960 aaKnown RBP10.18□□□□□ -0.78
SPIRE1-206ENST00000453447 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
SPIRE1-206ENST00000453447 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
SPIRE1-206ENST00000453447 FANCIQ9NVI1 1328 aa10.16□□□□□ -0.78
SPIRE1-206ENST00000453447 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
SPIRE1-206ENST00000453447 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
SPIRE1-206ENST00000453447 CCDC88BA6NC98 1476 aa10.15□□□□□ -0.78
SPIRE1-206ENST00000453447 GOLGA3Q08378 1498 aa10.15□□□□□ -0.78
SPIRE1-206ENST00000453447 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
SPIRE1-206ENST00000453447 LTBP4Q8N2S1 1624 aa10.14□□□□□ -0.79
SPIRE1-206ENST00000453447 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
SPIRE1-206ENST00000453447 MADDQ8WXG6 1647 aa10.12□□□□□ -0.79
SPIRE1-206ENST00000453447 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
SPIRE1-206ENST00000453447 BCORL1Q5H9F3 1711 aa10.11□□□□□ -0.79
SPIRE1-206ENST00000453447 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
SPIRE1-206ENST00000453447 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
SPIRE1-206ENST00000453447 STRCQ7RTU9 1775 aa10.09□□□□□ -0.79
SPIRE1-206ENST00000453447 PTPRTO14522 1441 aa10.09□□□□□ -0.79
SPIRE1-206ENST00000453447 MSH5O43196 834 aa10.09□□□□□ -0.79
SPIRE1-206ENST00000453447 NEFLP07196 543 aa10.08□□□□□ -0.8
SPIRE1-206ENST00000453447 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
SPIRE1-206ENST00000453447 FKBP8Q14318 412 aa10.07□□□□□ -0.8
SPIRE1-206ENST00000453447 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
SPIRE1-206ENST00000453447 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
SPIRE1-206ENST00000453447 RIMS1Q86UR5 1692 aaKnown RBP10.05□□□□□ -0.8
SPIRE1-206ENST00000453447 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
SPIRE1-206ENST00000453447 CFAP43Q8NDM7 1665 aa10.04□□□□□ -0.8
SPIRE1-206ENST00000453447 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
SPIRE1-206ENST00000453447 FGD5Q6ZNL6 1462 aa10.03□□□□□ -0.8
SPIRE1-206ENST00000453447 EPRSP07814 1512 aaKnown RBP10.03□□□□□ -0.8
SPIRE1-206ENST00000453447 UBAP1LF5GYI3 381 aa10.03□□□□□ -0.8
SPIRE1-206ENST00000453447 BCANQ96GW7 911 aa10.03□□□□□ -0.8
SPIRE1-206ENST00000453447 CLIP1P30622 1438 aa10.02□□□□□ -0.8
SPIRE1-206ENST00000453447 ADAMTS12P58397 1594 aa10.02□□□□□ -0.81
SPIRE1-206ENST00000453447 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
SPIRE1-206ENST00000453447 HSPA1LP34931 641 aa10.01□□□□□ -0.81
SPIRE1-206ENST00000453447 ABCC2Q92887 1545 aa10□□□□□ -0.81
SPIRE1-206ENST00000453447 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
SPIRE1-206ENST00000453447 DEKP35659 375 aaKnown RBP9.98□□□□□ -0.81
SPIRE1-206ENST00000453447 CCER2I3L3R5 266 aa9.98□□□□□ -0.81
SPIRE1-206ENST00000453447 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
SPIRE1-206ENST00000453447 RGS17Q9UGC6 210 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms