RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 TSPY10P0CW01 314 aa4.87□□□□□ -1.63
ATM-203ENST00000452508 ZNF777Q9ULD5 760 aaPredicted RBP4.87□□□□□ -1.63
ATM-203ENST00000452508 CC2D2AQ9P2K1 1620 aa4.87□□□□□ -1.63
ATM-203ENST00000452508 PLEKHD1A6NEE1 506 aa4.86□□□□□ -1.63
ATM-203ENST00000452508 EIF4G2P78344 907 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATM-203ENST00000452508 NCAPD3P42695 1498 aa4.86□□□□□ -1.63
ATM-203ENST00000452508 FANCD2Q9BXW9 1451 aa4.86□□□□□ -1.63
ATM-203ENST00000452508 TDRD9Q8NDG6 1382 aaKnown RBP4.86□□□□□ -1.63
ATM-203ENST00000452508 AEBP2Q6ZN18 517 aaPredicted RBP4.85□□□□□ -1.63
ATM-203ENST00000452508 POLR3GLQ9BT43 218 aa4.85□□□□□ -1.63
ATM-203ENST00000452508 RUSC2Q8N2Y8 1516 aa4.85□□□□□ -1.63
ATM-203ENST00000452508 HAP1P54257 671 aaPredicted RBP4.85□□□□□ -1.63
ATM-203ENST00000452508 NESP48681 1621 aa4.85□□□□□ -1.63
ATM-203ENST00000452508 HMGXB3Q12766 1538 aa4.85□□□□□ -1.63
ATM-203ENST00000452508 ANO8Q9HCE9 1232 aaPredicted RBP4.85□□□□□ -1.63
ATM-203ENST00000452508 HMGB2P26583 209 aaKnown RBP4.84□□□□□ -1.63
ATM-203ENST00000452508 C14orf37Q86TY3 774 aa4.84□□□□□ -1.63
ATM-203ENST00000452508 TRHP20396 242 aaPredicted RBP4.84□□□□□ -1.64
ATM-203ENST00000452508 HRCP23327 699 aa4.83□□□□□ -1.64
ATM-203ENST00000452508 DNAJC5BQ9UF47 199 aa4.83□□□□□ -1.64
ATM-203ENST00000452508 CDCA8Q53HL2 280 aa4.83□□□□□ -1.64
ATM-203ENST00000452508 CARMIL1Q5VZK9 1371 aa4.82□□□□□ -1.64
ATM-203ENST00000452508 CCDC18Q5T9S5 1454 aa4.82□□□□□ -1.64
ATM-203ENST00000452508 FMN1Q68DA7 1419 aa4.82□□□□□ -1.64
ATM-203ENST00000452508 TNIKQ9UKE5 1360 aa4.81□□□□□ -1.64
ATM-203ENST00000452508 CFAP44Q96MT7 982 aa4.81□□□□□ -1.64
ATM-203ENST00000452508 CANXP27824 592 aaKnown RBP4.81□□□□□ -1.64
ATM-203ENST00000452508 RAD54L2Q9Y4B4 1467 aa4.81□□□□□ -1.64
ATM-203ENST00000452508 CNGB1Q14028 1251 aaPredicted RBP4.81□□□□□ -1.64
ATM-203ENST00000452508 ANP32BQ92688 251 aaKnown RBP4.81□□□□□ -1.64
ATM-203ENST00000452508 CHIC2Q9UKJ5 165 aa4.8□□□□□ -1.64
ATM-203ENST00000452508 TONSLQ96HA7 1378 aa4.8□□□□□ -1.64
ATM-203ENST00000452508 DCAF8L1A6NGE4 600 aa4.8□□□□□ -1.64
ATM-203ENST00000452508 ZNF316A6NFI3 1004 aaPredicted RBP4.8□□□□□ -1.64
ATM-203ENST00000452508 CHMP4AQ9BY43 222 aa4.8□□□□□ -1.64
ATM-203ENST00000452508 FGD5Q6ZNL6 1462 aa4.8□□□□□ -1.64
ATM-203ENST00000452508 TRIM44Q96DX7 344 aaPredicted RBP4.79□□□□□ -1.64
ATM-203ENST00000452508 KCNH8Q96L42 1107 aa4.79□□□□□ -1.64
ATM-203ENST00000452508 GTF3C3Q9Y5Q9 886 aa4.79□□□□□ -1.64
ATM-203ENST00000452508 ANP32AP39687 249 aaKnown RBP4.79□□□□□ -1.64
ATM-203ENST00000452508 LAMC3Q9Y6N6 1575 aa4.79□□□□□ -1.64
ATM-203ENST00000452508 ZNF326Q5BKZ1 582 aaKnown RBP4.79□□□□□ -1.64
ATM-203ENST00000452508 ERICH6BQ5W0A0 696 aa4.79□□□□□ -1.64
ATM-203ENST00000452508 EIF3AQ14152 1382 aaKnown RBP4.78□□□□□ -1.64
ATM-203ENST00000452508 CFTRP13569 1480 aa4.78□□□□□ -1.64
ATM-203ENST00000452508 MRC2Q9UBG0 1479 aa4.78□□□□□ -1.64
ATM-203ENST00000452508 CCNB3Q8WWL7 1395 aa4.78□□□□□ -1.64
ATM-203ENST00000452508 USP35Q9P2H5 1018 aa4.78□□□□□ -1.64
ATM-203ENST00000452508 RAPGEF2Q9Y4G8 1499 aa4.78□□□□□ -1.64
ATM-203ENST00000452508 UACAQ9BZF9 1416 aa4.78□□□□□ -1.65
ATM-203ENST00000452508 PKNOX2Q96KN3 472 aa4.77□□□□□ -1.65
ATM-203ENST00000452508 PRDM2Q13029 1718 aa4.77□□□□□ -1.65
ATM-203ENST00000452508 SYNJ1O43426 1573 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 CHGAP10645 457 aaKnown RBP4.76□□□□□ -1.65
ATM-203ENST00000452508 PNNQ9H307 717 aaKnown RBP4.76□□□□□ -1.65
ATM-203ENST00000452508 WASHC2AQ641Q2 1341 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 CFDP1Q9UEE9 299 aaPredicted RBP4.76□□□□□ -1.65
ATM-203ENST00000452508 RSPH4AQ5TD94 716 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 POGZQ7Z3K3 1410 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 TIMELESSQ9UNS1 1208 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 OSCARQ8IYS5 282 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 TMX4Q9H1E5 349 aaPredicted RBP4.76□□□□□ -1.65
ATM-203ENST00000452508 MYH16Q9H6N6 1097 aa4.76□□□□□ -1.65
ATM-203ENST00000452508 A0A0U1RQG5 324 aaPredicted RBP4.75□□□□□ -1.65
ATM-203ENST00000452508 AQRO60306 1485 aaKnown RBP eCLIP4.75□□□□□ -1.655e-9■□□□□ 8.2
ATM-203ENST00000452508 PTMSP20962 102 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 PLPPR3Q6T4P5 718 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 CUX1P39880 1505 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 CHMP4BQ9H444 224 aaKnown RBP4.75□□□□□ -1.65
ATM-203ENST00000452508 CFAP53Q96M91 514 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 CUL7Q14999 1698 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 ANP32CO43423 234 aa4.75□□□□□ -1.65
ATM-203ENST00000452508 ARHGAP35Q9NRY4 1499 aa4.74□□□□□ -1.65
ATM-203ENST00000452508 FHOD3Q2V2M9 1422 aa4.74□□□□□ -1.65
ATM-203ENST00000452508 UNC13AQ9UPW8 1703 aa4.74□□□□□ -1.65
ATM-203ENST00000452508 IFT140Q96RY7 1462 aa4.74□□□□□ -1.65
ATM-203ENST00000452508 EID1Q9Y6B2 187 aa4.74□□□□□ -1.65
ATM-203ENST00000452508 CDK11BP21127 795 aaKnown RBP4.74□□□□□ -1.65
ATM-203ENST00000452508 BCL11AQ9H165 835 aa4.73□□□□□ -1.65
ATM-203ENST00000452508 IGF1RP08069 1367 aa4.73□□□□□ -1.65
ATM-203ENST00000452508 KANK4Q5T7N3 995 aaPredicted RBP4.73□□□□□ -1.65
ATM-203ENST00000452508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.73□□□□□ -1.653e-7■■□□□ 13.6
ATM-203ENST00000452508 RRP7BPQ9NSQ0 103 aa4.73□□□□□ -1.65
ATM-203ENST00000452508 HMGB3O15347 200 aaKnown RBP4.73□□□□□ -1.65
ATM-203ENST00000452508 NPHP1O15259 732 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 PEG3Q9GZU2 1588 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 POLA1P09884 1462 aaPredicted RBP4.72□□□□□ -1.65
ATM-203ENST00000452508 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.72□□□□□ -1.65
ATM-203ENST00000452508 EFCAB2Q5VUJ9 269 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 TNNT2P45379 298 aaPredicted RBP4.72□□□□□ -1.65
ATM-203ENST00000452508 UPF2Q9HAU5 1272 aaKnown RBP4.72□□□□□ -1.65
ATM-203ENST00000452508 GAPVD1Q14C86 1478 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 GRIN2BQ13224 1484 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 WDR97A6NE52 1622 aa4.72□□□□□ -1.65
ATM-203ENST00000452508 LAS1LQ9Y4W2 734 aaKnown RBP4.71□□□□□ -1.65
ATM-203ENST00000452508 IL27Q8NEV9 243 aa4.71□□□□□ -1.65
ATM-203ENST00000452508 TOPBP1Q92547 1522 aa4.71□□□□□ -1.66
ATM-203ENST00000452508 DNMBPQ6XZF7 1577 aa4.71□□□□□ -1.66
ATM-203ENST00000452508 PLEKHH2Q8IVE3 1493 aa4.71□□□□□ -1.66
ATM-203ENST00000452508 VPS8Q8N3P4 1428 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms