RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NEFLP07196 543 aa15.92■□□□□ 0.14
DDR1-239ENST00000452441 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
DDR1-239ENST00000452441 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
DDR1-239ENST00000452441 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
DDR1-239ENST00000452441 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
DDR1-239ENST00000452441 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
DDR1-239ENST00000452441 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
DDR1-239ENST00000452441 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
DDR1-239ENST00000452441 MYT1Q01538 1121 aa15.84■□□□□ 0.13
DDR1-239ENST00000452441 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.13
DDR1-239ENST00000452441 FKBP8Q14318 412 aa15.82■□□□□ 0.12
DDR1-239ENST00000452441 IGF1RP08069 1367 aa15.82■□□□□ 0.12
DDR1-239ENST00000452441 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
DDR1-239ENST00000452441 RRP7BPQ9NSQ0 103 aa15.81■□□□□ 0.12
DDR1-239ENST00000452441 CLSPNQ9HAW4 1339 aa15.8■□□□□ 0.12
DDR1-239ENST00000452441 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
DDR1-239ENST00000452441 ANP32CO43423 234 aa15.76■□□□□ 0.11
DDR1-239ENST00000452441 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
DDR1-239ENST00000452441 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
DDR1-239ENST00000452441 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
DDR1-239ENST00000452441 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
DDR1-239ENST00000452441 NESP48681 1621 aa15.72■□□□□ 0.11
DDR1-239ENST00000452441 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
DDR1-239ENST00000452441 FHOD3Q2V2M9 1422 aa15.71■□□□□ 0.11
DDR1-239ENST00000452441 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
DDR1-239ENST00000452441 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
DDR1-239ENST00000452441 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
DDR1-239ENST00000452441 FOXD1Q16676 465 aa15.67■□□□□ 0.1
DDR1-239ENST00000452441 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDR1-239ENST00000452441 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
DDR1-239ENST00000452441 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
DDR1-239ENST00000452441 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
DDR1-239ENST00000452441 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
DDR1-239ENST00000452441 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
DDR1-239ENST00000452441 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
DDR1-239ENST00000452441 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
DDR1-239ENST00000452441 SALL2Q9Y467 1007 aaPredicted RBP15.63■□□□□ 0.09
DDR1-239ENST00000452441 LRRC9Q6ZRR7 1453 aa15.6■□□□□ 0.09
DDR1-239ENST00000452441 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
DDR1-239ENST00000452441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDR1-239ENST00000452441 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
DDR1-239ENST00000452441 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
DDR1-239ENST00000452441 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
DDR1-239ENST00000452441 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
DDR1-239ENST00000452441 KDM2AQ9Y2K7 1162 aa15.55■□□□□ 0.08
DDR1-239ENST00000452441 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
DDR1-239ENST00000452441 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
DDR1-239ENST00000452441 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
DDR1-239ENST00000452441 TOPBP1Q92547 1522 aa15.54■□□□□ 0.08
DDR1-239ENST00000452441 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
DDR1-239ENST00000452441 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
DDR1-239ENST00000452441 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
DDR1-239ENST00000452441 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
DDR1-239ENST00000452441 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
DDR1-239ENST00000452441 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
DDR1-239ENST00000452441 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
DDR1-239ENST00000452441 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
DDR1-239ENST00000452441 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.071e-7■■■■■ 41.3
DDR1-239ENST00000452441 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
DDR1-239ENST00000452441 RGL3Q3MIN7 710 aa15.43■□□□□ 0.06
DDR1-239ENST00000452441 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
DDR1-239ENST00000452441 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
DDR1-239ENST00000452441 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
DDR1-239ENST00000452441 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
DDR1-239ENST00000452441 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
DDR1-239ENST00000452441 PTPRKQ15262 1439 aa15.4■□□□□ 0.06
DDR1-239ENST00000452441 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
DDR1-239ENST00000452441 TSPY4P0CV99 314 aa15.39■□□□□ 0.05
DDR1-239ENST00000452441 TSPY10P0CW01 314 aa15.39■□□□□ 0.05
DDR1-239ENST00000452441 FMN1Q68DA7 1419 aa15.38■□□□□ 0.05
DDR1-239ENST00000452441 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
DDR1-239ENST00000452441 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
DDR1-239ENST00000452441 CTTNBP2Q8WZ74 1663 aa15.37■□□□□ 0.05
DDR1-239ENST00000452441 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
DDR1-239ENST00000452441 EFCAB5A4FU69 1503 aa15.36■□□□□ 0.05
DDR1-239ENST00000452441 LRRIQ1Q96JM4 1722 aa15.35■□□□□ 0.05
DDR1-239ENST00000452441 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
DDR1-239ENST00000452441 ZNF644Q9H582 1327 aaPredicted RBP15.35■□□□□ 0.05
DDR1-239ENST00000452441 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.058e-8■■■■■ 39.6
DDR1-239ENST00000452441 CUL7Q14999 1698 aa15.35■□□□□ 0.05
DDR1-239ENST00000452441 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
DDR1-239ENST00000452441 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
DDR1-239ENST00000452441 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
DDR1-239ENST00000452441 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
DDR1-239ENST00000452441 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
DDR1-239ENST00000452441 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
DDR1-239ENST00000452441 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
DDR1-239ENST00000452441 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
DDR1-239ENST00000452441 CCER2I3L3R5 266 aa15.29■□□□□ 0.04
DDR1-239ENST00000452441 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
DDR1-239ENST00000452441 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
DDR1-239ENST00000452441 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
DDR1-239ENST00000452441 L3MBTL2Q969R5 705 aa15.27■□□□□ 0.04
DDR1-239ENST00000452441 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.04
DDR1-239ENST00000452441 SAMD9Q5K651 1589 aa15.27■□□□□ 0.03
DDR1-239ENST00000452441 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
DDR1-239ENST00000452441 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
DDR1-239ENST00000452441 RBM19Q9Y4C8 960 aaKnown RBP15.25■□□□□ 0.03
DDR1-239ENST00000452441 NAIPQ13075 1403 aa15.24■□□□□ 0.03
DDR1-239ENST00000452441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms