RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
ITGB4-203ENST00000450894 ARID3CA6NKF2 412 aa18.52■□□□□ 0.55
ITGB4-203ENST00000450894 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
ITGB4-203ENST00000450894 NCLP19338 710 aaKnown RBP18.5■□□□□ 0.55
ITGB4-203ENST00000450894 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
ITGB4-203ENST00000450894 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
ITGB4-203ENST00000450894 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
ITGB4-203ENST00000450894 PTMAP06454 111 aaKnown RBP18.45■□□□□ 0.54
ITGB4-203ENST00000450894 TIMELESSQ9UNS1 1208 aa18.45■□□□□ 0.54
ITGB4-203ENST00000450894 CDK11BP21127 795 aaKnown RBP18.44■□□□□ 0.54
ITGB4-203ENST00000450894 RBM19Q9Y4C8 960 aaKnown RBP18.43■□□□□ 0.54
ITGB4-203ENST00000450894 DNTTIP2Q5QJE6 756 aaKnown RBP18.43■□□□□ 0.54
ITGB4-203ENST00000450894 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
ITGB4-203ENST00000450894 FBLN2P98095 1184 aa18.42■□□□□ 0.54
ITGB4-203ENST00000450894 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
ITGB4-203ENST00000450894 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
ITGB4-203ENST00000450894 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
ITGB4-203ENST00000450894 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
ITGB4-203ENST00000450894 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
ITGB4-203ENST00000450894 MTUS2Q5JR59 1369 aa18.34■□□□□ 0.53
ITGB4-203ENST00000450894 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
ITGB4-203ENST00000450894 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
ITGB4-203ENST00000450894 HIRIP3Q9BW71 556 aaPredicted RBP18.26■□□□□ 0.51
ITGB4-203ENST00000450894 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
ITGB4-203ENST00000450894 ZRSR1Q15695 479 aaKnown RBP18.21■□□□□ 0.51
ITGB4-203ENST00000450894 PTMSP20962 102 aa18.2■□□□□ 0.5
ITGB4-203ENST00000450894 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
ITGB4-203ENST00000450894 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
ITGB4-203ENST00000450894 MSNP26038 577 aaKnown RBP18.19■□□□□ 0.5
ITGB4-203ENST00000450894 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
ITGB4-203ENST00000450894 CHAF1AQ13111 956 aaPredicted RBP18.17■□□□□ 0.5
ITGB4-203ENST00000450894 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
ITGB4-203ENST00000450894 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
ITGB4-203ENST00000450894 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
ITGB4-203ENST00000450894 MS4A1P11836 297 aa18.15■□□□□ 0.5
ITGB4-203ENST00000450894 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
ITGB4-203ENST00000450894 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
ITGB4-203ENST00000450894 GOLGA6L6A8MZA4 724 aa18.14■□□□□ 0.49
ITGB4-203ENST00000450894 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
ITGB4-203ENST00000450894 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
ITGB4-203ENST00000450894 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
ITGB4-203ENST00000450894 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
ITGB4-203ENST00000450894 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
ITGB4-203ENST00000450894 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
ITGB4-203ENST00000450894 RGS3P49796 1198 aa18.1■□□□□ 0.49
ITGB4-203ENST00000450894 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-203ENST00000450894 PLCB2Q00722 1185 aa18.09■□□□□ 0.49
ITGB4-203ENST00000450894 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
ITGB4-203ENST00000450894 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
ITGB4-203ENST00000450894 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
ITGB4-203ENST00000450894 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
ITGB4-203ENST00000450894 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
ITGB4-203ENST00000450894 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
ITGB4-203ENST00000450894 NRDCO43847 1150 aa18.06■□□□□ 0.48
ITGB4-203ENST00000450894 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
ITGB4-203ENST00000450894 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
ITGB4-203ENST00000450894 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
ITGB4-203ENST00000450894 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
ITGB4-203ENST00000450894 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
ITGB4-203ENST00000450894 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
ITGB4-203ENST00000450894 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
ITGB4-203ENST00000450894 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
ITGB4-203ENST00000450894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
ITGB4-203ENST00000450894 RRP7BPQ9NSQ0 103 aa18.04■□□□□ 0.48
ITGB4-203ENST00000450894 STAG3Q9UJ98 1225 aa18.03■□□□□ 0.48
ITGB4-203ENST00000450894 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
ITGB4-203ENST00000450894 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
ITGB4-203ENST00000450894 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
ITGB4-203ENST00000450894 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
ITGB4-203ENST00000450894 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
ITGB4-203ENST00000450894 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
ITGB4-203ENST00000450894 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
ITGB4-203ENST00000450894 GOLGA6L3A6NEY3 463 aa17.92■□□□□ 0.46
ITGB4-203ENST00000450894 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
ITGB4-203ENST00000450894 NACADO15069 1562 aa17.9■□□□□ 0.46
ITGB4-203ENST00000450894 TNNT3P45378 269 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-203ENST00000450894 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
ITGB4-203ENST00000450894 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-203ENST00000450894 RALBP1Q15311 655 aa17.89■□□□□ 0.45
ITGB4-203ENST00000450894 DRC7Q8IY82 874 aa17.88■□□□□ 0.45
ITGB4-203ENST00000450894 RCAN3Q9UKA8 241 aa17.88■□□□□ 0.45
ITGB4-203ENST00000450894 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
ITGB4-203ENST00000450894 PDE3BQ13370 1112 aa17.88■□□□□ 0.45
ITGB4-203ENST00000450894 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
ITGB4-203ENST00000450894 GOLGA6L4A6NEF3 574 aa17.87■□□□□ 0.45
ITGB4-203ENST00000450894 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
ITGB4-203ENST00000450894 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
ITGB4-203ENST00000450894 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
ITGB4-203ENST00000450894 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
ITGB4-203ENST00000450894 ARID3AQ99856 593 aa17.85■□□□□ 0.45
ITGB4-203ENST00000450894 TMF1P82094 1093 aa17.83■□□□□ 0.44
ITGB4-203ENST00000450894 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
ITGB4-203ENST00000450894 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
ITGB4-203ENST00000450894 MCCP23508 829 aa17.81■□□□□ 0.44
ITGB4-203ENST00000450894 GSE1Q14687 1217 aa17.81■□□□□ 0.44
ITGB4-203ENST00000450894 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
ITGB4-203ENST00000450894 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
ITGB4-203ENST00000450894 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
ITGB4-203ENST00000450894 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
ITGB4-203ENST00000450894 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms