RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
CHFR-205ENST00000450056 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
CHFR-205ENST00000450056 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHFR-205ENST00000450056 NBR1Q14596 966 aa19.7■□□□□ 0.74
CHFR-205ENST00000450056 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
CHFR-205ENST00000450056 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
CHFR-205ENST00000450056 KIF21BO75037 1637 aa19.67■□□□□ 0.74
CHFR-205ENST00000450056 NESP48681 1621 aa19.59■□□□□ 0.73
CHFR-205ENST00000450056 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
CHFR-205ENST00000450056 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
CHFR-205ENST00000450056 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
CHFR-205ENST00000450056 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
CHFR-205ENST00000450056 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
CHFR-205ENST00000450056 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
CHFR-205ENST00000450056 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
CHFR-205ENST00000450056 B4GALNT3Q6L9W6 998 aa19.53■□□□□ 0.72
CHFR-205ENST00000450056 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
CHFR-205ENST00000450056 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
CHFR-205ENST00000450056 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
CHFR-205ENST00000450056 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
CHFR-205ENST00000450056 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
CHFR-205ENST00000450056 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
CHFR-205ENST00000450056 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
CHFR-205ENST00000450056 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
CHFR-205ENST00000450056 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
CHFR-205ENST00000450056 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
CHFR-205ENST00000450056 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
CHFR-205ENST00000450056 RTN4Q9NQC3 1192 aaKnown RBP19.43■□□□□ 0.7
CHFR-205ENST00000450056 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
CHFR-205ENST00000450056 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
CHFR-205ENST00000450056 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
CHFR-205ENST00000450056 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
CHFR-205ENST00000450056 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
CHFR-205ENST00000450056 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
CHFR-205ENST00000450056 CUX2O14529 1486 aa19.37■□□□□ 0.69
CHFR-205ENST00000450056 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
CHFR-205ENST00000450056 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
CHFR-205ENST00000450056 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
CHFR-205ENST00000450056 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
CHFR-205ENST00000450056 PPP4R2Q9NY27 417 aa19.34■□□□□ 0.69
CHFR-205ENST00000450056 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CHFR-205ENST00000450056 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.69
CHFR-205ENST00000450056 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
CHFR-205ENST00000450056 ABCA10Q8WWZ4 1543 aa19.33■□□□□ 0.68
CHFR-205ENST00000450056 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
CHFR-205ENST00000450056 IGF1RP08069 1367 aa19.32■□□□□ 0.68
CHFR-205ENST00000450056 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
CHFR-205ENST00000450056 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
CHFR-205ENST00000450056 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
CHFR-205ENST00000450056 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
CHFR-205ENST00000450056 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
CHFR-205ENST00000450056 MYT1LQ9UL68 1186 aa19.26■□□□□ 0.67
CHFR-205ENST00000450056 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
CHFR-205ENST00000450056 CCDC184Q52MB2 194 aa19.25■□□□□ 0.67
CHFR-205ENST00000450056 MAPKBP1O60336 1514 aa19.23■□□□□ 0.67
CHFR-205ENST00000450056 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
CHFR-205ENST00000450056 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
CHFR-205ENST00000450056 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
CHFR-205ENST00000450056 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
CHFR-205ENST00000450056 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
CHFR-205ENST00000450056 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
CHFR-205ENST00000450056 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
CHFR-205ENST00000450056 PHLDB1Q86UU1 1377 aa19.16■□□□□ 0.66
CHFR-205ENST00000450056 IL27Q8NEV9 243 aa19.15■□□□□ 0.66
CHFR-205ENST00000450056 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
CHFR-205ENST00000450056 CHIC2Q9UKJ5 165 aa19.15■□□□□ 0.66
CHFR-205ENST00000450056 CUL7Q14999 1698 aa19.15■□□□□ 0.66
CHFR-205ENST00000450056 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
CHFR-205ENST00000450056 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
CHFR-205ENST00000450056 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
CHFR-205ENST00000450056 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
CHFR-205ENST00000450056 EIF4G2P78344 907 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHFR-205ENST00000450056 WDR62O43379 1518 aa19.07■□□□□ 0.64
CHFR-205ENST00000450056 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
CHFR-205ENST00000450056 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
CHFR-205ENST00000450056 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
CHFR-205ENST00000450056 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
CHFR-205ENST00000450056 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
CHFR-205ENST00000450056 IPO9Q96P70 1041 aaKnown RBP19.04■□□□□ 0.64
CHFR-205ENST00000450056 FOXD1Q16676 465 aa19.04■□□□□ 0.64
CHFR-205ENST00000450056 NEFMP07197 916 aa19.03■□□□□ 0.64
CHFR-205ENST00000450056 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
CHFR-205ENST00000450056 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
CHFR-205ENST00000450056 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
CHFR-205ENST00000450056 PBRM1Q86U86 1689 aa19■□□□□ 0.63
CHFR-205ENST00000450056 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
CHFR-205ENST00000450056 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
CHFR-205ENST00000450056 AKNAQ7Z591 1439 aa18.95■□□□□ 0.62
CHFR-205ENST00000450056 C11orf95C9JLR9 678 aaPredicted RBP18.94■□□□□ 0.62
CHFR-205ENST00000450056 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
CHFR-205ENST00000450056 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
CHFR-205ENST00000450056 ZBED9Q6R2W3 1325 aa18.91■□□□□ 0.62
CHFR-205ENST00000450056 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.621e-7■■■■■ 49.5
CHFR-205ENST00000450056 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
CHFR-205ENST00000450056 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
CHFR-205ENST00000450056 EFCAB5A4FU69 1503 aa18.89■□□□□ 0.61
CHFR-205ENST00000450056 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.61
CHFR-205ENST00000450056 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
CHFR-205ENST00000450056 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
CHFR-205ENST00000450056 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms