RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 CUL7Q14999 1698 aa37.64■■■■□ 3.62
CPSF7-208ENST00000450000 CARMIL1Q5VZK9 1371 aa37.61■■■■□ 3.61
CPSF7-208ENST00000450000 RUSC2Q8N2Y8 1516 aa37.59■■■■□ 3.61
CPSF7-208ENST00000450000 KIAA0586Q9BVV6 1533 aa37.55■■■■□ 3.6
CPSF7-208ENST00000450000 NPM1P06748 294 aaKnown RBP eCLIP37.47■■■■□ 3.59
CPSF7-208ENST00000450000 TTBK1Q5TCY1 1321 aaPredicted RBP37.32■■■■□ 3.56
CPSF7-208ENST00000450000 CARMIL2Q6F5E8 1435 aa37.3■■■■□ 3.56
CPSF7-208ENST00000450000 RAPGEF2Q9Y4G8 1499 aa37.27■■■■□ 3.56
CPSF7-208ENST00000450000 PTPRGP23470 1445 aa37.24■■■■□ 3.55
CPSF7-208ENST00000450000 IQGAP2Q13576 1575 aa37.21■■■■□ 3.55
CPSF7-208ENST00000450000 TNIKQ9UKE5 1360 aa37.17■■■■□ 3.54
CPSF7-208ENST00000450000 FAM69CQ0P6D2 419 aa37.14■■■■□ 3.54
CPSF7-208ENST00000450000 ADCY10Q96PN6 1610 aa37.1■■■■□ 3.53
CPSF7-208ENST00000450000 MAPKBP1O60336 1514 aa37.05■■■■□ 3.52
CPSF7-208ENST00000450000 ABCC10Q5T3U5 1492 aa37.02■■■■□ 3.52
CPSF7-208ENST00000450000 DISP1Q96F81 1524 aa36.95■■■■□ 3.51
CPSF7-208ENST00000450000 UGGT2Q9NYU1 1516 aa36.95■■■■□ 3.51
CPSF7-208ENST00000450000 KIF13AQ9H1H9 1805 aa36.94■■■■□ 3.5
CPSF7-208ENST00000450000 UACAQ9BZF9 1416 aa36.92■■■■□ 3.5
CPSF7-208ENST00000450000 ABCC2Q92887 1545 aa36.9■■■■□ 3.5
CPSF7-208ENST00000450000 PRXQ9BXM0 1461 aa36.88■■■■□ 3.49
CPSF7-208ENST00000450000 DIP2BQ9P265 1576 aa36.86■■■■□ 3.49
CPSF7-208ENST00000450000 CSRNP3Q8WYN3 585 aa36.85■■■■□ 3.49
CPSF7-208ENST00000450000 UHRF1BP1LA0JNW5 1464 aa36.84■■■■□ 3.49
CPSF7-208ENST00000450000 FAM9AQ8IZU1 332 aaPredicted RBP36.83■■■■□ 3.49
CPSF7-208ENST00000450000 KIAA0556O60303 1618 aa36.83■■■■□ 3.49
CPSF7-208ENST00000450000 GOLGA3Q08378 1498 aa36.82■■■■□ 3.49
CPSF7-208ENST00000450000 AEBP2Q6ZN18 517 aaPredicted RBP36.82■■■■□ 3.48
CPSF7-208ENST00000450000 CTTNBP2Q8WZ74 1663 aa36.8■■■■□ 3.48
CPSF7-208ENST00000450000 PLB1Q6P1J6 1458 aa36.78■■■■□ 3.48
CPSF7-208ENST00000450000 ASXL2Q76L83 1435 aa36.76■■■■□ 3.48
CPSF7-208ENST00000450000 EEA1Q15075 1411 aa36.7■■■■□ 3.47
CPSF7-208ENST00000450000 KDM5BQ9UGL1 1544 aa36.65■■■■□ 3.46
CPSF7-208ENST00000450000 P3H3Q8IVL6 736 aa36.61■■■■□ 3.45
CPSF7-208ENST00000450000 TSPOAP1O95153 1857 aa36.6■■■■□ 3.45
CPSF7-208ENST00000450000 KDM6BO15054 1643 aa36.55■■■■□ 3.44
CPSF7-208ENST00000450000 ZCCHC11Q5TAX3 1644 aaKnown RBP36.55■■■■□ 3.44
CPSF7-208ENST00000450000 GLI2P10070 1586 aa36.54■■■■□ 3.44
CPSF7-208ENST00000450000 EPRSP07814 1512 aaKnown RBP36.51■■■■□ 3.44
CPSF7-208ENST00000450000 RANGAP1P46060 587 aaPredicted RBP36.51■■■■□ 3.44
CPSF7-208ENST00000450000 WDR7Q9Y4E6 1490 aa36.46■■■■□ 3.43
CPSF7-208ENST00000450000 ABCA8O94911 1581 aa36.45■■■■□ 3.43
CPSF7-208ENST00000450000 KCNH8Q96L42 1107 aa36.45■■■■□ 3.43
CPSF7-208ENST00000450000 ARID3CA6NKF2 412 aa36.41■■■■□ 3.42
CPSF7-208ENST00000450000 CHIC1Q5VXU3 224 aa36.39■■■■□ 3.42
CPSF7-208ENST00000450000 TEX14Q8IWB6 1497 aa36.38■■■■□ 3.41
CPSF7-208ENST00000450000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
CPSF7-208ENST00000450000 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
CPSF7-208ENST00000450000 EHMT2Q96KQ7 1210 aa36.3■■■■□ 3.4
CPSF7-208ENST00000450000 MAP3K4Q9Y6R4 1608 aa36.3■■■■□ 3.4
CPSF7-208ENST00000450000 SAMD9Q5K651 1589 aa36.29■■■■□ 3.4
CPSF7-208ENST00000450000 UBTFP17480 764 aaKnown RBP36.28■■■■□ 3.4
CPSF7-208ENST00000450000 PPRC1Q5VV67 1664 aaKnown RBP36.27■■■■□ 3.4
CPSF7-208ENST00000450000 CD109Q6YHK3 1445 aa36.26■■■■□ 3.4
CPSF7-208ENST00000450000 KIF21BO75037 1637 aa36.25■■■■□ 3.39
CPSF7-208ENST00000450000 ATP10BO94823 1461 aa36.22■■■■□ 3.39
CPSF7-208ENST00000450000 FHOD3Q2V2M9 1422 aa36.2■■■■□ 3.39
CPSF7-208ENST00000450000 RAPGEF6Q8TEU7 1601 aa36.16■■■■□ 3.38
CPSF7-208ENST00000450000 MAGI3Q5TCQ9 1506 aa36.13■■■■□ 3.37
CPSF7-208ENST00000450000 CFAP43Q8NDM7 1665 aa36.13■■■■□ 3.37
CPSF7-208ENST00000450000 EFCAB5A4FU69 1503 aa36.11■■■■□ 3.37
CPSF7-208ENST00000450000 COL17A1Q9UMD9 1497 aaPredicted RBP36.11■■■■□ 3.37
CPSF7-208ENST00000450000 KDM4FA0A1W2PPD8 638 aa36.05■■■■□ 3.36
CPSF7-208ENST00000450000 PLEKHD1A6NEE1 506 aa36.05■■■■□ 3.36
CPSF7-208ENST00000450000 NUP153P49790 1475 aaKnown RBP36.03■■■■□ 3.36
CPSF7-208ENST00000450000 ATP1B4Q9UN42 357 aaPredicted RBP35.99■■■■□ 3.35
CPSF7-208ENST00000450000 PHLDB1Q86UU1 1377 aa35.91■■■■□ 3.34
CPSF7-208ENST00000450000 ABCA9Q8IUA7 1624 aa35.9■■■■□ 3.34
CPSF7-208ENST00000450000 FMN1Q68DA7 1419 aa35.87■■■■□ 3.33
CPSF7-208ENST00000450000 ADGRL1O94910 1474 aa35.85■■■■□ 3.33
CPSF7-208ENST00000450000 ARAP3Q8WWN8 1544 aa35.82■■■■□ 3.32
CPSF7-208ENST00000450000 ARHGAP35Q9NRY4 1499 aa35.8■■■■□ 3.32
CPSF7-208ENST00000450000 CDK11AQ9UQ88 783 aaPredicted RBP35.79■■■■□ 3.32
CPSF7-208ENST00000450000 NEO1Q92859 1461 aa35.79■■■■□ 3.32
CPSF7-208ENST00000450000 RAPGEF3O95398 923 aa35.74■■■■□ 3.31
CPSF7-208ENST00000450000 CDK13Q14004 1512 aaKnown RBP35.73■■■■□ 3.31
CPSF7-208ENST00000450000 HECW1Q76N89 1606 aa35.7■■■■□ 3.31
CPSF7-208ENST00000450000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.64■■■■□ 3.3
CPSF7-208ENST00000450000 FANCAO15360 1455 aa35.62■■■■□ 3.29
CPSF7-208ENST00000450000 AKNAQ7Z591 1439 aa35.61■■■■□ 3.29
CPSF7-208ENST00000450000 DENND4BO75064 1496 aaPredicted RBP35.59■■■■□ 3.29
CPSF7-208ENST00000450000 CFAP74Q9C0B2 1584 aa35.57■■■■□ 3.28
CPSF7-208ENST00000450000 ARID4BQ4LE39 1312 aaPredicted RBP35.57■■■■□ 3.28
CPSF7-208ENST00000450000 TTC37Q6PGP7 1564 aa35.55■■■■□ 3.28
CPSF7-208ENST00000450000 CLIP1P30622 1438 aa35.54■■■■□ 3.28
CPSF7-208ENST00000450000 EFCAB2Q5VUJ9 269 aa35.5■■■■□ 3.27
CPSF7-208ENST00000450000 PLCH2O75038 1416 aa35.49■■■■□ 3.27
CPSF7-208ENST00000450000 TROQ12816 1431 aaPredicted RBP35.48■■■■□ 3.27
CPSF7-208ENST00000450000 CASKIN1Q8WXD9 1431 aa35.45■■■■□ 3.27
CPSF7-208ENST00000450000 KIF14Q15058 1648 aa35.43■■■■□ 3.26
CPSF7-208ENST00000450000 FRMPD1Q5SYB0 1578 aa35.42■■■■□ 3.26
CPSF7-208ENST00000450000 CCDC18Q5T9S5 1454 aa35.41■■■■□ 3.26
CPSF7-208ENST00000450000 SCAPERQ9BY12 1400 aa35.41■■■■□ 3.26
CPSF7-208ENST00000450000 PCF11O94913 1555 aaKnown RBP35.36■■■■□ 3.25
CPSF7-208ENST00000450000 RICTORQ6R327 1708 aa35.33■■■■□ 3.25
CPSF7-208ENST00000450000 MYO5CQ9NQX4 1742 aa35.33■■■■□ 3.25
CPSF7-208ENST00000450000 MYT1LQ9UL68 1186 aa35.33■■■■□ 3.25
CPSF7-208ENST00000450000 ARHGAP5Q13017 1502 aa35.32■■■■□ 3.25
CPSF7-208ENST00000450000 FYCO1Q9BQS8 1478 aa35.31■■■■□ 3.24
CPSF7-208ENST00000450000 ARHGEF40Q8TER5 1519 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms