RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 HIRIP3Q9BW71 556 aaPredicted RBP19.2■□□□□ 0.66
UBE2F-SCLY-202ENST00000449891 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
UBE2F-SCLY-202ENST00000449891 CUX1P39880 1505 aa19.15■□□□□ 0.66
UBE2F-SCLY-202ENST00000449891 BCANQ96GW7 911 aa19.14■□□□□ 0.66
UBE2F-SCLY-202ENST00000449891 POLA1P09884 1462 aaPredicted RBP19.14■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 ZNF608Q9ULD9 1512 aaPredicted RBP19.09■□□□□ 0.65
UBE2F-SCLY-202ENST00000449891 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 DDX10Q13206 875 aaKnown RBP19.07■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 RAB3GAP2Q9H2M9 1393 aa19.02■□□□□ 0.64
UBE2F-SCLY-202ENST00000449891 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.639e-7■■■■■ 27
UBE2F-SCLY-202ENST00000449891 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
UBE2F-SCLY-202ENST00000449891 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
UBE2F-SCLY-202ENST00000449891 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
UBE2F-SCLY-202ENST00000449891 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
UBE2F-SCLY-202ENST00000449891 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
UBE2F-SCLY-202ENST00000449891 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 IGF1RP08069 1367 aa18.9■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
UBE2F-SCLY-202ENST00000449891 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 FKBP8Q14318 412 aa18.89■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 FBLN2P98095 1184 aa18.88■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 ERICH6Q7L0X2 663 aa18.85■□□□□ 0.61
UBE2F-SCLY-202ENST00000449891 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
UBE2F-SCLY-202ENST00000449891 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 SYNJ2O15056 1496 aa18.72■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 CHD1O14646 1710 aa18.71■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
UBE2F-SCLY-202ENST00000449891 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
UBE2F-SCLY-202ENST00000449891 ANP32CO43423 234 aa18.69■□□□□ 0.58
UBE2F-SCLY-202ENST00000449891 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
UBE2F-SCLY-202ENST00000449891 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
UBE2F-SCLY-202ENST00000449891 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
UBE2F-SCLY-202ENST00000449891 NEFLP07196 543 aa18.64■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 TONSLQ96HA7 1378 aa18.63■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
UBE2F-SCLY-202ENST00000449891 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 FOXD1Q16676 465 aa18.56■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 RBM19Q9Y4C8 960 aaKnown RBP18.52■□□□□ 0.56
UBE2F-SCLY-202ENST00000449891 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 NUP160Q12769 1436 aa18.5■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 CUL7Q14999 1698 aa18.49■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 CCER2I3L3R5 266 aa18.46■□□□□ 0.55
UBE2F-SCLY-202ENST00000449891 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 JPH4Q96JJ6 628 aa18.39■□□□□ 0.54
UBE2F-SCLY-202ENST00000449891 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 NAIPQ13075 1403 aa18.36■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
UBE2F-SCLY-202ENST00000449891 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms