RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 PRG4Q92954 1404 aaPredicted RBP39.01■■■■□ 3.84
NME4-206ENST00000448828 JPH4Q96JJ6 628 aa38.96■■■■□ 3.83
NME4-206ENST00000448828 CARMIL1Q5VZK9 1371 aa38.92■■■■□ 3.82
NME4-206ENST00000448828 KIAA0586Q9BVV6 1533 aa38.86■■■■□ 3.81
NME4-206ENST00000448828 RAPGEF2Q9Y4G8 1499 aa38.64■■■■□ 3.78
NME4-206ENST00000448828 IQGAP2Q13576 1575 aa38.63■■■■□ 3.77
NME4-206ENST00000448828 TTBK1Q5TCY1 1321 aaPredicted RBP38.54■■■■□ 3.76
NME4-206ENST00000448828 CARMIL2Q6F5E8 1435 aa38.53■■■■□ 3.76
NME4-206ENST00000448828 ADCY10Q96PN6 1610 aa38.49■■■■□ 3.75
NME4-206ENST00000448828 NPM1P06748 294 aaKnown RBP eCLIP38.49■■■■□ 3.75
NME4-206ENST00000448828 PTPRGP23470 1445 aa38.45■■■■□ 3.75
NME4-206ENST00000448828 TNIKQ9UKE5 1360 aa38.42■■■■□ 3.74
NME4-206ENST00000448828 CTTNBP2Q8WZ74 1663 aa38.36■■■■□ 3.73
NME4-206ENST00000448828 DISP1Q96F81 1524 aa38.34■■■■□ 3.73
NME4-206ENST00000448828 KIF13AQ9H1H9 1805 aa38.34■■■■□ 3.73
NME4-206ENST00000448828 UGGT2Q9NYU1 1516 aa38.33■■■■□ 3.73
NME4-206ENST00000448828 MAPKBP1O60336 1514 aa38.33■■■■□ 3.73
NME4-206ENST00000448828 PRXQ9BXM0 1461 aa38.29■■■■□ 3.72
NME4-206ENST00000448828 KIAA0556O60303 1618 aa38.27■■■■□ 3.72
NME4-206ENST00000448828 ABCC10Q5T3U5 1492 aa38.23■■■■□ 3.71
NME4-206ENST00000448828 FAM69CQ0P6D2 419 aa38.22■■■■□ 3.71
NME4-206ENST00000448828 DIP2BQ9P265 1576 aa38.19■■■■□ 3.7
NME4-206ENST00000448828 ABCC2Q92887 1545 aa38.17■■■■□ 3.7
NME4-206ENST00000448828 UACAQ9BZF9 1416 aa38.16■■■■□ 3.7
NME4-206ENST00000448828 CSRNP3Q8WYN3 585 aa38.14■■■■□ 3.7
NME4-206ENST00000448828 UHRF1BP1LA0JNW5 1464 aa38.11■■■■□ 3.69
NME4-206ENST00000448828 GOLGA3Q08378 1498 aa38.11■■■■□ 3.69
NME4-206ENST00000448828 EEA1Q15075 1411 aa38.08■■■■□ 3.69
NME4-206ENST00000448828 FAM9AQ8IZU1 332 aaPredicted RBP38.04■■■■□ 3.68
NME4-206ENST00000448828 ASXL2Q76L83 1435 aa38.02■■■■□ 3.68
NME4-206ENST00000448828 PLB1Q6P1J6 1458 aa37.97■■■■□ 3.67
NME4-206ENST00000448828 TSPOAP1O95153 1857 aa37.97■■■■□ 3.67
NME4-206ENST00000448828 ZCCHC11Q5TAX3 1644 aaKnown RBP37.96■■■■□ 3.67
NME4-206ENST00000448828 KDM5BQ9UGL1 1544 aa37.95■■■■□ 3.67
NME4-206ENST00000448828 P3H3Q8IVL6 736 aa37.87■■■■□ 3.65
NME4-206ENST00000448828 CHIC1Q5VXU3 224 aa37.84■■■■□ 3.65
NME4-206ENST00000448828 ABCA8O94911 1581 aa37.84■■■■□ 3.65
NME4-206ENST00000448828 RANGAP1P46060 587 aaPredicted RBP37.81■■■■□ 3.64
NME4-206ENST00000448828 GLI2P10070 1586 aa37.8■■■■□ 3.64
NME4-206ENST00000448828 KDM6BO15054 1643 aa37.79■■■■□ 3.64
NME4-206ENST00000448828 KIF21BO75037 1637 aa37.78■■■■□ 3.64
NME4-206ENST00000448828 SAMD9Q5K651 1589 aa37.77■■■■□ 3.64
NME4-206ENST00000448828 EPRSP07814 1512 aaKnown RBP37.77■■■■□ 3.64
NME4-206ENST00000448828 WDR7Q9Y4E6 1490 aa37.73■■■■□ 3.63
NME4-206ENST00000448828 EHMT2Q96KQ7 1210 aa37.7■■■■□ 3.63
NME4-206ENST00000448828 ARID3CA6NKF2 412 aa37.68■■■■□ 3.62
NME4-206ENST00000448828 PPRC1Q5VV67 1664 aaKnown RBP37.67■■■■□ 3.62
NME4-206ENST00000448828 MAP3K4Q9Y6R4 1608 aa37.65■■■■□ 3.62
NME4-206ENST00000448828 AEBP2Q6ZN18 517 aaPredicted RBP37.64■■■■□ 3.62
NME4-206ENST00000448828 FHOD3Q2V2M9 1422 aa37.6■■■■□ 3.61
NME4-206ENST00000448828 RAPGEF6Q8TEU7 1601 aa37.58■■■■□ 3.61
NME4-206ENST00000448828 KCNH8Q96L42 1107 aa37.58■■■■□ 3.61
NME4-206ENST00000448828 TEX14Q8IWB6 1497 aa37.56■■■■□ 3.6
NME4-206ENST00000448828 UBTFP17480 764 aaKnown RBP37.54■■■■□ 3.6
NME4-206ENST00000448828 EFCAB5A4FU69 1503 aa37.51■■■■□ 3.6
NME4-206ENST00000448828 ATP10BO94823 1461 aa37.51■■■■□ 3.59
NME4-206ENST00000448828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.48■■■■□ 3.59
NME4-206ENST00000448828 HNRNPUL2Q1KMD3 747 aaKnown RBP37.48■■■■□ 3.59
NME4-206ENST00000448828 CFAP43Q8NDM7 1665 aa37.47■■■■□ 3.59
NME4-206ENST00000448828 CD109Q6YHK3 1445 aa37.44■■■■□ 3.58
NME4-206ENST00000448828 NUP153P49790 1475 aaKnown RBP37.39■■■■□ 3.58
NME4-206ENST00000448828 MAGI3Q5TCQ9 1506 aa37.35■■■■□ 3.57
NME4-206ENST00000448828 COL17A1Q9UMD9 1497 aaPredicted RBP37.34■■■■□ 3.57
NME4-206ENST00000448828 ABCA9Q8IUA7 1624 aa37.25■■■■□ 3.55
NME4-206ENST00000448828 ARHGAP35Q9NRY4 1499 aa37.22■■■■□ 3.55
NME4-206ENST00000448828 ATP1B4Q9UN42 357 aaPredicted RBP37.18■■■■□ 3.54
NME4-206ENST00000448828 PLEKHD1A6NEE1 506 aa37.17■■■■□ 3.54
NME4-206ENST00000448828 FMN1Q68DA7 1419 aa37.17■■■■□ 3.54
NME4-206ENST00000448828 CDK13Q14004 1512 aaKnown RBP37.15■■■■□ 3.54
NME4-206ENST00000448828 HECW1Q76N89 1606 aa37.13■■■■□ 3.53
NME4-206ENST00000448828 KDM4FA0A1W2PPD8 638 aa37.09■■■■□ 3.53
NME4-206ENST00000448828 ARAP3Q8WWN8 1544 aa37.03■■■■□ 3.52
NME4-206ENST00000448828 ADGRL1O94910 1474 aa37.01■■■■□ 3.52
NME4-206ENST00000448828 NEO1Q92859 1461 aa37■■■■□ 3.51
NME4-206ENST00000448828 PHLDB1Q86UU1 1377 aa36.99■■■■□ 3.51
NME4-206ENST00000448828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.99■■■■□ 3.511e-6■■■□□ 18.6
NME4-206ENST00000448828 TTC37Q6PGP7 1564 aa36.97■■■■□ 3.51
NME4-206ENST00000448828 CFAP74Q9C0B2 1584 aa36.9■■■■□ 3.5
NME4-206ENST00000448828 RAPGEF3O95398 923 aa36.89■■■■□ 3.5
NME4-206ENST00000448828 CDK11AQ9UQ88 783 aaPredicted RBP36.89■■■■□ 3.5
NME4-206ENST00000448828 PCF11O94913 1555 aaKnown RBP36.88■■■■□ 3.49
NME4-206ENST00000448828 FANCAO15360 1455 aa36.88■■■■□ 3.49
NME4-206ENST00000448828 LRRIQ1Q96JM4 1722 aa36.85■■■■□ 3.49
NME4-206ENST00000448828 CLIP1P30622 1438 aa36.85■■■■□ 3.49
NME4-206ENST00000448828 FRMPD1Q5SYB0 1578 aa36.82■■■■□ 3.48
NME4-206ENST00000448828 AKNAQ7Z591 1439 aa36.81■■■■□ 3.48
NME4-206ENST00000448828 KIF14Q15058 1648 aa36.81■■■■□ 3.48
NME4-206ENST00000448828 CASKIN1Q8WXD9 1431 aa36.79■■■■□ 3.48
NME4-206ENST00000448828 DENND4BO75064 1496 aaPredicted RBP36.77■■■■□ 3.48
NME4-206ENST00000448828 TROQ12816 1431 aaPredicted RBP36.76■■■■□ 3.48
NME4-206ENST00000448828 CCDC18Q5T9S5 1454 aa36.75■■■■□ 3.47
NME4-206ENST00000448828 MYO5CQ9NQX4 1742 aa36.75■■■■□ 3.47
NME4-206ENST00000448828 PLCH2O75038 1416 aa36.72■■■■□ 3.47
NME4-206ENST00000448828 RICTORQ6R327 1708 aa36.71■■■■□ 3.47
NME4-206ENST00000448828 FYCO1Q9BQS8 1478 aa36.71■■■■□ 3.47
NME4-206ENST00000448828 ARHGEF40Q8TER5 1519 aa36.64■■■■□ 3.46
NME4-206ENST00000448828 ARHGAP5Q13017 1502 aa36.63■■■■□ 3.45
NME4-206ENST00000448828 EFCAB2Q5VUJ9 269 aa36.61■■■■□ 3.45
NME4-206ENST00000448828 ARID4BQ4LE39 1312 aaPredicted RBP36.6■■■■□ 3.45
NME4-206ENST00000448828 SCAPERQ9BY12 1400 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms