RNA–Protein interactions for RNA: ENST00000448623.5

GTF2B-203, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-203ENST00000448623 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
GTF2B-203ENST00000448623 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
GTF2B-203ENST00000448623 CUX2O14529 1486 aa12.24□□□□□ -0.45
GTF2B-203ENST00000448623 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
GTF2B-203ENST00000448623 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
GTF2B-203ENST00000448623 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
GTF2B-203ENST00000448623 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
GTF2B-203ENST00000448623 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
GTF2B-203ENST00000448623 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
GTF2B-203ENST00000448623 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
GTF2B-203ENST00000448623 CLCN6P51797 869 aa12.11□□□□□ -0.47
GTF2B-203ENST00000448623 GABBR2O75899 941 aa12.1□□□□□ -0.47
GTF2B-203ENST00000448623 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
GTF2B-203ENST00000448623 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
GTF2B-203ENST00000448623 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
GTF2B-203ENST00000448623 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
GTF2B-203ENST00000448623 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
GTF2B-203ENST00000448623 NUBP1P53384 320 aa12.02□□□□□ -0.49
GTF2B-203ENST00000448623 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
GTF2B-203ENST00000448623 PHF12Q96QT6 1004 aa12□□□□□ -0.49
GTF2B-203ENST00000448623 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
GTF2B-203ENST00000448623 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
GTF2B-203ENST00000448623 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
GTF2B-203ENST00000448623 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-203ENST00000448623 NESP48681 1621 aa11.92□□□□□ -0.5
GTF2B-203ENST00000448623 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
GTF2B-203ENST00000448623 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
GTF2B-203ENST00000448623 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
GTF2B-203ENST00000448623 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
GTF2B-203ENST00000448623 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
GTF2B-203ENST00000448623 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
GTF2B-203ENST00000448623 GSE1Q14687 1217 aa11.85□□□□□ -0.51
GTF2B-203ENST00000448623 MAP3K13O43283 966 aa11.84□□□□□ -0.51
GTF2B-203ENST00000448623 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
GTF2B-203ENST00000448623 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
GTF2B-203ENST00000448623 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
GTF2B-203ENST00000448623 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
GTF2B-203ENST00000448623 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.52
GTF2B-203ENST00000448623 PYGBP11216 843 aa11.76□□□□□ -0.53
GTF2B-203ENST00000448623 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
GTF2B-203ENST00000448623 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
GTF2B-203ENST00000448623 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
GTF2B-203ENST00000448623 SMARCA2P51531 1590 aa11.71□□□□□ -0.54
GTF2B-203ENST00000448623 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
GTF2B-203ENST00000448623 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
GTF2B-203ENST00000448623 TIE1P35590 1138 aa11.7□□□□□ -0.54
GTF2B-203ENST00000448623 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
GTF2B-203ENST00000448623 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
GTF2B-203ENST00000448623 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
GTF2B-203ENST00000448623 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
GTF2B-203ENST00000448623 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
GTF2B-203ENST00000448623 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
GTF2B-203ENST00000448623 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
GTF2B-203ENST00000448623 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
GTF2B-203ENST00000448623 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
GTF2B-203ENST00000448623 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
GTF2B-203ENST00000448623 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
GTF2B-203ENST00000448623 LHX8Q68G74 356 aa11.59□□□□□ -0.55
GTF2B-203ENST00000448623 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
GTF2B-203ENST00000448623 C7P10643 843 aa11.58□□□□□ -0.56
GTF2B-203ENST00000448623 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
GTF2B-203ENST00000448623 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
GTF2B-203ENST00000448623 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
GTF2B-203ENST00000448623 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
GTF2B-203ENST00000448623 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
GTF2B-203ENST00000448623 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
GTF2B-203ENST00000448623 SMARCA4P51532 1647 aa11.55□□□□□ -0.56
GTF2B-203ENST00000448623 WDR62O43379 1518 aa11.54□□□□□ -0.56
GTF2B-203ENST00000448623 IER5LQ5T953 404 aa11.51□□□□□ -0.57
GTF2B-203ENST00000448623 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
GTF2B-203ENST00000448623 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
GTF2B-203ENST00000448623 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
GTF2B-203ENST00000448623 PSEN1P49768 467 aa11.5□□□□□ -0.57
GTF2B-203ENST00000448623 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
GTF2B-203ENST00000448623 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
GTF2B-203ENST00000448623 SEC24BO95487 1268 aa11.45□□□□□ -0.58
GTF2B-203ENST00000448623 CYB5RLQ6IPT4 315 aa11.45□□□□□ -0.58
GTF2B-203ENST00000448623 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
GTF2B-203ENST00000448623 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
GTF2B-203ENST00000448623 PKD2Q13563 968 aa11.44□□□□□ -0.58
GTF2B-203ENST00000448623 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
GTF2B-203ENST00000448623 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
GTF2B-203ENST00000448623 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
GTF2B-203ENST00000448623 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
GTF2B-203ENST00000448623 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
GTF2B-203ENST00000448623 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
GTF2B-203ENST00000448623 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
GTF2B-203ENST00000448623 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
GTF2B-203ENST00000448623 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
GTF2B-203ENST00000448623 PLCG2P16885 1265 aa11.38□□□□□ -0.59
GTF2B-203ENST00000448623 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
GTF2B-203ENST00000448623 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
GTF2B-203ENST00000448623 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
GTF2B-203ENST00000448623 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
GTF2B-203ENST00000448623 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
GTF2B-203ENST00000448623 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
GTF2B-203ENST00000448623 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
GTF2B-203ENST00000448623 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
GTF2B-203ENST00000448623 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
GTF2B-203ENST00000448623 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms