RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
CHRD-205ENST00000448472 ARHGAP35Q9NRY4 1499 aa22.17■■□□□ 1.14
CHRD-205ENST00000448472 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
CHRD-205ENST00000448472 TONSLQ96HA7 1378 aa22.16■■□□□ 1.14
CHRD-205ENST00000448472 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
CHRD-205ENST00000448472 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.14
CHRD-205ENST00000448472 CUX2O14529 1486 aa22.12■■□□□ 1.13
CHRD-205ENST00000448472 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
CHRD-205ENST00000448472 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
CHRD-205ENST00000448472 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
CHRD-205ENST00000448472 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
CHRD-205ENST00000448472 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
CHRD-205ENST00000448472 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
CHRD-205ENST00000448472 CUX1P39880 1505 aa22.06■■□□□ 1.12
CHRD-205ENST00000448472 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
CHRD-205ENST00000448472 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
CHRD-205ENST00000448472 IGF1RP08069 1367 aa22.01■■□□□ 1.11
CHRD-205ENST00000448472 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
CHRD-205ENST00000448472 FAM9BQ8IZU0 186 aa21.97■■□□□ 1.11
CHRD-205ENST00000448472 POLR3GLQ9BT43 218 aa21.96■■□□□ 1.11
CHRD-205ENST00000448472 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.11
CHRD-205ENST00000448472 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CHRD-205ENST00000448472 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
CHRD-205ENST00000448472 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
CHRD-205ENST00000448472 FHOD3Q2V2M9 1422 aa21.93■■□□□ 1.1
CHRD-205ENST00000448472 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CHRD-205ENST00000448472 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
CHRD-205ENST00000448472 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
CHRD-205ENST00000448472 TIAM1Q13009 1591 aa21.9■■□□□ 1.1
CHRD-205ENST00000448472 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
CHRD-205ENST00000448472 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
CHRD-205ENST00000448472 MSH5O43196 834 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 CFTRP13569 1480 aa21.79■■□□□ 1.08
CHRD-205ENST00000448472 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
CHRD-205ENST00000448472 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
CHRD-205ENST00000448472 FOXD1Q16676 465 aa21.77■■□□□ 1.08
CHRD-205ENST00000448472 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CHRD-205ENST00000448472 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
CHRD-205ENST00000448472 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
CHRD-205ENST00000448472 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
CHRD-205ENST00000448472 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
CHRD-205ENST00000448472 NBR1Q14596 966 aa21.7■■□□□ 1.06
CHRD-205ENST00000448472 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
CHRD-205ENST00000448472 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
CHRD-205ENST00000448472 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
CHRD-205ENST00000448472 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
CHRD-205ENST00000448472 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
CHRD-205ENST00000448472 MAP3K1Q13233 1512 aa21.64■■□□□ 1.06
CHRD-205ENST00000448472 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
CHRD-205ENST00000448472 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
CHRD-205ENST00000448472 FMN1Q68DA7 1419 aa21.58■■□□□ 1.04
CHRD-205ENST00000448472 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
CHRD-205ENST00000448472 PRKRIP1Q9H875 184 aaPredicted RBP21.57■■□□□ 1.04
CHRD-205ENST00000448472 MPHOSPH9Q99550 1183 aa21.56■■□□□ 1.04
CHRD-205ENST00000448472 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
CHRD-205ENST00000448472 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
CHRD-205ENST00000448472 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
CHRD-205ENST00000448472 FYCO1Q9BQS8 1478 aa21.54■■□□□ 1.04
CHRD-205ENST00000448472 HFM1A2PYH4 1435 aa21.53■■□□□ 1.04
CHRD-205ENST00000448472 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
CHRD-205ENST00000448472 NAIPQ13075 1403 aa21.52■■□□□ 1.04
CHRD-205ENST00000448472 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.045e-7■■■■□ 20.7
CHRD-205ENST00000448472 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
CHRD-205ENST00000448472 DEKP35659 375 aaKnown RBP21.5■■□□□ 1.03
CHRD-205ENST00000448472 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
CHRD-205ENST00000448472 NPM2Q86SE8 214 aaKnown RBP21.49■■□□□ 1.03
CHRD-205ENST00000448472 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
CHRD-205ENST00000448472 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
CHRD-205ENST00000448472 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
CHRD-205ENST00000448472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHRD-205ENST00000448472 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 ERICH6BQ5W0A0 696 aa21.46■■□□□ 1.03
CHRD-205ENST00000448472 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
CHRD-205ENST00000448472 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
CHRD-205ENST00000448472 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 TMC1Q8TDI8 760 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
CHRD-205ENST00000448472 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
CHRD-205ENST00000448472 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
CHRD-205ENST00000448472 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
CHRD-205ENST00000448472 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
CHRD-205ENST00000448472 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
CHRD-205ENST00000448472 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
CHRD-205ENST00000448472 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
CHRD-205ENST00000448472 NESP48681 1621 aa21.33■■□□□ 1.01
CHRD-205ENST00000448472 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
CHRD-205ENST00000448472 ZNF644Q9H582 1327 aaPredicted RBP21.31■■□□□ 1
CHRD-205ENST00000448472 NUDCQ9Y266 331 aa21.3■■□□□ 1
CHRD-205ENST00000448472 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CHRD-205ENST00000448472 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms