RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 ANP32CO43423 234 aa17.85■□□□□ 0.45
UBP1-204ENST00000447368 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
UBP1-204ENST00000447368 CUX1P39880 1505 aa17.82■□□□□ 0.44
UBP1-204ENST00000447368 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
UBP1-204ENST00000447368 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
UBP1-204ENST00000447368 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
UBP1-204ENST00000447368 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
UBP1-204ENST00000447368 NBR1Q14596 966 aa17.8■□□□□ 0.44
UBP1-204ENST00000447368 SETD5Q9C0A6 1442 aa17.79■□□□□ 0.44
UBP1-204ENST00000447368 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
UBP1-204ENST00000447368 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
UBP1-204ENST00000447368 IGF1RP08069 1367 aa17.75■□□□□ 0.43
UBP1-204ENST00000447368 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
UBP1-204ENST00000447368 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
UBP1-204ENST00000447368 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
UBP1-204ENST00000447368 RTN4Q9NQC3 1192 aaKnown RBP17.74■□□□□ 0.43
UBP1-204ENST00000447368 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
UBP1-204ENST00000447368 DEKP35659 375 aaKnown RBP17.72■□□□□ 0.43
UBP1-204ENST00000447368 CHIC2Q9UKJ5 165 aa17.7■□□□□ 0.42
UBP1-204ENST00000447368 MSH5O43196 834 aa17.69■□□□□ 0.42
UBP1-204ENST00000447368 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
UBP1-204ENST00000447368 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
UBP1-204ENST00000447368 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
UBP1-204ENST00000447368 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
UBP1-204ENST00000447368 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
UBP1-204ENST00000447368 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
UBP1-204ENST00000447368 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
UBP1-204ENST00000447368 CFTRP13569 1480 aa17.64■□□□□ 0.41
UBP1-204ENST00000447368 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
UBP1-204ENST00000447368 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
UBP1-204ENST00000447368 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
UBP1-204ENST00000447368 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
UBP1-204ENST00000447368 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
UBP1-204ENST00000447368 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
UBP1-204ENST00000447368 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
UBP1-204ENST00000447368 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
UBP1-204ENST00000447368 TIAM1Q13009 1591 aa17.58■□□□□ 0.4
UBP1-204ENST00000447368 MAPKBP1O60336 1514 aa17.58■□□□□ 0.4
UBP1-204ENST00000447368 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
UBP1-204ENST00000447368 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
UBP1-204ENST00000447368 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
UBP1-204ENST00000447368 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
UBP1-204ENST00000447368 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
UBP1-204ENST00000447368 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
UBP1-204ENST00000447368 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
UBP1-204ENST00000447368 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
UBP1-204ENST00000447368 FOXD1Q16676 465 aa17.48■□□□□ 0.39
UBP1-204ENST00000447368 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
UBP1-204ENST00000447368 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
UBP1-204ENST00000447368 SENP3-EIF4A1A0A087X0R7 540 aa17.46■□□□□ 0.39
UBP1-204ENST00000447368 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
UBP1-204ENST00000447368 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
UBP1-204ENST00000447368 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
UBP1-204ENST00000447368 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
UBP1-204ENST00000447368 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBP1-204ENST00000447368 FGD6Q6ZV73 1430 aa17.41■□□□□ 0.38
UBP1-204ENST00000447368 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
UBP1-204ENST00000447368 FMN1Q68DA7 1419 aa17.39■□□□□ 0.37
UBP1-204ENST00000447368 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
UBP1-204ENST00000447368 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
UBP1-204ENST00000447368 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
UBP1-204ENST00000447368 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
UBP1-204ENST00000447368 NESP48681 1621 aa17.34■□□□□ 0.37
UBP1-204ENST00000447368 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
UBP1-204ENST00000447368 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
UBP1-204ENST00000447368 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.36
UBP1-204ENST00000447368 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.36
UBP1-204ENST00000447368 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
UBP1-204ENST00000447368 UACAQ9BZF9 1416 aa17.32■□□□□ 0.36
UBP1-204ENST00000447368 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
UBP1-204ENST00000447368 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
UBP1-204ENST00000447368 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
UBP1-204ENST00000447368 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
UBP1-204ENST00000447368 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
UBP1-204ENST00000447368 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
UBP1-204ENST00000447368 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
UBP1-204ENST00000447368 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
UBP1-204ENST00000447368 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
UBP1-204ENST00000447368 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
UBP1-204ENST00000447368 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
UBP1-204ENST00000447368 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
UBP1-204ENST00000447368 NAIPQ13075 1403 aa17.25■□□□□ 0.35
UBP1-204ENST00000447368 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
UBP1-204ENST00000447368 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.354e-12■■■□□ 18.4
UBP1-204ENST00000447368 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
UBP1-204ENST00000447368 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
UBP1-204ENST00000447368 FBLN2P98095 1184 aa17.22■□□□□ 0.35
UBP1-204ENST00000447368 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
UBP1-204ENST00000447368 PPP4R2Q9NY27 417 aa17.21■□□□□ 0.35
UBP1-204ENST00000447368 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
UBP1-204ENST00000447368 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
UBP1-204ENST00000447368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBP1-204ENST00000447368 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
UBP1-204ENST00000447368 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
UBP1-204ENST00000447368 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
UBP1-204ENST00000447368 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
UBP1-204ENST00000447368 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
UBP1-204ENST00000447368 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
UBP1-204ENST00000447368 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
UBP1-204ENST00000447368 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms