RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CUL7Q14999 1698 aa28.37■■■□□ 2.13
CTDSP1-204ENST00000443891 RUSC2Q8N2Y8 1516 aa28.37■■■□□ 2.13
CTDSP1-204ENST00000443891 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
CTDSP1-204ENST00000443891 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
CTDSP1-204ENST00000443891 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
CTDSP1-204ENST00000443891 MAPKBP1O60336 1514 aa28.09■■■□□ 2.09
CTDSP1-204ENST00000443891 CARMIL2Q6F5E8 1435 aa28.08■■■□□ 2.09
CTDSP1-204ENST00000443891 ABCC10Q5T3U5 1492 aa28.05■■■□□ 2.08
CTDSP1-204ENST00000443891 PTPRGP23470 1445 aa28.04■■■□□ 2.08
CTDSP1-204ENST00000443891 ADCY10Q96PN6 1610 aa28.03■■■□□ 2.08
CTDSP1-204ENST00000443891 TNIKQ9UKE5 1360 aa28.02■■■□□ 2.08
CTDSP1-204ENST00000443891 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
CTDSP1-204ENST00000443891 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
CTDSP1-204ENST00000443891 KIF13AQ9H1H9 1805 aa28■■■□□ 2.07
CTDSP1-204ENST00000443891 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
CTDSP1-204ENST00000443891 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
CTDSP1-204ENST00000443891 UGGT2Q9NYU1 1516 aa27.88■■■□□ 2.05
CTDSP1-204ENST00000443891 UHRF1BP1LA0JNW5 1464 aa27.88■■■□□ 2.05
CTDSP1-204ENST00000443891 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
CTDSP1-204ENST00000443891 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
CTDSP1-204ENST00000443891 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
CTDSP1-204ENST00000443891 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
CTDSP1-204ENST00000443891 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
CTDSP1-204ENST00000443891 TTBK1Q5TCY1 1321 aaPredicted RBP27.79■■■□□ 2.04
CTDSP1-204ENST00000443891 PRXQ9BXM0 1461 aa27.74■■■□□ 2.03
CTDSP1-204ENST00000443891 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
CTDSP1-204ENST00000443891 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
CTDSP1-204ENST00000443891 GOLGA3Q08378 1498 aa27.72■■■□□ 2.03
CTDSP1-204ENST00000443891 KDM5BQ9UGL1 1544 aa27.72■■■□□ 2.03
CTDSP1-204ENST00000443891 GLI2P10070 1586 aa27.7■■■□□ 2.03
CTDSP1-204ENST00000443891 CTTNBP2Q8WZ74 1663 aa27.68■■■□□ 2.02
CTDSP1-204ENST00000443891 KDM6BO15054 1643 aa27.65■■■□□ 2.02
CTDSP1-204ENST00000443891 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
CTDSP1-204ENST00000443891 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
CTDSP1-204ENST00000443891 TSPOAP1O95153 1857 aa27.57■■■□□ 2
CTDSP1-204ENST00000443891 CSRNP3Q8WYN3 585 aa27.56■■■□□ 2
CTDSP1-204ENST00000443891 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
CTDSP1-204ENST00000443891 EEA1Q15075 1411 aa27.55■■■□□ 2
CTDSP1-204ENST00000443891 ABCA8O94911 1581 aa27.51■■□□□ 1.99
CTDSP1-204ENST00000443891 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
CTDSP1-204ENST00000443891 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
CTDSP1-204ENST00000443891 PPRC1Q5VV67 1664 aaKnown RBP27.48■■□□□ 1.99
CTDSP1-204ENST00000443891 MAP3K4Q9Y6R4 1608 aa27.48■■□□□ 1.99
CTDSP1-204ENST00000443891 MAGI3Q5TCQ9 1506 aa27.35■■□□□ 1.97
CTDSP1-204ENST00000443891 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
CTDSP1-204ENST00000443891 CD109Q6YHK3 1445 aa27.33■■□□□ 1.97
CTDSP1-204ENST00000443891 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
CTDSP1-204ENST00000443891 KDM4FA0A1W2PPD8 638 aa27.32■■□□□ 1.96
CTDSP1-204ENST00000443891 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
CTDSP1-204ENST00000443891 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
CTDSP1-204ENST00000443891 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
CTDSP1-204ENST00000443891 ATP10BO94823 1461 aa27.28■■□□□ 1.96
CTDSP1-204ENST00000443891 KIF21BO75037 1637 aa27.2■■□□□ 1.95
CTDSP1-204ENST00000443891 RAPGEF6Q8TEU7 1601 aa27.2■■□□□ 1.95
CTDSP1-204ENST00000443891 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.94
CTDSP1-204ENST00000443891 EFCAB5A4FU69 1503 aa27.15■■□□□ 1.94
CTDSP1-204ENST00000443891 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
CTDSP1-204ENST00000443891 ARID3CA6NKF2 412 aa27.13■■□□□ 1.93
CTDSP1-204ENST00000443891 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
CTDSP1-204ENST00000443891 ABCA9Q8IUA7 1624 aa27.12■■□□□ 1.93
CTDSP1-204ENST00000443891 NUP153P49790 1475 aaKnown RBP27.12■■□□□ 1.93
CTDSP1-204ENST00000443891 FHOD3Q2V2M9 1422 aa27.11■■□□□ 1.93
CTDSP1-204ENST00000443891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.1■■□□□ 1.93
CTDSP1-204ENST00000443891 HNRNPUL2Q1KMD3 747 aaKnown RBP27.1■■□□□ 1.93
CTDSP1-204ENST00000443891 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
CTDSP1-204ENST00000443891 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
CTDSP1-204ENST00000443891 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
CTDSP1-204ENST00000443891 NEO1Q92859 1461 aa27.05■■□□□ 1.92
CTDSP1-204ENST00000443891 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
CTDSP1-204ENST00000443891 FMN1Q68DA7 1419 aa26.94■■□□□ 1.9
CTDSP1-204ENST00000443891 RAPGEF3O95398 923 aa26.87■■□□□ 1.89
CTDSP1-204ENST00000443891 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
CTDSP1-204ENST00000443891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.85■■□□□ 1.892e-6■■■■■ 43
CTDSP1-204ENST00000443891 CFAP74Q9C0B2 1584 aa26.84■■□□□ 1.89
CTDSP1-204ENST00000443891 CDK11AQ9UQ88 783 aaPredicted RBP26.84■■□□□ 1.89
CTDSP1-204ENST00000443891 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
CTDSP1-204ENST00000443891 FANCAO15360 1455 aa26.82■■□□□ 1.88
CTDSP1-204ENST00000443891 DENND4BO75064 1496 aaPredicted RBP26.82■■□□□ 1.88
CTDSP1-204ENST00000443891 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
CTDSP1-204ENST00000443891 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
CTDSP1-204ENST00000443891 FRMPD1Q5SYB0 1578 aa26.78■■□□□ 1.88
CTDSP1-204ENST00000443891 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
CTDSP1-204ENST00000443891 PLCH2O75038 1416 aa26.75■■□□□ 1.87
CTDSP1-204ENST00000443891 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
CTDSP1-204ENST00000443891 ATP1B4Q9UN42 357 aaPredicted RBP26.73■■□□□ 1.87
CTDSP1-204ENST00000443891 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
CTDSP1-204ENST00000443891 HECW2Q9P2P5 1572 aa26.7■■□□□ 1.86
CTDSP1-204ENST00000443891 RICTORQ6R327 1708 aa26.7■■□□□ 1.86
CTDSP1-204ENST00000443891 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
CTDSP1-204ENST00000443891 ADAMTSL3P82987 1691 aa26.7■■□□□ 1.86
CTDSP1-204ENST00000443891 ZMYM4Q5VZL5 1548 aa26.69■■□□□ 1.86
CTDSP1-204ENST00000443891 EFCAB2Q5VUJ9 269 aa26.68■■□□□ 1.86
CTDSP1-204ENST00000443891 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
CTDSP1-204ENST00000443891 ARID4BQ4LE39 1312 aaPredicted RBP26.66■■□□□ 1.86
CTDSP1-204ENST00000443891 CLIP1P30622 1438 aa26.66■■□□□ 1.86
CTDSP1-204ENST00000443891 PTPRMP28827 1452 aa26.65■■□□□ 1.86
CTDSP1-204ENST00000443891 SCAPERQ9BY12 1400 aa26.64■■□□□ 1.85
CTDSP1-204ENST00000443891 BCORL1Q5H9F3 1711 aa26.63■■□□□ 1.85
CTDSP1-204ENST00000443891 POGZQ7Z3K3 1410 aa26.63■■□□□ 1.85
CTDSP1-204ENST00000443891 KIF14Q15058 1648 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms