RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
AC003001.1-201ENST00000443247 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
AC003001.1-201ENST00000443247 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
AC003001.1-201ENST00000443247 NUBP1P53384 320 aa13□□□□□ -0.33
AC003001.1-201ENST00000443247 RASEFQ8IZ41 740 aa13□□□□□ -0.33
AC003001.1-201ENST00000443247 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
AC003001.1-201ENST00000443247 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
AC003001.1-201ENST00000443247 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
AC003001.1-201ENST00000443247 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
AC003001.1-201ENST00000443247 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
AC003001.1-201ENST00000443247 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
AC003001.1-201ENST00000443247 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
AC003001.1-201ENST00000443247 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
AC003001.1-201ENST00000443247 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
AC003001.1-201ENST00000443247 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
AC003001.1-201ENST00000443247 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
AC003001.1-201ENST00000443247 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
AC003001.1-201ENST00000443247 GSE1Q14687 1217 aa12.8□□□□□ -0.36
AC003001.1-201ENST00000443247 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
AC003001.1-201ENST00000443247 TRPC6Q9Y210 931 aa12.79□□□□□ -0.36
AC003001.1-201ENST00000443247 MAP3K13O43283 966 aa12.78□□□□□ -0.36
AC003001.1-201ENST00000443247 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
AC003001.1-201ENST00000443247 SLC39A7Q92504 469 aa12.78□□□□□ -0.36
AC003001.1-201ENST00000443247 C7P10643 843 aa12.76□□□□□ -0.37
AC003001.1-201ENST00000443247 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
AC003001.1-201ENST00000443247 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
AC003001.1-201ENST00000443247 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
AC003001.1-201ENST00000443247 PYGBP11216 843 aa12.71□□□□□ -0.37
AC003001.1-201ENST00000443247 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
AC003001.1-201ENST00000443247 TIE1P35590 1138 aa12.69□□□□□ -0.38
AC003001.1-201ENST00000443247 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
AC003001.1-201ENST00000443247 CHRM1P11229 460 aaPredicted RBP12.65□□□□□ -0.38
AC003001.1-201ENST00000443247 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
AC003001.1-201ENST00000443247 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
AC003001.1-201ENST00000443247 PKD2Q13563 968 aa12.63□□□□□ -0.39
AC003001.1-201ENST00000443247 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
AC003001.1-201ENST00000443247 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
AC003001.1-201ENST00000443247 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
AC003001.1-201ENST00000443247 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
AC003001.1-201ENST00000443247 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
AC003001.1-201ENST00000443247 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
AC003001.1-201ENST00000443247 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
AC003001.1-201ENST00000443247 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
AC003001.1-201ENST00000443247 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
AC003001.1-201ENST00000443247 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
AC003001.1-201ENST00000443247 POTEMA6NI47 508 aa12.5□□□□□ -0.41
AC003001.1-201ENST00000443247 IER5LQ5T953 404 aa12.49□□□□□ -0.41
AC003001.1-201ENST00000443247 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
AC003001.1-201ENST00000443247 SEC24BO95487 1268 aa12.48□□□□□ -0.41
AC003001.1-201ENST00000443247 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
AC003001.1-201ENST00000443247 RGL2O15211 777 aa12.46□□□□□ -0.41
AC003001.1-201ENST00000443247 LCE2DQ5TA82 110 aaPredicted RBP12.46□□□□□ -0.41
AC003001.1-201ENST00000443247 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
AC003001.1-201ENST00000443247 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
AC003001.1-201ENST00000443247 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
AC003001.1-201ENST00000443247 PSEN1P49768 467 aa12.42□□□□□ -0.42
AC003001.1-201ENST00000443247 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
AC003001.1-201ENST00000443247 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
AC003001.1-201ENST00000443247 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
AC003001.1-201ENST00000443247 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
AC003001.1-201ENST00000443247 PLCG2P16885 1265 aa12.34□□□□□ -0.43
AC003001.1-201ENST00000443247 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
AC003001.1-201ENST00000443247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
AC003001.1-201ENST00000443247 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
AC003001.1-201ENST00000443247 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
AC003001.1-201ENST00000443247 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
AC003001.1-201ENST00000443247 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
AC003001.1-201ENST00000443247 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
AC003001.1-201ENST00000443247 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
AC003001.1-201ENST00000443247 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
AC003001.1-201ENST00000443247 STK25O00506 426 aa12.25□□□□□ -0.45
AC003001.1-201ENST00000443247 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
AC003001.1-201ENST00000443247 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
AC003001.1-201ENST00000443247 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
AC003001.1-201ENST00000443247 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
AC003001.1-201ENST00000443247 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
AC003001.1-201ENST00000443247 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
AC003001.1-201ENST00000443247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
AC003001.1-201ENST00000443247 ST18O60284 1047 aa12.16□□□□□ -0.46
AC003001.1-201ENST00000443247 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
AC003001.1-201ENST00000443247 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
AC003001.1-201ENST00000443247 SOX12O15370 315 aa12.11□□□□□ -0.47
AC003001.1-201ENST00000443247 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
AC003001.1-201ENST00000443247 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
AC003001.1-201ENST00000443247 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
AC003001.1-201ENST00000443247 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
AC003001.1-201ENST00000443247 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
AC003001.1-201ENST00000443247 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
AC003001.1-201ENST00000443247 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
AC003001.1-201ENST00000443247 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
AC003001.1-201ENST00000443247 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
AC003001.1-201ENST00000443247 SNPHO15079 494 aa12.01□□□□□ -0.49
AC003001.1-201ENST00000443247 NLRP6P59044 892 aa12.01□□□□□ -0.49
AC003001.1-201ENST00000443247 TMEM121BQ9BXQ6 578 aaPredicted RBP12□□□□□ -0.49
AC003001.1-201ENST00000443247 G3V3G9 751 aa11.99□□□□□ -0.49
AC003001.1-201ENST00000443247 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
AC003001.1-201ENST00000443247 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
AC003001.1-201ENST00000443247 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
AC003001.1-201ENST00000443247 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
AC003001.1-201ENST00000443247 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms