RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
USP6NL-203ENST00000443016 PRG4Q92954 1404 aaPredicted RBP14.96□□□□□ -0.01
USP6NL-203ENST00000443016 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
USP6NL-203ENST00000443016 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
USP6NL-203ENST00000443016 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
USP6NL-203ENST00000443016 CUL7Q14999 1698 aa14.93□□□□□ -0.02
USP6NL-203ENST00000443016 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
USP6NL-203ENST00000443016 KIAA0586Q9BVV6 1533 aa14.89□□□□□ -0.03
USP6NL-203ENST00000443016 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP6NL-203ENST00000443016 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
USP6NL-203ENST00000443016 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
USP6NL-203ENST00000443016 CARMIL2Q6F5E8 1435 aa14.79□□□□□ -0.04
USP6NL-203ENST00000443016 PTPRGP23470 1445 aa14.77□□□□□ -0.05
USP6NL-203ENST00000443016 IQGAP2Q13576 1575 aa14.77□□□□□ -0.05
USP6NL-203ENST00000443016 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
USP6NL-203ENST00000443016 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
USP6NL-203ENST00000443016 ADCY10Q96PN6 1610 aa14.71□□□□□ -0.05
USP6NL-203ENST00000443016 MAPKBP1O60336 1514 aa14.67□□□□□ -0.06
USP6NL-203ENST00000443016 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
USP6NL-203ENST00000443016 ABCC10Q5T3U5 1492 aa14.66□□□□□ -0.06
USP6NL-203ENST00000443016 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
USP6NL-203ENST00000443016 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
USP6NL-203ENST00000443016 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
USP6NL-203ENST00000443016 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
USP6NL-203ENST00000443016 ABCC2Q92887 1545 aa14.63□□□□□ -0.07
USP6NL-203ENST00000443016 KIF13AQ9H1H9 1805 aa14.63□□□□□ -0.07
USP6NL-203ENST00000443016 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
USP6NL-203ENST00000443016 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
USP6NL-203ENST00000443016 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
USP6NL-203ENST00000443016 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
USP6NL-203ENST00000443016 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
USP6NL-203ENST00000443016 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
USP6NL-203ENST00000443016 EEA1Q15075 1411 aa14.58□□□□□ -0.07
USP6NL-203ENST00000443016 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
USP6NL-203ENST00000443016 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
USP6NL-203ENST00000443016 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
USP6NL-203ENST00000443016 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
USP6NL-203ENST00000443016 KDM5BQ9UGL1 1544 aa14.53□□□□□ -0.08
USP6NL-203ENST00000443016 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.08
USP6NL-203ENST00000443016 TSPOAP1O95153 1857 aa14.51□□□□□ -0.09
USP6NL-203ENST00000443016 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
USP6NL-203ENST00000443016 ZCCHC11Q5TAX3 1644 aaKnown RBP14.49□□□□□ -0.09
USP6NL-203ENST00000443016 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
USP6NL-203ENST00000443016 KCNH8Q96L42 1107 aa14.47□□□□□ -0.09
USP6NL-203ENST00000443016 EPRSP07814 1512 aaKnown RBP14.47□□□□□ -0.09
USP6NL-203ENST00000443016 KDM6BO15054 1643 aa14.47□□□□□ -0.09
USP6NL-203ENST00000443016 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
USP6NL-203ENST00000443016 ABCA8O94911 1581 aa14.45□□□□□ -0.1
USP6NL-203ENST00000443016 GLI2P10070 1586 aa14.45□□□□□ -0.1
USP6NL-203ENST00000443016 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
USP6NL-203ENST00000443016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
USP6NL-203ENST00000443016 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
USP6NL-203ENST00000443016 SAMD9Q5K651 1589 aa14.41□□□□□ -0.1
USP6NL-203ENST00000443016 KIF21BO75037 1637 aa14.41□□□□□ -0.1
USP6NL-203ENST00000443016 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
USP6NL-203ENST00000443016 FHOD3Q2V2M9 1422 aa14.39□□□□□ -0.11
USP6NL-203ENST00000443016 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
USP6NL-203ENST00000443016 CD109Q6YHK3 1445 aa14.38□□□□□ -0.11
USP6NL-203ENST00000443016 ATP10BO94823 1461 aa14.37□□□□□ -0.11
USP6NL-203ENST00000443016 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
USP6NL-203ENST00000443016 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
USP6NL-203ENST00000443016 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.11
USP6NL-203ENST00000443016 COL17A1Q9UMD9 1497 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-203ENST00000443016 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-203ENST00000443016 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
USP6NL-203ENST00000443016 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
USP6NL-203ENST00000443016 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
USP6NL-203ENST00000443016 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
USP6NL-203ENST00000443016 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
USP6NL-203ENST00000443016 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
USP6NL-203ENST00000443016 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
USP6NL-203ENST00000443016 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
USP6NL-203ENST00000443016 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
USP6NL-203ENST00000443016 PHLDB1Q86UU1 1377 aa14.21□□□□□ -0.13
USP6NL-203ENST00000443016 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
USP6NL-203ENST00000443016 CDK13Q14004 1512 aaKnown RBP14.2□□□□□ -0.14
USP6NL-203ENST00000443016 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
USP6NL-203ENST00000443016 ARAP3Q8WWN8 1544 aa14.19□□□□□ -0.14
USP6NL-203ENST00000443016 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
USP6NL-203ENST00000443016 NEO1Q92859 1461 aa14.18□□□□□ -0.14
USP6NL-203ENST00000443016 HECW1Q76N89 1606 aa14.17□□□□□ -0.14
USP6NL-203ENST00000443016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP6NL-203ENST00000443016 FANCAO15360 1455 aa14.14□□□□□ -0.15
USP6NL-203ENST00000443016 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
USP6NL-203ENST00000443016 CLIP1P30622 1438 aa14.11□□□□□ -0.15
USP6NL-203ENST00000443016 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
USP6NL-203ENST00000443016 DENND4BO75064 1496 aaPredicted RBP14.1□□□□□ -0.15
USP6NL-203ENST00000443016 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
USP6NL-203ENST00000443016 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
USP6NL-203ENST00000443016 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
USP6NL-203ENST00000443016 EFCAB2Q5VUJ9 269 aa14.08□□□□□ -0.15
USP6NL-203ENST00000443016 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.15
USP6NL-203ENST00000443016 PLCH2O75038 1416 aa14.08□□□□□ -0.16
USP6NL-203ENST00000443016 CCDC18Q5T9S5 1454 aa14.06□□□□□ -0.16
USP6NL-203ENST00000443016 PCF11O94913 1555 aaKnown RBP14.06□□□□□ -0.16
USP6NL-203ENST00000443016 KIF14Q15058 1648 aa14.06□□□□□ -0.16
USP6NL-203ENST00000443016 SCAPERQ9BY12 1400 aa14.05□□□□□ -0.16
USP6NL-203ENST00000443016 FRMPD1Q5SYB0 1578 aa14.04□□□□□ -0.16
USP6NL-203ENST00000443016 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
USP6NL-203ENST00000443016 ARHGAP5Q13017 1502 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms