RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
NELFE-205ENST00000441998 CUL7Q14999 1698 aa19.09■□□□□ 0.65
NELFE-205ENST00000441998 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
NELFE-205ENST00000441998 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
NELFE-205ENST00000441998 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
NELFE-205ENST00000441998 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
NELFE-205ENST00000441998 CARMIL2Q6F5E8 1435 aa18.93■□□□□ 0.62
NELFE-205ENST00000441998 PTPRGP23470 1445 aa18.9■□□□□ 0.62
NELFE-205ENST00000441998 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
NELFE-205ENST00000441998 IQGAP2Q13576 1575 aa18.85■□□□□ 0.61
NELFE-205ENST00000441998 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
NELFE-205ENST00000441998 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
NELFE-205ENST00000441998 UGGT2Q9NYU1 1516 aa18.81■□□□□ 0.6
NELFE-205ENST00000441998 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
NELFE-205ENST00000441998 ABCC10Q5T3U5 1492 aa18.78■□□□□ 0.6
NELFE-205ENST00000441998 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
NELFE-205ENST00000441998 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
NELFE-205ENST00000441998 EEA1Q15075 1411 aa18.77■□□□□ 0.6
NELFE-205ENST00000441998 FAM69CQ0P6D2 419 aa18.76■□□□□ 0.59
NELFE-205ENST00000441998 ADCY10Q96PN6 1610 aa18.75■□□□□ 0.59
NELFE-205ENST00000441998 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
NELFE-205ENST00000441998 ABCC2Q92887 1545 aa18.74■□□□□ 0.59
NELFE-205ENST00000441998 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
NELFE-205ENST00000441998 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
NELFE-205ENST00000441998 PLB1Q6P1J6 1458 aa18.68■□□□□ 0.58
NELFE-205ENST00000441998 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
NELFE-205ENST00000441998 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
NELFE-205ENST00000441998 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
NELFE-205ENST00000441998 ASXL2Q76L83 1435 aa18.63■□□□□ 0.57
NELFE-205ENST00000441998 DIP2BQ9P265 1576 aa18.63■□□□□ 0.57
NELFE-205ENST00000441998 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
NELFE-205ENST00000441998 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
NELFE-205ENST00000441998 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
NELFE-205ENST00000441998 GLI2P10070 1586 aa18.57■□□□□ 0.56
NELFE-205ENST00000441998 ABCA8O94911 1581 aa18.51■□□□□ 0.55
NELFE-205ENST00000441998 EPRSP07814 1512 aaKnown RBP18.51■□□□□ 0.55
NELFE-205ENST00000441998 WDR7Q9Y4E6 1490 aa18.49■□□□□ 0.55
NELFE-205ENST00000441998 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
NELFE-205ENST00000441998 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
NELFE-205ENST00000441998 KIF21BO75037 1637 aa18.45■□□□□ 0.54
NELFE-205ENST00000441998 ZCCHC11Q5TAX3 1644 aaKnown RBP18.45■□□□□ 0.54
NELFE-205ENST00000441998 TEX14Q8IWB6 1497 aa18.44■□□□□ 0.54
NELFE-205ENST00000441998 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
NELFE-205ENST00000441998 ATP10BO94823 1461 aa18.4■□□□□ 0.54
NELFE-205ENST00000441998 KDM6BO15054 1643 aa18.39■□□□□ 0.53
NELFE-205ENST00000441998 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
NELFE-205ENST00000441998 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
NELFE-205ENST00000441998 CD109Q6YHK3 1445 aa18.38■□□□□ 0.53
NELFE-205ENST00000441998 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
NELFE-205ENST00000441998 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
NELFE-205ENST00000441998 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
NELFE-205ENST00000441998 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
NELFE-205ENST00000441998 FHOD3Q2V2M9 1422 aa18.33■□□□□ 0.53
NELFE-205ENST00000441998 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
NELFE-205ENST00000441998 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
NELFE-205ENST00000441998 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
NELFE-205ENST00000441998 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
NELFE-205ENST00000441998 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
NELFE-205ENST00000441998 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
NELFE-205ENST00000441998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
NELFE-205ENST00000441998 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
NELFE-205ENST00000441998 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
NELFE-205ENST00000441998 ARID3CA6NKF2 412 aa18.28■□□□□ 0.52
NELFE-205ENST00000441998 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
NELFE-205ENST00000441998 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
NELFE-205ENST00000441998 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
NELFE-205ENST00000441998 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
NELFE-205ENST00000441998 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
NELFE-205ENST00000441998 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
NELFE-205ENST00000441998 ABCA9Q8IUA7 1624 aa18.2■□□□□ 0.5
NELFE-205ENST00000441998 NEO1Q92859 1461 aa18.2■□□□□ 0.5
NELFE-205ENST00000441998 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
NELFE-205ENST00000441998 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
NELFE-205ENST00000441998 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
NELFE-205ENST00000441998 PLCH2O75038 1416 aa18.07■□□□□ 0.48
NELFE-205ENST00000441998 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
NELFE-205ENST00000441998 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
NELFE-205ENST00000441998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.483e-7■□□□□ 8.5
NELFE-205ENST00000441998 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
NELFE-205ENST00000441998 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
NELFE-205ENST00000441998 ADGRL1O94910 1474 aa18.06■□□□□ 0.48
NELFE-205ENST00000441998 FANCAO15360 1455 aa18.05■□□□□ 0.48
NELFE-205ENST00000441998 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
NELFE-205ENST00000441998 DENND4BO75064 1496 aaPredicted RBP18.04■□□□□ 0.48
NELFE-205ENST00000441998 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
NELFE-205ENST00000441998 CLIP1P30622 1438 aa18.04■□□□□ 0.48
NELFE-205ENST00000441998 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
NELFE-205ENST00000441998 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
NELFE-205ENST00000441998 MAGI2Q86UL8 1455 aa17.98■□□□□ 0.47
NELFE-205ENST00000441998 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
NELFE-205ENST00000441998 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
NELFE-205ENST00000441998 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
NELFE-205ENST00000441998 KIF14Q15058 1648 aa17.92■□□□□ 0.46
NELFE-205ENST00000441998 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
NELFE-205ENST00000441998 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
NELFE-205ENST00000441998 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
NELFE-205ENST00000441998 PCF11O94913 1555 aaKnown RBP17.89■□□□□ 0.45
NELFE-205ENST00000441998 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
NELFE-205ENST00000441998 ZNF518AQ6AHZ1 1483 aa17.86■□□□□ 0.45
NELFE-205ENST00000441998 RICTORQ6R327 1708 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms