RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
TNFRSF1A-204ENST00000440083 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
TNFRSF1A-204ENST00000440083 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
TNFRSF1A-204ENST00000440083 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
TNFRSF1A-204ENST00000440083 KIAA0586Q9BVV6 1533 aa23.9■■□□□ 1.42
TNFRSF1A-204ENST00000440083 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
TNFRSF1A-204ENST00000440083 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
TNFRSF1A-204ENST00000440083 PRG4Q92954 1404 aaPredicted RBP23.83■■□□□ 1.4
TNFRSF1A-204ENST00000440083 IQGAP2Q13576 1575 aa23.82■■□□□ 1.4
TNFRSF1A-204ENST00000440083 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
TNFRSF1A-204ENST00000440083 KIF21BO75037 1637 aa23.78■■□□□ 1.4
TNFRSF1A-204ENST00000440083 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
TNFRSF1A-204ENST00000440083 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
TNFRSF1A-204ENST00000440083 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
TNFRSF1A-204ENST00000440083 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
TNFRSF1A-204ENST00000440083 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
TNFRSF1A-204ENST00000440083 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
TNFRSF1A-204ENST00000440083 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
TNFRSF1A-204ENST00000440083 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF1A-204ENST00000440083 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-204ENST00000440083 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF1A-204ENST00000440083 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
TNFRSF1A-204ENST00000440083 PTPRGP23470 1445 aa23.54■■□□□ 1.36
TNFRSF1A-204ENST00000440083 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
TNFRSF1A-204ENST00000440083 P3H3Q8IVL6 736 aa23.49■■□□□ 1.35
TNFRSF1A-204ENST00000440083 ADCY10Q96PN6 1610 aa23.48■■□□□ 1.35
TNFRSF1A-204ENST00000440083 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
TNFRSF1A-204ENST00000440083 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
TNFRSF1A-204ENST00000440083 EFCAB5A4FU69 1503 aa23.39■■□□□ 1.34
TNFRSF1A-204ENST00000440083 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
TNFRSF1A-204ENST00000440083 PLB1Q6P1J6 1458 aa23.38■■□□□ 1.33
TNFRSF1A-204ENST00000440083 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
TNFRSF1A-204ENST00000440083 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
TNFRSF1A-204ENST00000440083 ABCA8O94911 1581 aa23.35■■□□□ 1.33
TNFRSF1A-204ENST00000440083 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
TNFRSF1A-204ENST00000440083 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
TNFRSF1A-204ENST00000440083 ZCCHC11Q5TAX3 1644 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1A-204ENST00000440083 KDM5BQ9UGL1 1544 aa23.24■■□□□ 1.31
TNFRSF1A-204ENST00000440083 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
TNFRSF1A-204ENST00000440083 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF1A-204ENST00000440083 CLIP1P30622 1438 aa23.24■■□□□ 1.31
TNFRSF1A-204ENST00000440083 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
TNFRSF1A-204ENST00000440083 ARID3CA6NKF2 412 aa23.23■■□□□ 1.31
TNFRSF1A-204ENST00000440083 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
TNFRSF1A-204ENST00000440083 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1A-204ENST00000440083 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
TNFRSF1A-204ENST00000440083 ATP10BO94823 1461 aa23.14■■□□□ 1.29
TNFRSF1A-204ENST00000440083 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
TNFRSF1A-204ENST00000440083 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
TNFRSF1A-204ENST00000440083 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
TNFRSF1A-204ENST00000440083 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
TNFRSF1A-204ENST00000440083 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-204ENST00000440083 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.28
TNFRSF1A-204ENST00000440083 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
TNFRSF1A-204ENST00000440083 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
TNFRSF1A-204ENST00000440083 HECW1Q76N89 1606 aa23.07■■□□□ 1.28
TNFRSF1A-204ENST00000440083 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF1A-204ENST00000440083 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-204ENST00000440083 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
TNFRSF1A-204ENST00000440083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-204ENST00000440083 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-204ENST00000440083 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
TNFRSF1A-204ENST00000440083 GLI2P10070 1586 aa22.98■■□□□ 1.27
TNFRSF1A-204ENST00000440083 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
TNFRSF1A-204ENST00000440083 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
TNFRSF1A-204ENST00000440083 TSPOAP1O95153 1857 aa22.95■■□□□ 1.26
TNFRSF1A-204ENST00000440083 MAP3K4Q9Y6R4 1608 aa22.91■■□□□ 1.26
TNFRSF1A-204ENST00000440083 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1A-204ENST00000440083 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
TNFRSF1A-204ENST00000440083 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
TNFRSF1A-204ENST00000440083 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
TNFRSF1A-204ENST00000440083 CFAP43Q8NDM7 1665 aa22.85■■□□□ 1.25
TNFRSF1A-204ENST00000440083 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
TNFRSF1A-204ENST00000440083 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
TNFRSF1A-204ENST00000440083 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
TNFRSF1A-204ENST00000440083 KIF14Q15058 1648 aa22.82■■□□□ 1.24
TNFRSF1A-204ENST00000440083 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-204ENST00000440083 TTC37Q6PGP7 1564 aa22.81■■□□□ 1.24
TNFRSF1A-204ENST00000440083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.8■■□□□ 1.24
TNFRSF1A-204ENST00000440083 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1A-204ENST00000440083 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
TNFRSF1A-204ENST00000440083 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
TNFRSF1A-204ENST00000440083 KDM6BO15054 1643 aa22.7■■□□□ 1.22
TNFRSF1A-204ENST00000440083 MTUS2Q5JR59 1369 aa22.68■■□□□ 1.22
TNFRSF1A-204ENST00000440083 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-204ENST00000440083 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
TNFRSF1A-204ENST00000440083 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
TNFRSF1A-204ENST00000440083 PLCH2O75038 1416 aa22.62■■□□□ 1.21
TNFRSF1A-204ENST00000440083 FANCAO15360 1455 aa22.61■■□□□ 1.21
TNFRSF1A-204ENST00000440083 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
TNFRSF1A-204ENST00000440083 NEO1Q92859 1461 aa22.6■■□□□ 1.21
TNFRSF1A-204ENST00000440083 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-204ENST00000440083 MAP3K1Q13233 1512 aa22.6■■□□□ 1.21
TNFRSF1A-204ENST00000440083 PREX2Q70Z35 1606 aa22.59■■□□□ 1.21
TNFRSF1A-204ENST00000440083 CDC42BPAQ5VT25 1732 aa22.59■■□□□ 1.21
TNFRSF1A-204ENST00000440083 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
TNFRSF1A-204ENST00000440083 CDC42BPBQ9Y5S2 1711 aa22.58■■□□□ 1.21
TNFRSF1A-204ENST00000440083 CFAP74Q9C0B2 1584 aa22.58■■□□□ 1.2
TNFRSF1A-204ENST00000440083 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
TNFRSF1A-204ENST00000440083 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms