RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.26
CPSF7-205ENST00000439958 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
CPSF7-205ENST00000439958 ITGAEP38570 1179 aa22.94■■□□□ 1.26
CPSF7-205ENST00000439958 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
CPSF7-205ENST00000439958 WDR62O43379 1518 aa22.92■■□□□ 1.26
CPSF7-205ENST00000439958 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
CPSF7-205ENST00000439958 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
CPSF7-205ENST00000439958 GRIN2BQ13224 1484 aa22.89■■□□□ 1.26
CPSF7-205ENST00000439958 CUL7Q14999 1698 aa22.87■■□□□ 1.25
CPSF7-205ENST00000439958 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
CPSF7-205ENST00000439958 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
CPSF7-205ENST00000439958 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
CPSF7-205ENST00000439958 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
CPSF7-205ENST00000439958 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
CPSF7-205ENST00000439958 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
CPSF7-205ENST00000439958 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
CPSF7-205ENST00000439958 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
CPSF7-205ENST00000439958 CTTNBP2Q8WZ74 1663 aa22.66■■□□□ 1.22
CPSF7-205ENST00000439958 FMN1Q68DA7 1419 aa22.63■■□□□ 1.21
CPSF7-205ENST00000439958 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
CPSF7-205ENST00000439958 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
CPSF7-205ENST00000439958 PCF11O94913 1555 aaKnown RBP22.6■■□□□ 1.21
CPSF7-205ENST00000439958 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
CPSF7-205ENST00000439958 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
CPSF7-205ENST00000439958 IQGAP2Q13576 1575 aa22.58■■□□□ 1.21
CPSF7-205ENST00000439958 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
CPSF7-205ENST00000439958 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
CPSF7-205ENST00000439958 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
CPSF7-205ENST00000439958 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
CPSF7-205ENST00000439958 KIAA0586Q9BVV6 1533 aa22.51■■□□□ 1.19
CPSF7-205ENST00000439958 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
CPSF7-205ENST00000439958 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
CPSF7-205ENST00000439958 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CPSF7-205ENST00000439958 FYCO1Q9BQS8 1478 aa22.48■■□□□ 1.19
CPSF7-205ENST00000439958 PHLDB1Q86UU1 1377 aa22.47■■□□□ 1.19
CPSF7-205ENST00000439958 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
CPSF7-205ENST00000439958 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
CPSF7-205ENST00000439958 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
CPSF7-205ENST00000439958 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
CPSF7-205ENST00000439958 DISP1Q96F81 1524 aa22.34■■□□□ 1.17
CPSF7-205ENST00000439958 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
CPSF7-205ENST00000439958 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
CPSF7-205ENST00000439958 ZNF777Q9ULD5 760 aaPredicted RBP22.34■■□□□ 1.17
CPSF7-205ENST00000439958 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.16
CPSF7-205ENST00000439958 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
CPSF7-205ENST00000439958 PLB1Q6P1J6 1458 aa22.32■■□□□ 1.16
CPSF7-205ENST00000439958 NUP160Q12769 1436 aa22.3■■□□□ 1.16
CPSF7-205ENST00000439958 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
CPSF7-205ENST00000439958 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
CPSF7-205ENST00000439958 EPRSP07814 1512 aaKnown RBP22.28■■□□□ 1.16
CPSF7-205ENST00000439958 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
CPSF7-205ENST00000439958 NCOA2Q15596 1464 aa22.25■■□□□ 1.15
CPSF7-205ENST00000439958 PTPRGP23470 1445 aa22.25■■□□□ 1.15
CPSF7-205ENST00000439958 CFAP43Q8NDM7 1665 aa22.24■■□□□ 1.15
CPSF7-205ENST00000439958 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
CPSF7-205ENST00000439958 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
CPSF7-205ENST00000439958 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
CPSF7-205ENST00000439958 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
CPSF7-205ENST00000439958 CHD1O14646 1710 aa22.21■■□□□ 1.15
CPSF7-205ENST00000439958 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
CPSF7-205ENST00000439958 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
CPSF7-205ENST00000439958 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
CPSF7-205ENST00000439958 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
CPSF7-205ENST00000439958 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
CPSF7-205ENST00000439958 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
CPSF7-205ENST00000439958 LRRIQ1Q96JM4 1722 aa22.15■■□□□ 1.14
CPSF7-205ENST00000439958 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
CPSF7-205ENST00000439958 MYOM3Q5VTT5 1437 aa22.15■■□□□ 1.14
CPSF7-205ENST00000439958 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.13
CPSF7-205ENST00000439958 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
CPSF7-205ENST00000439958 RAPGEF6Q8TEU7 1601 aa22.12■■□□□ 1.13
CPSF7-205ENST00000439958 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
CPSF7-205ENST00000439958 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
CPSF7-205ENST00000439958 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.12
CPSF7-205ENST00000439958 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
CPSF7-205ENST00000439958 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
CPSF7-205ENST00000439958 ERCC6L2Q5T890 1561 aa22.05■■□□□ 1.12
CPSF7-205ENST00000439958 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
CPSF7-205ENST00000439958 ATP10BO94823 1461 aa21.99■■□□□ 1.11
CPSF7-205ENST00000439958 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
CPSF7-205ENST00000439958 PTPRKQ15262 1439 aa21.98■■□□□ 1.11
CPSF7-205ENST00000439958 UACAQ9BZF9 1416 aa21.98■■□□□ 1.11
CPSF7-205ENST00000439958 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
CPSF7-205ENST00000439958 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
CPSF7-205ENST00000439958 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
CPSF7-205ENST00000439958 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.09
CPSF7-205ENST00000439958 ABCA8O94911 1581 aa21.88■■□□□ 1.09
CPSF7-205ENST00000439958 KIF14Q15058 1648 aa21.88■■□□□ 1.09
CPSF7-205ENST00000439958 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
CPSF7-205ENST00000439958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.091e-11■■□□□ 12.1
CPSF7-205ENST00000439958 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
CPSF7-205ENST00000439958 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
CPSF7-205ENST00000439958 FOXD1Q16676 465 aa21.86■■□□□ 1.09
CPSF7-205ENST00000439958 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
CPSF7-205ENST00000439958 GPATCH8Q9UKJ3 1502 aaKnown RBP21.83■■□□□ 1.08
CPSF7-205ENST00000439958 NAIPQ13075 1403 aa21.82■■□□□ 1.08
CPSF7-205ENST00000439958 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
CPSF7-205ENST00000439958 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
CPSF7-205ENST00000439958 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
CPSF7-205ENST00000439958 ZNF316A6NFI3 1004 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms