RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
AC012494.1-201ENST00000439259 SOGA1O94964 1423 aa14.61□□□□□ -0.07
AC012494.1-201ENST00000439259 CUX1P39880 1505 aa14.61□□□□□ -0.07
AC012494.1-201ENST00000439259 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
AC012494.1-201ENST00000439259 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
AC012494.1-201ENST00000439259 FBLN2P98095 1184 aa14.58□□□□□ -0.08
AC012494.1-201ENST00000439259 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
AC012494.1-201ENST00000439259 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
AC012494.1-201ENST00000439259 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
AC012494.1-201ENST00000439259 POLA2Q14181 598 aa14.53□□□□□ -0.08
AC012494.1-201ENST00000439259 CHD1O14646 1710 aa14.52□□□□□ -0.08
AC012494.1-201ENST00000439259 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
AC012494.1-201ENST00000439259 ZBTB22O15209 634 aa14.51□□□□□ -0.09
AC012494.1-201ENST00000439259 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
AC012494.1-201ENST00000439259 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
AC012494.1-201ENST00000439259 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
AC012494.1-201ENST00000439259 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
AC012494.1-201ENST00000439259 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
AC012494.1-201ENST00000439259 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
AC012494.1-201ENST00000439259 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
AC012494.1-201ENST00000439259 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
AC012494.1-201ENST00000439259 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
AC012494.1-201ENST00000439259 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
AC012494.1-201ENST00000439259 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
AC012494.1-201ENST00000439259 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
AC012494.1-201ENST00000439259 ARAP1Q96P48 1450 aa14.39□□□□□ -0.11
AC012494.1-201ENST00000439259 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
AC012494.1-201ENST00000439259 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
AC012494.1-201ENST00000439259 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
AC012494.1-201ENST00000439259 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
AC012494.1-201ENST00000439259 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
AC012494.1-201ENST00000439259 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
AC012494.1-201ENST00000439259 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
AC012494.1-201ENST00000439259 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
AC012494.1-201ENST00000439259 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
AC012494.1-201ENST00000439259 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
AC012494.1-201ENST00000439259 POTEHQ6S545 545 aa14.25□□□□□ -0.13
AC012494.1-201ENST00000439259 FHAD1B1AJZ9 1412 aa14.24□□□□□ -0.13
AC012494.1-201ENST00000439259 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
AC012494.1-201ENST00000439259 NUP160Q12769 1436 aa14.22□□□□□ -0.13
AC012494.1-201ENST00000439259 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
AC012494.1-201ENST00000439259 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
AC012494.1-201ENST00000439259 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
AC012494.1-201ENST00000439259 IGF1RP08069 1367 aa14.11□□□□□ -0.15
AC012494.1-201ENST00000439259 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
AC012494.1-201ENST00000439259 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
AC012494.1-201ENST00000439259 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
AC012494.1-201ENST00000439259 KIF27Q86VH2 1401 aa14.09□□□□□ -0.15
AC012494.1-201ENST00000439259 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
AC012494.1-201ENST00000439259 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
AC012494.1-201ENST00000439259 CARMIL1Q5VZK9 1371 aa14.02□□□□□ -0.17
AC012494.1-201ENST00000439259 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
AC012494.1-201ENST00000439259 CUL7Q14999 1698 aa14□□□□□ -0.17
AC012494.1-201ENST00000439259 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
AC012494.1-201ENST00000439259 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
AC012494.1-201ENST00000439259 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
AC012494.1-201ENST00000439259 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
AC012494.1-201ENST00000439259 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
AC012494.1-201ENST00000439259 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
AC012494.1-201ENST00000439259 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
AC012494.1-201ENST00000439259 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
AC012494.1-201ENST00000439259 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
AC012494.1-201ENST00000439259 PTPRGP23470 1445 aa13.88□□□□□ -0.19
AC012494.1-201ENST00000439259 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
AC012494.1-201ENST00000439259 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
AC012494.1-201ENST00000439259 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
AC012494.1-201ENST00000439259 ABCC10Q5T3U5 1492 aa13.85□□□□□ -0.19
AC012494.1-201ENST00000439259 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
AC012494.1-201ENST00000439259 CARMIL2Q6F5E8 1435 aa13.84□□□□□ -0.19
AC012494.1-201ENST00000439259 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
AC012494.1-201ENST00000439259 DISP1Q96F81 1524 aa13.84□□□□□ -0.19
AC012494.1-201ENST00000439259 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
AC012494.1-201ENST00000439259 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
AC012494.1-201ENST00000439259 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
AC012494.1-201ENST00000439259 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
AC012494.1-201ENST00000439259 ABCC2Q92887 1545 aa13.77□□□□□ -0.21
AC012494.1-201ENST00000439259 UACAQ9BZF9 1416 aa13.76□□□□□ -0.21
AC012494.1-201ENST00000439259 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
AC012494.1-201ENST00000439259 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
AC012494.1-201ENST00000439259 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
AC012494.1-201ENST00000439259 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
AC012494.1-201ENST00000439259 ASXL2Q76L83 1435 aa13.74□□□□□ -0.21
AC012494.1-201ENST00000439259 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
AC012494.1-201ENST00000439259 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
AC012494.1-201ENST00000439259 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
AC012494.1-201ENST00000439259 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
AC012494.1-201ENST00000439259 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
AC012494.1-201ENST00000439259 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
AC012494.1-201ENST00000439259 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
AC012494.1-201ENST00000439259 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
AC012494.1-201ENST00000439259 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
AC012494.1-201ENST00000439259 ZCCHC11Q5TAX3 1644 aaKnown RBP13.67□□□□□ -0.22
AC012494.1-201ENST00000439259 KDM6BO15054 1643 aa13.66□□□□□ -0.22
AC012494.1-201ENST00000439259 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
AC012494.1-201ENST00000439259 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
AC012494.1-201ENST00000439259 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
AC012494.1-201ENST00000439259 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
AC012494.1-201ENST00000439259 GLI2P10070 1586 aa13.64□□□□□ -0.23
AC012494.1-201ENST00000439259 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
AC012494.1-201ENST00000439259 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms