RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
ERCC8-203ENST00000439176 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
ERCC8-203ENST00000439176 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
ERCC8-203ENST00000439176 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
ERCC8-203ENST00000439176 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
ERCC8-203ENST00000439176 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-203ENST00000439176 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-203ENST00000439176 CUX1P39880 1505 aa12.11□□□□□ -0.47
ERCC8-203ENST00000439176 CHD1O14646 1710 aa12.11□□□□□ -0.47
ERCC8-203ENST00000439176 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
ERCC8-203ENST00000439176 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
ERCC8-203ENST00000439176 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
ERCC8-203ENST00000439176 APLP2Q06481 763 aa12.09□□□□□ -0.47
ERCC8-203ENST00000439176 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
ERCC8-203ENST00000439176 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
ERCC8-203ENST00000439176 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
ERCC8-203ENST00000439176 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
ERCC8-203ENST00000439176 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
ERCC8-203ENST00000439176 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
ERCC8-203ENST00000439176 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
ERCC8-203ENST00000439176 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
ERCC8-203ENST00000439176 ZBTB22O15209 634 aa12□□□□□ -0.49
ERCC8-203ENST00000439176 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
ERCC8-203ENST00000439176 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
ERCC8-203ENST00000439176 CLASP1Q7Z460 1538 aa11.99□□□□□ -0.49
ERCC8-203ENST00000439176 PBRM1Q86U86 1689 aa11.98□□□□□ -0.49
ERCC8-203ENST00000439176 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
ERCC8-203ENST00000439176 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
ERCC8-203ENST00000439176 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
ERCC8-203ENST00000439176 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
ERCC8-203ENST00000439176 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
ERCC8-203ENST00000439176 FHAD1B1AJZ9 1412 aa11.9□□□□□ -0.5
ERCC8-203ENST00000439176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-203ENST00000439176 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
ERCC8-203ENST00000439176 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
ERCC8-203ENST00000439176 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
ERCC8-203ENST00000439176 NUP160Q12769 1436 aa11.86□□□□□ -0.51
ERCC8-203ENST00000439176 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
ERCC8-203ENST00000439176 CEP170Q5SW79 1584 aa11.83□□□□□ -0.52
ERCC8-203ENST00000439176 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
ERCC8-203ENST00000439176 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
ERCC8-203ENST00000439176 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
ERCC8-203ENST00000439176 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
ERCC8-203ENST00000439176 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
ERCC8-203ENST00000439176 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.53
ERCC8-203ENST00000439176 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
ERCC8-203ENST00000439176 IGF1RP08069 1367 aa11.74□□□□□ -0.53
ERCC8-203ENST00000439176 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
ERCC8-203ENST00000439176 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
ERCC8-203ENST00000439176 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
ERCC8-203ENST00000439176 CUL7Q14999 1698 aa11.7□□□□□ -0.54
ERCC8-203ENST00000439176 POLA2Q14181 598 aa11.69□□□□□ -0.54
ERCC8-203ENST00000439176 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
ERCC8-203ENST00000439176 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
ERCC8-203ENST00000439176 HAX1O00165 279 aa11.65□□□□□ -0.54
ERCC8-203ENST00000439176 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
ERCC8-203ENST00000439176 CARMIL2Q6F5E8 1435 aa11.64□□□□□ -0.55
ERCC8-203ENST00000439176 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
ERCC8-203ENST00000439176 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
ERCC8-203ENST00000439176 PTPRGP23470 1445 aa11.62□□□□□ -0.55
ERCC8-203ENST00000439176 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
ERCC8-203ENST00000439176 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
ERCC8-203ENST00000439176 ABCC10Q5T3U5 1492 aa11.61□□□□□ -0.55
ERCC8-203ENST00000439176 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
ERCC8-203ENST00000439176 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
ERCC8-203ENST00000439176 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
ERCC8-203ENST00000439176 ADCY10Q96PN6 1610 aa11.58□□□□□ -0.56
ERCC8-203ENST00000439176 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
ERCC8-203ENST00000439176 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
ERCC8-203ENST00000439176 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
ERCC8-203ENST00000439176 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-203ENST00000439176 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-203ENST00000439176 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
ERCC8-203ENST00000439176 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
ERCC8-203ENST00000439176 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
ERCC8-203ENST00000439176 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
ERCC8-203ENST00000439176 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
ERCC8-203ENST00000439176 UGGT2Q9NYU1 1516 aa11.5□□□□□ -0.57
ERCC8-203ENST00000439176 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
ERCC8-203ENST00000439176 KDM6BO15054 1643 aa11.47□□□□□ -0.57
ERCC8-203ENST00000439176 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
ERCC8-203ENST00000439176 TSPOAP1O95153 1857 aa11.46□□□□□ -0.57
ERCC8-203ENST00000439176 KIAA0556O60303 1618 aa11.45□□□□□ -0.58
ERCC8-203ENST00000439176 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
ERCC8-203ENST00000439176 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
ERCC8-203ENST00000439176 GLI2P10070 1586 aa11.44□□□□□ -0.58
ERCC8-203ENST00000439176 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
ERCC8-203ENST00000439176 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
ERCC8-203ENST00000439176 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
ERCC8-203ENST00000439176 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
ERCC8-203ENST00000439176 EVX2Q03828 476 aa11.41□□□□□ -0.58
ERCC8-203ENST00000439176 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
ERCC8-203ENST00000439176 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
ERCC8-203ENST00000439176 ZCCHC11Q5TAX3 1644 aaKnown RBP11.39□□□□□ -0.59
ERCC8-203ENST00000439176 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
ERCC8-203ENST00000439176 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
ERCC8-203ENST00000439176 EEA1Q15075 1411 aa11.35□□□□□ -0.59
ERCC8-203ENST00000439176 KDM4FA0A1W2PPD8 638 aa11.35□□□□□ -0.59
ERCC8-203ENST00000439176 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
ERCC8-203ENST00000439176 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms