RNA–Protein interactions for RNA: ENST00000439161.5

GGA1-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-212ENST00000439161 KIAA0586Q9BVV6 1533 aa38.87■■■■□ 3.81
GGA1-212ENST00000439161 CTTNBP2Q8WZ74 1663 aa38.87■■■■□ 3.81
GGA1-212ENST00000439161 UBTFP17480 764 aaKnown RBP38.83■■■■□ 3.81
GGA1-212ENST00000439161 IQGAP2Q13576 1575 aa38.77■■■■□ 3.8
GGA1-212ENST00000439161 LOC105371045A0A1W2PR82 267 aa38.7■■■■□ 3.79
GGA1-212ENST00000439161 JPH4Q96JJ6 628 aa38.68■■■■□ 3.78
GGA1-212ENST00000439161 SHROOM2Q13796 1616 aa38.67■■■■□ 3.78
GGA1-212ENST00000439161 TNIKQ9UKE5 1360 aa38.62■■■■□ 3.77
GGA1-212ENST00000439161 UGGT2Q9NYU1 1516 aa38.58■■■■□ 3.77
GGA1-212ENST00000439161 PRG4Q92954 1404 aaPredicted RBP38.54■■■■□ 3.76
GGA1-212ENST00000439161 RANGAP1P46060 587 aaPredicted RBP38.48■■■■□ 3.75
GGA1-212ENST00000439161 DNAJC5Q9H3Z4 198 aa38.48■■■■□ 3.75
GGA1-212ENST00000439161 CARMIL2Q6F5E8 1435 aa38.46■■■■□ 3.75
GGA1-212ENST00000439161 ERCC6L2Q5T890 1561 aa38.44■■■■□ 3.74
GGA1-212ENST00000439161 ARHGEF11O15085 1522 aa38.43■■■■□ 3.74
GGA1-212ENST00000439161 DISP1Q96F81 1524 aa38.43■■■■□ 3.74
GGA1-212ENST00000439161 KIAA0556O60303 1618 aa38.39■■■■□ 3.74
GGA1-212ENST00000439161 RIMBP3CA6NJZ7 1639 aa38.38■■■■□ 3.74
GGA1-212ENST00000439161 RIMBP3BA6NNM3 1639 aa38.38■■■■□ 3.74
GGA1-212ENST00000439161 RIMBP3Q9UFD9 1639 aa38.38■■■■□ 3.74
GGA1-212ENST00000439161 SAMD9Q5K651 1589 aa38.38■■■■□ 3.73
GGA1-212ENST00000439161 EFCAB5A4FU69 1503 aa38.37■■■■□ 3.73
GGA1-212ENST00000439161 CLIP1P30622 1438 aa38.3■■■■□ 3.72
GGA1-212ENST00000439161 CEP162Q5TB80 1403 aa38.3■■■■□ 3.72
GGA1-212ENST00000439161 P3H3Q8IVL6 736 aa38.28■■■■□ 3.72
GGA1-212ENST00000439161 ARHGAP35Q9NRY4 1499 aa38.27■■■■□ 3.72
GGA1-212ENST00000439161 ARAP1Q96P48 1450 aa38.19■■■■□ 3.7
GGA1-212ENST00000439161 FHOD3Q2V2M9 1422 aa38.19■■■■□ 3.7
GGA1-212ENST00000439161 PTPRGP23470 1445 aa38.18■■■■□ 3.7
GGA1-212ENST00000439161 TTBK1Q5TCY1 1321 aaPredicted RBP38.16■■■■□ 3.7
GGA1-212ENST00000439161 CYB5RLQ6IPT4 315 aa38.06■■■■□ 3.68
GGA1-212ENST00000439161 FMN1Q68DA7 1419 aa38■■■■□ 3.67
GGA1-212ENST00000439161 UACAQ9BZF9 1416 aa37.94■■■■□ 3.66
GGA1-212ENST00000439161 PLB1Q6P1J6 1458 aa37.93■■■■□ 3.66
GGA1-212ENST00000439161 ABCA8O94911 1581 aa37.92■■■■□ 3.66
GGA1-212ENST00000439161 RAPGEF6Q8TEU7 1601 aa37.88■■■■□ 3.65
GGA1-212ENST00000439161 UHRF1BP1LA0JNW5 1464 aa37.86■■■■□ 3.65
GGA1-212ENST00000439161 ABCC2Q92887 1545 aa37.86■■■■□ 3.65
GGA1-212ENST00000439161 ADCY10Q96PN6 1610 aa37.85■■■■□ 3.65
GGA1-212ENST00000439161 VPS8Q8N3P4 1428 aa37.79■■■■□ 3.64
GGA1-212ENST00000439161 PCF11O94913 1555 aaKnown RBP37.78■■■■□ 3.64
GGA1-212ENST00000439161 CASKIN1Q8WXD9 1431 aa37.78■■■■□ 3.64
GGA1-212ENST00000439161 HECW1Q76N89 1606 aa37.74■■■■□ 3.63
GGA1-212ENST00000439161 ATP1B4Q9UN42 357 aaPredicted RBP37.74■■■■□ 3.63
GGA1-212ENST00000439161 FYCO1Q9BQS8 1478 aa37.73■■■■□ 3.63
GGA1-212ENST00000439161 NUP153P49790 1475 aaKnown RBP37.72■■■■□ 3.63
GGA1-212ENST00000439161 NPM1P06748 294 aaKnown RBP eCLIP37.68■■■■□ 3.62
GGA1-212ENST00000439161 KDM5BQ9UGL1 1544 aa37.66■■■■□ 3.62
GGA1-212ENST00000439161 ARID3CA6NKF2 412 aa37.64■■■■□ 3.62
GGA1-212ENST00000439161 ZCCHC11Q5TAX3 1644 aaKnown RBP37.62■■■■□ 3.61
GGA1-212ENST00000439161 ATP10BO94823 1461 aa37.61■■■■□ 3.61
GGA1-212ENST00000439161 EPRSP07814 1512 aaKnown RBP37.6■■■■□ 3.61
GGA1-212ENST00000439161 LRRIQ1Q96JM4 1722 aa37.58■■■■□ 3.61
GGA1-212ENST00000439161 CCDC18Q5T9S5 1454 aa37.56■■■■□ 3.6
GGA1-212ENST00000439161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.55■■■■□ 3.6
GGA1-212ENST00000439161 HNRNPUL2Q1KMD3 747 aaKnown RBP37.55■■■■□ 3.6
GGA1-212ENST00000439161 CDK13Q14004 1512 aaKnown RBP37.55■■■■□ 3.6
GGA1-212ENST00000439161 MAPKBP1O60336 1514 aa37.46■■■■□ 3.59
GGA1-212ENST00000439161 ASXL2Q76L83 1435 aa37.42■■■■□ 3.58
GGA1-212ENST00000439161 APLP2Q06481 763 aa37.4■■■■□ 3.58
GGA1-212ENST00000439161 CDK11AQ9UQ88 783 aaPredicted RBP37.4■■■■□ 3.58
GGA1-212ENST00000439161 CFAP43Q8NDM7 1665 aa37.4■■■■□ 3.58
GGA1-212ENST00000439161 PLEKHD1A6NEE1 506 aa37.38■■■■□ 3.57
GGA1-212ENST00000439161 TIAM1Q13009 1591 aa37.38■■■■□ 3.57
GGA1-212ENST00000439161 MAP3K1Q13233 1512 aa37.37■■■■□ 3.57
GGA1-212ENST00000439161 WDR7Q9Y4E6 1490 aa37.35■■■■□ 3.57
GGA1-212ENST00000439161 TROQ12816 1431 aaPredicted RBP37.27■■■■□ 3.56
GGA1-212ENST00000439161 MAGI3Q5TCQ9 1506 aa37.26■■■■□ 3.56
GGA1-212ENST00000439161 MTUS2Q5JR59 1369 aa37.25■■■■□ 3.55
GGA1-212ENST00000439161 KCNH8Q96L42 1107 aa37.23■■■■□ 3.55
GGA1-212ENST00000439161 EHBP1L1Q8N3D4 1523 aa37.2■■■■□ 3.55
GGA1-212ENST00000439161 LRRC9Q6ZRR7 1453 aa37.2■■■■□ 3.54
GGA1-212ENST00000439161 ABCC10Q5T3U5 1492 aa37.19■■■■□ 3.54
GGA1-212ENST00000439161 DIP2BQ9P265 1576 aa37.17■■■■□ 3.54
GGA1-212ENST00000439161 KANK4Q5T7N3 995 aaPredicted RBP37.16■■■■□ 3.54
GGA1-212ENST00000439161 KIF14Q15058 1648 aa37.14■■■■□ 3.54
GGA1-212ENST00000439161 GLI2P10070 1586 aa37.11■■■■□ 3.53
GGA1-212ENST00000439161 FAM69CQ0P6D2 419 aa37.1■■■■□ 3.53
GGA1-212ENST00000439161 KIF13AQ9H1H9 1805 aa37.09■■■■□ 3.53
GGA1-212ENST00000439161 TRHP20396 242 aaPredicted RBP37.06■■■■□ 3.52
GGA1-212ENST00000439161 SUPT6HQ7KZ85 1726 aaKnown RBP37.06■■■■□ 3.52
GGA1-212ENST00000439161 ABCA9Q8IUA7 1624 aa37.05■■■■□ 3.52
GGA1-212ENST00000439161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.05■■■■□ 3.52
GGA1-212ENST00000439161 TTC37Q6PGP7 1564 aa37■■■■□ 3.51
GGA1-212ENST00000439161 MAP3K4Q9Y6R4 1608 aa36.97■■■■□ 3.51
GGA1-212ENST00000439161 NCOA2Q15596 1464 aa36.97■■■■□ 3.51
GGA1-212ENST00000439161 PPARGC1BQ86YN6 1023 aaKnown RBP36.97■■■■□ 3.51
GGA1-212ENST00000439161 CD109Q6YHK3 1445 aa36.93■■■■□ 3.5
GGA1-212ENST00000439161 MYO5CQ9NQX4 1742 aa36.9■■■■□ 3.5
GGA1-212ENST00000439161 CCNB3Q8WWL7 1395 aa36.9■■■■□ 3.5
GGA1-212ENST00000439161 TSPOAP1O95153 1857 aa36.87■■■■□ 3.49
GGA1-212ENST00000439161 CDC42BPAQ5VT25 1732 aa36.85■■■■□ 3.49
GGA1-212ENST00000439161 PLCH2O75038 1416 aa36.84■■■■□ 3.49
GGA1-212ENST00000439161 GPATCH8Q9UKJ3 1502 aaKnown RBP36.83■■■■□ 3.49
GGA1-212ENST00000439161 PREX2Q70Z35 1606 aa36.82■■■■□ 3.49
GGA1-212ENST00000439161 ITSN2Q9NZM3 1697 aa36.82■■■■□ 3.48
GGA1-212ENST00000439161 PPRC1Q5VV67 1664 aaKnown RBP36.79■■■■□ 3.48
GGA1-212ENST00000439161 ARAP3Q8WWN8 1544 aa36.79■■■■□ 3.48
GGA1-212ENST00000439161 CDC42BPBQ9Y5S2 1711 aa36.79■■■■□ 3.48
GGA1-212ENST00000439161 PHLDB1Q86UU1 1377 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms