RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 FAM69CQ0P6D2 419 aa25.29■■□□□ 1.64
LINC01088-201ENST00000437737 NPM1P06748 294 aaKnown RBP eCLIP25.28■■□□□ 1.64
LINC01088-201ENST00000437737 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
LINC01088-201ENST00000437737 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
LINC01088-201ENST00000437737 MAPKBP1O60336 1514 aa25.24■■□□□ 1.63
LINC01088-201ENST00000437737 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
LINC01088-201ENST00000437737 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
LINC01088-201ENST00000437737 KDM6BO15054 1643 aa25.17■■□□□ 1.62
LINC01088-201ENST00000437737 TSPOAP1O95153 1857 aa25.15■■□□□ 1.62
LINC01088-201ENST00000437737 KDM4FA0A1W2PPD8 638 aa25.06■■□□□ 1.6
LINC01088-201ENST00000437737 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
LINC01088-201ENST00000437737 CUL7Q14999 1698 aa25.01■■□□□ 1.59
LINC01088-201ENST00000437737 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
LINC01088-201ENST00000437737 PTPRGP23470 1445 aa24.94■■□□□ 1.58
LINC01088-201ENST00000437737 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
LINC01088-201ENST00000437737 IGF1RP08069 1367 aa24.93■■□□□ 1.58
LINC01088-201ENST00000437737 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
LINC01088-201ENST00000437737 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
LINC01088-201ENST00000437737 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
LINC01088-201ENST00000437737 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
LINC01088-201ENST00000437737 ASXL2Q76L83 1435 aa24.84■■□□□ 1.57
LINC01088-201ENST00000437737 ILDR1Q86SU0 546 aaPredicted RBP24.83■■□□□ 1.57
LINC01088-201ENST00000437737 GLI2P10070 1586 aa24.83■■□□□ 1.57
LINC01088-201ENST00000437737 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.56
LINC01088-201ENST00000437737 ADGRL1O94910 1474 aa24.8■■□□□ 1.56
LINC01088-201ENST00000437737 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
LINC01088-201ENST00000437737 IQGAP2Q13576 1575 aa24.79■■□□□ 1.56
LINC01088-201ENST00000437737 UHRF1BP1LA0JNW5 1464 aa24.75■■□□□ 1.55
LINC01088-201ENST00000437737 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
LINC01088-201ENST00000437737 MAP3K4Q9Y6R4 1608 aa24.7■■□□□ 1.54
LINC01088-201ENST00000437737 EPRSP07814 1512 aaKnown RBP24.68■■□□□ 1.54
LINC01088-201ENST00000437737 TEX14Q8IWB6 1497 aa24.67■■□□□ 1.54
LINC01088-201ENST00000437737 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
LINC01088-201ENST00000437737 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
LINC01088-201ENST00000437737 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
LINC01088-201ENST00000437737 KDM5BQ9UGL1 1544 aa24.65■■□□□ 1.54
LINC01088-201ENST00000437737 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
LINC01088-201ENST00000437737 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
LINC01088-201ENST00000437737 UGGT2Q9NYU1 1516 aa24.57■■□□□ 1.52
LINC01088-201ENST00000437737 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
LINC01088-201ENST00000437737 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
LINC01088-201ENST00000437737 CFAP43Q8NDM7 1665 aa24.46■■□□□ 1.51
LINC01088-201ENST00000437737 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
LINC01088-201ENST00000437737 CD109Q6YHK3 1445 aa24.42■■□□□ 1.5
LINC01088-201ENST00000437737 MAGI3Q5TCQ9 1506 aa24.41■■□□□ 1.5
LINC01088-201ENST00000437737 KCNH8Q96L42 1107 aa24.4■■□□□ 1.5
LINC01088-201ENST00000437737 KIF21BO75037 1637 aa24.38■■□□□ 1.49
LINC01088-201ENST00000437737 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
LINC01088-201ENST00000437737 ABCA8O94911 1581 aa24.35■■□□□ 1.49
LINC01088-201ENST00000437737 ARAP3Q8WWN8 1544 aa24.23■■□□□ 1.47
LINC01088-201ENST00000437737 ARID3CA6NKF2 412 aa24.2■■□□□ 1.46
LINC01088-201ENST00000437737 FBXO41Q8TF61 875 aa24.2■■□□□ 1.46
LINC01088-201ENST00000437737 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
LINC01088-201ENST00000437737 ADAMTSL3P82987 1691 aa24.16■■□□□ 1.46
LINC01088-201ENST00000437737 PTPRMP28827 1452 aa24.16■■□□□ 1.46
LINC01088-201ENST00000437737 ABCA9Q8IUA7 1624 aa24.15■■□□□ 1.46
LINC01088-201ENST00000437737 ATP10BO94823 1461 aa24.13■■□□□ 1.45
LINC01088-201ENST00000437737 PHLDB1Q86UU1 1377 aa24.12■■□□□ 1.45
LINC01088-201ENST00000437737 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
LINC01088-201ENST00000437737 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
LINC01088-201ENST00000437737 BCORL1Q5H9F3 1711 aa24.08■■□□□ 1.45
LINC01088-201ENST00000437737 RAPGEF3O95398 923 aa24.08■■□□□ 1.45
LINC01088-201ENST00000437737 MADDQ8WXG6 1647 aa24.06■■□□□ 1.44
LINC01088-201ENST00000437737 ARID4BQ4LE39 1312 aaPredicted RBP24.06■■□□□ 1.44
LINC01088-201ENST00000437737 NEO1Q92859 1461 aa24.06■■□□□ 1.44
LINC01088-201ENST00000437737 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
LINC01088-201ENST00000437737 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
LINC01088-201ENST00000437737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
LINC01088-201ENST00000437737 HNRNPUL2Q1KMD3 747 aaKnown RBP24.03■■□□□ 1.44
LINC01088-201ENST00000437737 FRMPD1Q5SYB0 1578 aa24.03■■□□□ 1.44
LINC01088-201ENST00000437737 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
LINC01088-201ENST00000437737 RIMS1Q86UR5 1692 aaKnown RBP23.99■■□□□ 1.43
LINC01088-201ENST00000437737 LMTK3Q96Q04 1460 aa23.98■■□□□ 1.43
LINC01088-201ENST00000437737 ARHGEF40Q8TER5 1519 aa23.94■■□□□ 1.42
LINC01088-201ENST00000437737 RICTORQ6R327 1708 aa23.91■■□□□ 1.42
LINC01088-201ENST00000437737 DENND4BO75064 1496 aaPredicted RBP23.9■■□□□ 1.42
LINC01088-201ENST00000437737 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
LINC01088-201ENST00000437737 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
LINC01088-201ENST00000437737 CFAP74Q9C0B2 1584 aa23.87■■□□□ 1.41
LINC01088-201ENST00000437737 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
LINC01088-201ENST00000437737 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
LINC01088-201ENST00000437737 FANCAO15360 1455 aa23.84■■□□□ 1.41
LINC01088-201ENST00000437737 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
LINC01088-201ENST00000437737 HSPA2P54652 639 aa23.84■■□□□ 1.41
LINC01088-201ENST00000437737 PLEKHD1A6NEE1 506 aa23.83■■□□□ 1.41
LINC01088-201ENST00000437737 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
LINC01088-201ENST00000437737 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
LINC01088-201ENST00000437737 ZFYVE16Q7Z3T8 1539 aa23.8■■□□□ 1.4
LINC01088-201ENST00000437737 EFCAB5A4FU69 1503 aa23.79■■□□□ 1.4
LINC01088-201ENST00000437737 ZMYM4Q5VZL5 1548 aa23.79■■□□□ 1.4
LINC01088-201ENST00000437737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
LINC01088-201ENST00000437737 SIGLEC1Q9BZZ2 1709 aa23.79■■□□□ 1.4
LINC01088-201ENST00000437737 FER1L4A9Z1Z3 1794 aa23.78■■□□□ 1.4
LINC01088-201ENST00000437737 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
LINC01088-201ENST00000437737 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
LINC01088-201ENST00000437737 MLECQ14165 292 aa23.75■■□□□ 1.39
LINC01088-201ENST00000437737 CERKQ8TCT0 537 aa23.73■■□□□ 1.39
LINC01088-201ENST00000437737 MAGI2Q86UL8 1455 aa23.72■■□□□ 1.39
LINC01088-201ENST00000437737 HECW1Q76N89 1606 aa23.72■■□□□ 1.39
LINC01088-201ENST00000437737 SCAPERQ9BY12 1400 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 616.5 ms