RNA–Protein interactions for RNA: ENST00000437259.5

NSMF-208, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NSMF, Length 3,577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-208ENST00000437259 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
NSMF-208ENST00000437259 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
NSMF-208ENST00000437259 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
NSMF-208ENST00000437259 BCANQ96GW7 911 aa23.25■■□□□ 1.31
NSMF-208ENST00000437259 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
NSMF-208ENST00000437259 PHLDB1Q86UU1 1377 aa23.23■■□□□ 1.31
NSMF-208ENST00000437259 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
NSMF-208ENST00000437259 NESP48681 1621 aa23.17■■□□□ 1.3
NSMF-208ENST00000437259 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
NSMF-208ENST00000437259 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
NSMF-208ENST00000437259 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
NSMF-208ENST00000437259 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
NSMF-208ENST00000437259 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
NSMF-208ENST00000437259 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
NSMF-208ENST00000437259 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
NSMF-208ENST00000437259 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
NSMF-208ENST00000437259 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.28
NSMF-208ENST00000437259 SUPT16HQ9Y5B9 1047 aaKnown RBP23.07■■□□□ 1.28
NSMF-208ENST00000437259 RRP7BPQ9NSQ0 103 aa23.06■■□□□ 1.28
NSMF-208ENST00000437259 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
NSMF-208ENST00000437259 CNGB1Q14028 1251 aaPredicted RBP23.02■■□□□ 1.28
NSMF-208ENST00000437259 TONSLQ96HA7 1378 aa23■■□□□ 1.27
NSMF-208ENST00000437259 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
NSMF-208ENST00000437259 ANP32CO43423 234 aa22.96■■□□□ 1.27
NSMF-208ENST00000437259 PCF11O94913 1555 aaKnown RBP22.95■■□□□ 1.26
NSMF-208ENST00000437259 FKBP8Q14318 412 aa22.95■■□□□ 1.26
NSMF-208ENST00000437259 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
NSMF-208ENST00000437259 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
NSMF-208ENST00000437259 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
NSMF-208ENST00000437259 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
NSMF-208ENST00000437259 NEFLP07196 543 aa22.87■■□□□ 1.25
NSMF-208ENST00000437259 FOXD1Q16676 465 aa22.87■■□□□ 1.25
NSMF-208ENST00000437259 POLR3GLQ9BT43 218 aa22.83■■□□□ 1.24
NSMF-208ENST00000437259 FMN1Q68DA7 1419 aa22.82■■□□□ 1.24
NSMF-208ENST00000437259 FBLN2P98095 1184 aa22.81■■□□□ 1.24
NSMF-208ENST00000437259 FGD6Q6ZV73 1430 aa22.8■■□□□ 1.24
NSMF-208ENST00000437259 CASKIN1Q8WXD9 1431 aa22.8■■□□□ 1.24
NSMF-208ENST00000437259 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
NSMF-208ENST00000437259 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
NSMF-208ENST00000437259 PRDM2Q13029 1718 aa22.76■■□□□ 1.23
NSMF-208ENST00000437259 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
NSMF-208ENST00000437259 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
NSMF-208ENST00000437259 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
NSMF-208ENST00000437259 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
NSMF-208ENST00000437259 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
NSMF-208ENST00000437259 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
NSMF-208ENST00000437259 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
NSMF-208ENST00000437259 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
NSMF-208ENST00000437259 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
NSMF-208ENST00000437259 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
NSMF-208ENST00000437259 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
NSMF-208ENST00000437259 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
NSMF-208ENST00000437259 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
NSMF-208ENST00000437259 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.224e-9■■■■■ 45.8
NSMF-208ENST00000437259 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
NSMF-208ENST00000437259 PDS5BQ9NTI5 1447 aa22.67■■□□□ 1.22
NSMF-208ENST00000437259 TSHZ2Q9NRE2 1034 aa22.66■■□□□ 1.22
NSMF-208ENST00000437259 HSPA5P11021 654 aaKnown RBP22.64■■□□□ 1.21
NSMF-208ENST00000437259 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
NSMF-208ENST00000437259 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
NSMF-208ENST00000437259 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
NSMF-208ENST00000437259 CFAP43Q8NDM7 1665 aa22.61■■□□□ 1.21
NSMF-208ENST00000437259 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
NSMF-208ENST00000437259 MPHOSPH9Q99550 1183 aa22.59■■□□□ 1.21
NSMF-208ENST00000437259 UACAQ9BZF9 1416 aa22.58■■□□□ 1.2
NSMF-208ENST00000437259 NAIPQ13075 1403 aa22.57■■□□□ 1.2
NSMF-208ENST00000437259 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
NSMF-208ENST00000437259 SLC4A1APQ9BWU0 796 aaKnown RBP22.57■■□□□ 1.2
NSMF-208ENST00000437259 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
NSMF-208ENST00000437259 CUL7Q14999 1698 aa22.55■■□□□ 1.2
NSMF-208ENST00000437259 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
NSMF-208ENST00000437259 HFM1A2PYH4 1435 aa22.55■■□□□ 1.2
NSMF-208ENST00000437259 CTTNBP2Q8WZ74 1663 aa22.53■■□□□ 1.2
NSMF-208ENST00000437259 CCER2I3L3R5 266 aa22.53■■□□□ 1.2
NSMF-208ENST00000437259 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
NSMF-208ENST00000437259 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
NSMF-208ENST00000437259 WASHC2AQ641Q2 1341 aa22.48■■□□□ 1.19
NSMF-208ENST00000437259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.47■■□□□ 1.195e-8■■■■□ 19.6
NSMF-208ENST00000437259 PTPN23Q9H3S7 1636 aa22.46■■□□□ 1.19
NSMF-208ENST00000437259 CCDC184Q52MB2 194 aa22.45■■□□□ 1.19
NSMF-208ENST00000437259 MRS2Q9HD23 443 aa22.45■■□□□ 1.19
NSMF-208ENST00000437259 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
NSMF-208ENST00000437259 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
NSMF-208ENST00000437259 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
NSMF-208ENST00000437259 CFDP1Q9UEE9 299 aaPredicted RBP22.44■■□□□ 1.18
NSMF-208ENST00000437259 SUPT6HQ7KZ85 1726 aaKnown RBP22.41■■□□□ 1.18
NSMF-208ENST00000437259 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
NSMF-208ENST00000437259 MAGI3Q5TCQ9 1506 aa22.4■■□□□ 1.18
NSMF-208ENST00000437259 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
NSMF-208ENST00000437259 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
NSMF-208ENST00000437259 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
NSMF-208ENST00000437259 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
NSMF-208ENST00000437259 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
NSMF-208ENST00000437259 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
NSMF-208ENST00000437259 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
NSMF-208ENST00000437259 LRRIQ1Q96JM4 1722 aa22.33■■□□□ 1.17
NSMF-208ENST00000437259 RBM19Q9Y4C8 960 aaKnown RBP22.31■■□□□ 1.16
NSMF-208ENST00000437259 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
NSMF-208ENST00000437259 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
NSMF-208ENST00000437259 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms