RNA–Protein interactions for RNA: ENST00000436321.5

MDH1-206, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-206ENST00000436321 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
MDH1-206ENST00000436321 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
MDH1-206ENST00000436321 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
MDH1-206ENST00000436321 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
MDH1-206ENST00000436321 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
MDH1-206ENST00000436321 HMGXB3Q12766 1538 aa11.83□□□□□ -0.52
MDH1-206ENST00000436321 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
MDH1-206ENST00000436321 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
MDH1-206ENST00000436321 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
MDH1-206ENST00000436321 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
MDH1-206ENST00000436321 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
MDH1-206ENST00000436321 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
MDH1-206ENST00000436321 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
MDH1-206ENST00000436321 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
MDH1-206ENST00000436321 NBR1Q14596 966 aa11.7□□□□□ -0.54
MDH1-206ENST00000436321 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
MDH1-206ENST00000436321 EEA1Q15075 1411 aa11.64□□□□□ -0.55
MDH1-206ENST00000436321 RGL2O15211 777 aa11.64□□□□□ -0.55
MDH1-206ENST00000436321 CFTRP13569 1480 aa11.62□□□□□ -0.55
MDH1-206ENST00000436321 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
MDH1-206ENST00000436321 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
MDH1-206ENST00000436321 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
MDH1-206ENST00000436321 SOGA1O94964 1423 aa11.6□□□□□ -0.55
MDH1-206ENST00000436321 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
MDH1-206ENST00000436321 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
MDH1-206ENST00000436321 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
MDH1-206ENST00000436321 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
MDH1-206ENST00000436321 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
MDH1-206ENST00000436321 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
MDH1-206ENST00000436321 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
MDH1-206ENST00000436321 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
MDH1-206ENST00000436321 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
MDH1-206ENST00000436321 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
MDH1-206ENST00000436321 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
MDH1-206ENST00000436321 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
MDH1-206ENST00000436321 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
MDH1-206ENST00000436321 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
MDH1-206ENST00000436321 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
MDH1-206ENST00000436321 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
MDH1-206ENST00000436321 MIER1Q8N108 512 aa11.5□□□□□ -0.57
MDH1-206ENST00000436321 CUX1P39880 1505 aa11.5□□□□□ -0.57
MDH1-206ENST00000436321 GOLGA3Q08378 1498 aa11.49□□□□□ -0.57
MDH1-206ENST00000436321 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
MDH1-206ENST00000436321 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
MDH1-206ENST00000436321 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
MDH1-206ENST00000436321 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
MDH1-206ENST00000436321 ARXQ96QS3 562 aa11.45□□□□□ -0.58
MDH1-206ENST00000436321 PCGF6Q9BYE7 350 aa11.45□□□□□ -0.58
MDH1-206ENST00000436321 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
MDH1-206ENST00000436321 KIF21BO75037 1637 aa11.44□□□□□ -0.58
MDH1-206ENST00000436321 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
MDH1-206ENST00000436321 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
MDH1-206ENST00000436321 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
MDH1-206ENST00000436321 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
MDH1-206ENST00000436321 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
MDH1-206ENST00000436321 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
MDH1-206ENST00000436321 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
MDH1-206ENST00000436321 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
MDH1-206ENST00000436321 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
MDH1-206ENST00000436321 NESP48681 1621 aa11.38□□□□□ -0.59
MDH1-206ENST00000436321 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
MDH1-206ENST00000436321 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
MDH1-206ENST00000436321 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
MDH1-206ENST00000436321 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
MDH1-206ENST00000436321 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
MDH1-206ENST00000436321 CUX2O14529 1486 aa11.34□□□□□ -0.59
MDH1-206ENST00000436321 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
MDH1-206ENST00000436321 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
MDH1-206ENST00000436321 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
MDH1-206ENST00000436321 TMEM132AQ24JP5 1023 aa11.32□□□□□ -0.6
MDH1-206ENST00000436321 CLIP1P30622 1438 aa11.31□□□□□ -0.6
MDH1-206ENST00000436321 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
MDH1-206ENST00000436321 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.6
MDH1-206ENST00000436321 URB2Q14146 1524 aaKnown RBP11.27□□□□□ -0.61
MDH1-206ENST00000436321 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
MDH1-206ENST00000436321 IGF1RP08069 1367 aa11.26□□□□□ -0.61
MDH1-206ENST00000436321 HRCP23327 699 aa11.25□□□□□ -0.61
MDH1-206ENST00000436321 PPARGC1BQ86YN6 1023 aaKnown RBP11.25□□□□□ -0.61
MDH1-206ENST00000436321 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
MDH1-206ENST00000436321 C14orf37Q86TY3 774 aa11.24□□□□□ -0.61
MDH1-206ENST00000436321 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
MDH1-206ENST00000436321 GSE1Q14687 1217 aa11.23□□□□□ -0.61
MDH1-206ENST00000436321 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
MDH1-206ENST00000436321 HOMEZQ8IX15 550 aa11.22□□□□□ -0.61
MDH1-206ENST00000436321 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
MDH1-206ENST00000436321 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.61
MDH1-206ENST00000436321 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
MDH1-206ENST00000436321 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
MDH1-206ENST00000436321 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
MDH1-206ENST00000436321 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
MDH1-206ENST00000436321 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
MDH1-206ENST00000436321 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
MDH1-206ENST00000436321 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
MDH1-206ENST00000436321 WDR97A6NE52 1622 aa11.16□□□□□ -0.62
MDH1-206ENST00000436321 CUL7Q14999 1698 aa11.15□□□□□ -0.62
MDH1-206ENST00000436321 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
MDH1-206ENST00000436321 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
MDH1-206ENST00000436321 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
MDH1-206ENST00000436321 TDRD9Q8NDG6 1382 aaKnown RBP11.14□□□□□ -0.63
MDH1-206ENST00000436321 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms