RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
AC007879.1-201ENST00000435643 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
AC007879.1-201ENST00000435643 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
AC007879.1-201ENST00000435643 LHX8Q68G74 356 aa14.74□□□□□ -0.05
AC007879.1-201ENST00000435643 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
AC007879.1-201ENST00000435643 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
AC007879.1-201ENST00000435643 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
AC007879.1-201ENST00000435643 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
AC007879.1-201ENST00000435643 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
AC007879.1-201ENST00000435643 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
AC007879.1-201ENST00000435643 WIZO95785 1651 aa14.65□□□□□ -0.06
AC007879.1-201ENST00000435643 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
AC007879.1-201ENST00000435643 PROM2Q8N271 834 aa14.61□□□□□ -0.07
AC007879.1-201ENST00000435643 DCBLD2Q96PD2 775 aa14.6□□□□□ -0.07
AC007879.1-201ENST00000435643 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
AC007879.1-201ENST00000435643 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC007879.1-201ENST00000435643 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
AC007879.1-201ENST00000435643 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
AC007879.1-201ENST00000435643 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
AC007879.1-201ENST00000435643 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
AC007879.1-201ENST00000435643 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
AC007879.1-201ENST00000435643 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
AC007879.1-201ENST00000435643 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
AC007879.1-201ENST00000435643 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
AC007879.1-201ENST00000435643 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
AC007879.1-201ENST00000435643 NESP48681 1621 aa14.28□□□□□ -0.12
AC007879.1-201ENST00000435643 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
AC007879.1-201ENST00000435643 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
AC007879.1-201ENST00000435643 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
AC007879.1-201ENST00000435643 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
AC007879.1-201ENST00000435643 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
AC007879.1-201ENST00000435643 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
AC007879.1-201ENST00000435643 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
AC007879.1-201ENST00000435643 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
AC007879.1-201ENST00000435643 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
AC007879.1-201ENST00000435643 MIER1Q8N108 512 aa14.22□□□□□ -0.13
AC007879.1-201ENST00000435643 CFTRP13569 1480 aa14.19□□□□□ -0.14
AC007879.1-201ENST00000435643 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
AC007879.1-201ENST00000435643 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
AC007879.1-201ENST00000435643 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
AC007879.1-201ENST00000435643 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
AC007879.1-201ENST00000435643 C7P10643 843 aa14.14□□□□□ -0.15
AC007879.1-201ENST00000435643 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
AC007879.1-201ENST00000435643 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
AC007879.1-201ENST00000435643 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
AC007879.1-201ENST00000435643 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
AC007879.1-201ENST00000435643 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
AC007879.1-201ENST00000435643 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
AC007879.1-201ENST00000435643 MAP3K13O43283 966 aa14.08□□□□□ -0.16
AC007879.1-201ENST00000435643 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
AC007879.1-201ENST00000435643 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
AC007879.1-201ENST00000435643 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
AC007879.1-201ENST00000435643 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
AC007879.1-201ENST00000435643 FKBP8Q14318 412 aa14.04□□□□□ -0.16
AC007879.1-201ENST00000435643 TIE1P35590 1138 aa14.03□□□□□ -0.16
AC007879.1-201ENST00000435643 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
AC007879.1-201ENST00000435643 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.16
AC007879.1-201ENST00000435643 NUBP1P53384 320 aa14.01□□□□□ -0.17
AC007879.1-201ENST00000435643 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
AC007879.1-201ENST00000435643 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
AC007879.1-201ENST00000435643 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
AC007879.1-201ENST00000435643 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
AC007879.1-201ENST00000435643 POTEFA5A3E0 1075 aa13.96□□□□□ -0.17
AC007879.1-201ENST00000435643 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
AC007879.1-201ENST00000435643 URB2Q14146 1524 aaKnown RBP13.94□□□□□ -0.18
AC007879.1-201ENST00000435643 WDR62O43379 1518 aa13.92□□□□□ -0.18
AC007879.1-201ENST00000435643 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
AC007879.1-201ENST00000435643 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
AC007879.1-201ENST00000435643 CUX2O14529 1486 aa13.88□□□□□ -0.19
AC007879.1-201ENST00000435643 POTEMA6NI47 508 aa13.88□□□□□ -0.19
AC007879.1-201ENST00000435643 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
AC007879.1-201ENST00000435643 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
AC007879.1-201ENST00000435643 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
AC007879.1-201ENST00000435643 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
AC007879.1-201ENST00000435643 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
AC007879.1-201ENST00000435643 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
AC007879.1-201ENST00000435643 CUX1P39880 1505 aa13.85□□□□□ -0.19
AC007879.1-201ENST00000435643 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
AC007879.1-201ENST00000435643 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
AC007879.1-201ENST00000435643 IER5LQ5T953 404 aa13.83□□□□□ -0.2
AC007879.1-201ENST00000435643 PLSCR2Q9NRY7 297 aa13.83□□□□□ -0.2
AC007879.1-201ENST00000435643 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
AC007879.1-201ENST00000435643 SEC24BO95487 1268 aa13.8□□□□□ -0.2
AC007879.1-201ENST00000435643 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
AC007879.1-201ENST00000435643 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
AC007879.1-201ENST00000435643 LCE2DQ5TA82 110 aaPredicted RBP13.78□□□□□ -0.2
AC007879.1-201ENST00000435643 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
AC007879.1-201ENST00000435643 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
AC007879.1-201ENST00000435643 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
AC007879.1-201ENST00000435643 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
AC007879.1-201ENST00000435643 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
AC007879.1-201ENST00000435643 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
AC007879.1-201ENST00000435643 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
AC007879.1-201ENST00000435643 SOGA1O94964 1423 aa13.73□□□□□ -0.21
AC007879.1-201ENST00000435643 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
AC007879.1-201ENST00000435643 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
AC007879.1-201ENST00000435643 PYGBP11216 843 aa13.69□□□□□ -0.22
AC007879.1-201ENST00000435643 FAM163AQ96GL9 167 aaPredicted RBP13.69□□□□□ -0.22
AC007879.1-201ENST00000435643 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
AC007879.1-201ENST00000435643 PCDH10Q9P2E7 1040 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms