RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
CTCFL-209ENST00000433949 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
CTCFL-209ENST00000433949 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
CTCFL-209ENST00000433949 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
CTCFL-209ENST00000433949 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
CTCFL-209ENST00000433949 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.54
CTCFL-209ENST00000433949 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
CTCFL-209ENST00000433949 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
CTCFL-209ENST00000433949 CHD1O14646 1710 aa18.28■□□□□ 0.52
CTCFL-209ENST00000433949 APLP2Q06481 763 aa18.26■□□□□ 0.51
CTCFL-209ENST00000433949 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
CTCFL-209ENST00000433949 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
CTCFL-209ENST00000433949 CTTNBP2Q8WZ74 1663 aa18.23■□□□□ 0.51
CTCFL-209ENST00000433949 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
CTCFL-209ENST00000433949 NUP160Q12769 1436 aa18.22■□□□□ 0.51
CTCFL-209ENST00000433949 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
CTCFL-209ENST00000433949 JPH4Q96JJ6 628 aa18.21■□□□□ 0.5
CTCFL-209ENST00000433949 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
CTCFL-209ENST00000433949 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
CTCFL-209ENST00000433949 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
CTCFL-209ENST00000433949 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
CTCFL-209ENST00000433949 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
CTCFL-209ENST00000433949 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
CTCFL-209ENST00000433949 PRG4Q92954 1404 aaPredicted RBP18.08■□□□□ 0.49
CTCFL-209ENST00000433949 UGGT2Q9NYU1 1516 aa18.07■□□□□ 0.48
CTCFL-209ENST00000433949 DISP1Q96F81 1524 aa18.07■□□□□ 0.48
CTCFL-209ENST00000433949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
CTCFL-209ENST00000433949 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
CTCFL-209ENST00000433949 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
CTCFL-209ENST00000433949 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
CTCFL-209ENST00000433949 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
CTCFL-209ENST00000433949 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
CTCFL-209ENST00000433949 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
CTCFL-209ENST00000433949 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
CTCFL-209ENST00000433949 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
CTCFL-209ENST00000433949 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
CTCFL-209ENST00000433949 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
CTCFL-209ENST00000433949 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
CTCFL-209ENST00000433949 PTPRGP23470 1445 aa17.94■□□□□ 0.46
CTCFL-209ENST00000433949 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
CTCFL-209ENST00000433949 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
CTCFL-209ENST00000433949 CFAP43Q8NDM7 1665 aa17.91■□□□□ 0.46
CTCFL-209ENST00000433949 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
CTCFL-209ENST00000433949 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
CTCFL-209ENST00000433949 PLB1Q6P1J6 1458 aa17.91■□□□□ 0.46
CTCFL-209ENST00000433949 CASKIN1Q8WXD9 1431 aa17.88■□□□□ 0.45
CTCFL-209ENST00000433949 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
CTCFL-209ENST00000433949 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
CTCFL-209ENST00000433949 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.44
CTCFL-209ENST00000433949 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
CTCFL-209ENST00000433949 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
CTCFL-209ENST00000433949 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
CTCFL-209ENST00000433949 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
CTCFL-209ENST00000433949 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
CTCFL-209ENST00000433949 UACAQ9BZF9 1416 aa17.79■□□□□ 0.44
CTCFL-209ENST00000433949 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
CTCFL-209ENST00000433949 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.44
CTCFL-209ENST00000433949 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
CTCFL-209ENST00000433949 LRRIQ1Q96JM4 1722 aa17.76■□□□□ 0.43
CTCFL-209ENST00000433949 ABCA8O94911 1581 aa17.75■□□□□ 0.43
CTCFL-209ENST00000433949 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
CTCFL-209ENST00000433949 ATP10BO94823 1461 aa17.71■□□□□ 0.43
CTCFL-209ENST00000433949 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
CTCFL-209ENST00000433949 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
CTCFL-209ENST00000433949 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
CTCFL-209ENST00000433949 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
CTCFL-209ENST00000433949 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
CTCFL-209ENST00000433949 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
CTCFL-209ENST00000433949 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
CTCFL-209ENST00000433949 PHLDB1Q86UU1 1377 aa17.68■□□□□ 0.42
CTCFL-209ENST00000433949 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
CTCFL-209ENST00000433949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTCFL-209ENST00000433949 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
CTCFL-209ENST00000433949 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTCFL-209ENST00000433949 ADCY10Q96PN6 1610 aa17.65■□□□□ 0.42
CTCFL-209ENST00000433949 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
CTCFL-209ENST00000433949 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
CTCFL-209ENST00000433949 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
CTCFL-209ENST00000433949 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
CTCFL-209ENST00000433949 KDM5BQ9UGL1 1544 aa17.59■□□□□ 0.41
CTCFL-209ENST00000433949 ZCCHC11Q5TAX3 1644 aaKnown RBP17.58■□□□□ 0.4
CTCFL-209ENST00000433949 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.4
CTCFL-209ENST00000433949 NCOA2Q15596 1464 aa17.57■□□□□ 0.4
CTCFL-209ENST00000433949 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
CTCFL-209ENST00000433949 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
CTCFL-209ENST00000433949 FGD6Q6ZV73 1430 aa17.56■□□□□ 0.4
CTCFL-209ENST00000433949 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
CTCFL-209ENST00000433949 ITGAEP38570 1179 aa17.55■□□□□ 0.4
CTCFL-209ENST00000433949 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
CTCFL-209ENST00000433949 RAB3GAP2Q9H2M9 1393 aa17.54■□□□□ 0.4
CTCFL-209ENST00000433949 KIF14Q15058 1648 aa17.52■□□□□ 0.4
CTCFL-209ENST00000433949 ASXL2Q76L83 1435 aa17.52■□□□□ 0.4
CTCFL-209ENST00000433949 MYOM3Q5VTT5 1437 aa17.51■□□□□ 0.39
CTCFL-209ENST00000433949 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
CTCFL-209ENST00000433949 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
CTCFL-209ENST00000433949 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
CTCFL-209ENST00000433949 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
CTCFL-209ENST00000433949 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
CTCFL-209ENST00000433949 PTPN23Q9H3S7 1636 aa17.44■□□□□ 0.38
CTCFL-209ENST00000433949 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms