RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
MCF2L-215ENST00000433807 RIMBP3Q9UFD9 1639 aa21.7■■□□□ 1.06
MCF2L-215ENST00000433807 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
MCF2L-215ENST00000433807 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
MCF2L-215ENST00000433807 KIF21BO75037 1637 aa21.65■■□□□ 1.06
MCF2L-215ENST00000433807 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
MCF2L-215ENST00000433807 JPH4Q96JJ6 628 aa21.63■■□□□ 1.05
MCF2L-215ENST00000433807 IQGAP2Q13576 1575 aa21.61■■□□□ 1.05
MCF2L-215ENST00000433807 PRG4Q92954 1404 aaPredicted RBP21.56■■□□□ 1.04
MCF2L-215ENST00000433807 ERCC6L2Q5T890 1561 aa21.56■■□□□ 1.04
MCF2L-215ENST00000433807 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
MCF2L-215ENST00000433807 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
MCF2L-215ENST00000433807 UGGT2Q9NYU1 1516 aa21.5■■□□□ 1.03
MCF2L-215ENST00000433807 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
MCF2L-215ENST00000433807 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
MCF2L-215ENST00000433807 DISP1Q96F81 1524 aa21.44■■□□□ 1.02
MCF2L-215ENST00000433807 KIAA0556O60303 1618 aa21.41■■□□□ 1.02
MCF2L-215ENST00000433807 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
MCF2L-215ENST00000433807 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
MCF2L-215ENST00000433807 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
MCF2L-215ENST00000433807 PTPRGP23470 1445 aa21.34■■□□□ 1.01
MCF2L-215ENST00000433807 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
MCF2L-215ENST00000433807 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
MCF2L-215ENST00000433807 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
MCF2L-215ENST00000433807 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■□□□□ 0.99
MCF2L-215ENST00000433807 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
MCF2L-215ENST00000433807 ADCY10Q96PN6 1610 aa21.24■□□□□ 0.99
MCF2L-215ENST00000433807 UACAQ9BZF9 1416 aa21.21■□□□□ 0.99
MCF2L-215ENST00000433807 FHOD3Q2V2M9 1422 aa21.2■□□□□ 0.98
MCF2L-215ENST00000433807 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
MCF2L-215ENST00000433807 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
MCF2L-215ENST00000433807 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
MCF2L-215ENST00000433807 ABCA8O94911 1581 aa21.16■□□□□ 0.98
MCF2L-215ENST00000433807 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
MCF2L-215ENST00000433807 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
MCF2L-215ENST00000433807 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
MCF2L-215ENST00000433807 CLIP1P30622 1438 aa21.12■□□□□ 0.97
MCF2L-215ENST00000433807 RAPGEF6Q8TEU7 1601 aa21.1■□□□□ 0.97
MCF2L-215ENST00000433807 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
MCF2L-215ENST00000433807 FMN1Q68DA7 1419 aa21.07■□□□□ 0.96
MCF2L-215ENST00000433807 MAPKBP1O60336 1514 aa21.07■□□□□ 0.96
MCF2L-215ENST00000433807 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
MCF2L-215ENST00000433807 ZCCHC11Q5TAX3 1644 aaKnown RBP21.06■□□□□ 0.96
MCF2L-215ENST00000433807 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
MCF2L-215ENST00000433807 ASXL2Q76L83 1435 aa20.97■□□□□ 0.95
MCF2L-215ENST00000433807 ATP10BO94823 1461 aa20.97■□□□□ 0.95
MCF2L-215ENST00000433807 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-215ENST00000433807 HECW1Q76N89 1606 aa20.96■□□□□ 0.95
MCF2L-215ENST00000433807 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
MCF2L-215ENST00000433807 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
MCF2L-215ENST00000433807 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
MCF2L-215ENST00000433807 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
MCF2L-215ENST00000433807 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
MCF2L-215ENST00000433807 DIP2BQ9P265 1576 aa20.92■□□□□ 0.94
MCF2L-215ENST00000433807 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
MCF2L-215ENST00000433807 FYCO1Q9BQS8 1478 aa20.89■□□□□ 0.94
MCF2L-215ENST00000433807 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-215ENST00000433807 EPRSP07814 1512 aaKnown RBP20.88■□□□□ 0.93
MCF2L-215ENST00000433807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-215ENST00000433807 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
MCF2L-215ENST00000433807 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
MCF2L-215ENST00000433807 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
MCF2L-215ENST00000433807 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
MCF2L-215ENST00000433807 GLI2P10070 1586 aa20.85■□□□□ 0.93
MCF2L-215ENST00000433807 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.93
MCF2L-215ENST00000433807 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
MCF2L-215ENST00000433807 VPS8Q8N3P4 1428 aa20.81■□□□□ 0.92
MCF2L-215ENST00000433807 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
MCF2L-215ENST00000433807 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-215ENST00000433807 TSPOAP1O95153 1857 aa20.78■□□□□ 0.92
MCF2L-215ENST00000433807 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
MCF2L-215ENST00000433807 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
MCF2L-215ENST00000433807 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-215ENST00000433807 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
MCF2L-215ENST00000433807 PPRC1Q5VV67 1664 aaKnown RBP20.71■□□□□ 0.91
MCF2L-215ENST00000433807 CD109Q6YHK3 1445 aa20.69■□□□□ 0.9
MCF2L-215ENST00000433807 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
MCF2L-215ENST00000433807 KIF14Q15058 1648 aa20.67■□□□□ 0.9
MCF2L-215ENST00000433807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.9
MCF2L-215ENST00000433807 TIAM1Q13009 1591 aa20.65■□□□□ 0.9
MCF2L-215ENST00000433807 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
MCF2L-215ENST00000433807 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
MCF2L-215ENST00000433807 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
MCF2L-215ENST00000433807 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
MCF2L-215ENST00000433807 EHBP1L1Q8N3D4 1523 aa20.61■□□□□ 0.89
MCF2L-215ENST00000433807 MYO5CQ9NQX4 1742 aa20.59■□□□□ 0.89
MCF2L-215ENST00000433807 APLP2Q06481 763 aa20.56■□□□□ 0.88
MCF2L-215ENST00000433807 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
MCF2L-215ENST00000433807 PLCH2O75038 1416 aa20.54■□□□□ 0.88
MCF2L-215ENST00000433807 ARAP3Q8WWN8 1544 aa20.54■□□□□ 0.88
MCF2L-215ENST00000433807 KDM6BO15054 1643 aa20.53■□□□□ 0.88
MCF2L-215ENST00000433807 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
MCF2L-215ENST00000433807 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
MCF2L-215ENST00000433807 NEO1Q92859 1461 aa20.53■□□□□ 0.88
MCF2L-215ENST00000433807 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
MCF2L-215ENST00000433807 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
MCF2L-215ENST00000433807 CDC42BPBQ9Y5S2 1711 aa20.51■□□□□ 0.87
MCF2L-215ENST00000433807 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
MCF2L-215ENST00000433807 FANCAO15360 1455 aa20.5■□□□□ 0.87
MCF2L-215ENST00000433807 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 868.3 ms