RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ITSN2Q9NZM3 1697 aa5.38□□□□□ -1.55
SHPRH-205ENST00000433355 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
SHPRH-205ENST00000433355 FANCD2Q9BXW9 1451 aa5.37□□□□□ -1.55
SHPRH-205ENST00000433355 MIA2Q96PC5 1412 aa5.37□□□□□ -1.55
SHPRH-205ENST00000433355 FGD5Q6ZNL6 1462 aa5.37□□□□□ -1.55
SHPRH-205ENST00000433355 TIAM1Q13009 1591 aa5.37□□□□□ -1.55
SHPRH-205ENST00000433355 STAC3Q96MF2 364 aa5.36□□□□□ -1.55
SHPRH-205ENST00000433355 PLEKHH2Q8IVE3 1493 aa5.36□□□□□ -1.55
SHPRH-205ENST00000433355 NESP48681 1621 aa5.36□□□□□ -1.55
SHPRH-205ENST00000433355 SCAPERQ9BY12 1400 aa5.36□□□□□ -1.55
SHPRH-205ENST00000433355 RRBP1Q9P2E9 1410 aaKnown RBP5.36□□□□□ -1.55
SHPRH-205ENST00000433355 MYT1LQ9UL68 1186 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 CCNB3Q8WWL7 1395 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 MRC2Q9UBG0 1479 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 CARMIL1Q5VZK9 1371 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 GRIN2BQ13224 1484 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 RSPH4AQ5TD94 716 aa5.35□□□□□ -1.55
SHPRH-205ENST00000433355 KTN1Q86UP2 1357 aaKnown RBP5.34□□□□□ -1.56
SHPRH-205ENST00000433355 TTBK1Q5TCY1 1321 aaPredicted RBP5.34□□□□□ -1.56
SHPRH-205ENST00000433355 IQGAP2Q13576 1575 aa5.34□□□□□ -1.56
SHPRH-205ENST00000433355 TOPBP1Q92547 1522 aa5.33□□□□□ -1.56
SHPRH-205ENST00000433355 ABCA5Q8WWZ7 1642 aa5.33□□□□□ -1.56
SHPRH-205ENST00000433355 MTUS2Q5JR59 1369 aa5.33□□□□□ -1.56
SHPRH-205ENST00000433355 ROCK2O75116 1388 aaKnown RBP5.32□□□□□ -1.56
SHPRH-205ENST00000433355 NEFLP07196 543 aa5.32□□□□□ -1.56
SHPRH-205ENST00000433355 GAPVD1Q14C86 1478 aa5.31□□□□□ -1.56
SHPRH-205ENST00000433355 MYOM3Q5VTT5 1437 aa5.31□□□□□ -1.56
SHPRH-205ENST00000433355 SHANK2Q9UPX8 1470 aa5.31□□□□□ -1.56
SHPRH-205ENST00000433355 ERICH6BQ5W0A0 696 aa5.31□□□□□ -1.56
SHPRH-205ENST00000433355 SAMD9Q5K651 1589 aa5.3□□□□□ -1.56
SHPRH-205ENST00000433355 WDR62O43379 1518 aa5.3□□□□□ -1.56
SHPRH-205ENST00000433355 POLA1P09884 1462 aaPredicted RBP5.3□□□□□ -1.56
SHPRH-205ENST00000433355 TEX14Q8IWB6 1497 aa5.3□□□□□ -1.56
SHPRH-205ENST00000433355 KIAA0586Q9BVV6 1533 aa5.3□□□□□ -1.56
SHPRH-205ENST00000433355 HFM1A2PYH4 1435 aa5.3□□□□□ -1.56
SHPRH-205ENST00000433355 ROCK1Q13464 1354 aa5.29□□□□□ -1.56
SHPRH-205ENST00000433355 SOGA1O94964 1423 aa5.28□□□□□ -1.56
SHPRH-205ENST00000433355 ARHGEF12Q9NZN5 1544 aa5.28□□□□□ -1.56
SHPRH-205ENST00000433355 EIF5BO60841 1220 aaKnown RBP5.27□□□□□ -1.57
SHPRH-205ENST00000433355 WDR7Q9Y4E6 1490 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 PBRM1Q86U86 1689 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 ERICH6Q7L0X2 663 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 ADAMTS12P58397 1594 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 GCC2Q8IWJ2 1684 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 SETD5Q9C0A6 1442 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 LRRC9Q6ZRR7 1453 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 FAM135AQ9P2D6 1515 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 ARAP3Q8WWN8 1544 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 UGGT2Q9NYU1 1516 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 TONSLQ96HA7 1378 aa5.27□□□□□ -1.57
SHPRH-205ENST00000433355 NGEFQ8N5V2 710 aa5.26□□□□□ -1.57
SHPRH-205ENST00000433355 UACAQ9BZF9 1416 aa5.26□□□□□ -1.57
SHPRH-205ENST00000433355 FGD6Q6ZV73 1430 aa5.25□□□□□ -1.57
SHPRH-205ENST00000433355 PHLDB1Q86UU1 1377 aa5.25□□□□□ -1.57
SHPRH-205ENST00000433355 ZNF316A6NFI3 1004 aaPredicted RBP5.24□□□□□ -1.57
SHPRH-205ENST00000433355 ZMYM4Q5VZL5 1548 aa5.24□□□□□ -1.57
SHPRH-205ENST00000433355 SYNJ2O15056 1496 aa5.24□□□□□ -1.57
SHPRH-205ENST00000433355 PABPN1Q86U42 306 aaKnown RBP eCLIP5.24□□□□□ -1.57
SHPRH-205ENST00000433355 CCDC141Q6ZP82 1450 aa5.24□□□□□ -1.57
SHPRH-205ENST00000433355 IGF1RP08069 1367 aa5.24□□□□□ -1.57
SHPRH-205ENST00000433355 ADGBQ8N7X0 1667 aa5.24□□□□□ -1.57
SHPRH-205ENST00000433355 CDCA8Q53HL2 280 aa5.23□□□□□ -1.57
SHPRH-205ENST00000433355 KIF14Q15058 1648 aa5.23□□□□□ -1.57
SHPRH-205ENST00000433355 YTHDC1Q96MU7 727 aaKnown RBP5.23□□□□□ -1.57
SHPRH-205ENST00000433355 SNAPC4Q5SXM2 1469 aa5.23□□□□□ -1.57
SHPRH-205ENST00000433355 EIF3AQ14152 1382 aaKnown RBP5.23□□□□□ -1.57
SHPRH-205ENST00000433355 ADCY10Q96PN6 1610 aa5.22□□□□□ -1.57
SHPRH-205ENST00000433355 DIEXFQ68CQ4 756 aaKnown RBP5.22□□□□□ -1.57
SHPRH-205ENST00000433355 ANKRD30AQ9BXX3 1397 aa5.22□□□□□ -1.57
SHPRH-205ENST00000433355 EIF2AK4Q9P2K8 1649 aaKnown RBP5.21□□□□□ -1.57
SHPRH-205ENST00000433355 DAPK1P53355 1430 aa5.21□□□□□ -1.58
SHPRH-205ENST00000433355 CFAP74Q9C0B2 1584 aa5.21□□□□□ -1.58
SHPRH-205ENST00000433355 ARAP1Q96P48 1450 aa5.21□□□□□ -1.58
SHPRH-205ENST00000433355 TCOF1Q13428 1488 aaKnown RBP5.21□□□□□ -1.58
SHPRH-205ENST00000433355 INSRP06213 1382 aa5.2□□□□□ -1.58
SHPRH-205ENST00000433355 WASHC2AQ641Q2 1341 aa5.2□□□□□ -1.58
SHPRH-205ENST00000433355 WASHC2CQ9Y4E1 1318 aa5.2□□□□□ -1.58
SHPRH-205ENST00000433355 CCER2I3L3R5 266 aa5.2□□□□□ -1.58
SHPRH-205ENST00000433355 TARBP1Q13395 1621 aaKnown RBP5.19□□□□□ -1.58
SHPRH-205ENST00000433355 TROQ12816 1431 aaPredicted RBP5.19□□□□□ -1.58
SHPRH-205ENST00000433355 CNTLNQ9NXG0 1405 aa5.19□□□□□ -1.58
SHPRH-205ENST00000433355 ARHGEF5Q12774 1597 aa5.19□□□□□ -1.58
SHPRH-205ENST00000433355 PCF11O94913 1555 aaKnown RBP5.19□□□□□ -1.58
SHPRH-205ENST00000433355 KIAA0556O60303 1618 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 GRIN2AQ12879 1464 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 EPRSP07814 1512 aaKnown RBP5.18□□□□□ -1.58
SHPRH-205ENST00000433355 KANK1Q14678 1352 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 NCOA2Q15596 1464 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 RAPGEF6Q8TEU7 1601 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 NEUROD1Q13562 356 aa5.18□□□□□ -1.58
SHPRH-205ENST00000433355 DNMT1P26358 1616 aaKnown RBP5.18□□□□□ -1.58
SHPRH-205ENST00000433355 AAMPQ13685 434 aa5.17□□□□□ -1.58
SHPRH-205ENST00000433355 NUP160Q12769 1436 aa5.17□□□□□ -1.58
SHPRH-205ENST00000433355 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
SHPRH-205ENST00000433355 PTPN23Q9H3S7 1636 aa5.17□□□□□ -1.58
SHPRH-205ENST00000433355 RAD54L2Q9Y4B4 1467 aa5.17□□□□□ -1.58
SHPRH-205ENST00000433355 ABCC2Q92887 1545 aa5.16□□□□□ -1.58
SHPRH-205ENST00000433355 NEURL4Q96JN8 1562 aa5.16□□□□□ -1.58
SHPRH-205ENST00000433355 ADGRL2O95490 1459 aa5.16□□□□□ -1.58
SHPRH-205ENST00000433355 LOC105371045A0A1W2PR82 267 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms