RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 IGF1RP08069 1367 aa24.29■■□□□ 1.48
SEC13-211ENST00000431352 CUL7Q14999 1698 aa24.29■■□□□ 1.48
SEC13-211ENST00000431352 KIAA0586Q9BVV6 1533 aa24.24■■□□□ 1.47
SEC13-211ENST00000431352 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
SEC13-211ENST00000431352 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
SEC13-211ENST00000431352 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
SEC13-211ENST00000431352 NPM1P06748 294 aaKnown RBP eCLIP24.15■■□□□ 1.46
SEC13-211ENST00000431352 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
SEC13-211ENST00000431352 TTBK1Q5TCY1 1321 aaPredicted RBP24.12■■□□□ 1.45
SEC13-211ENST00000431352 FAM69CQ0P6D2 419 aa24.1■■□□□ 1.45
SEC13-211ENST00000431352 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
SEC13-211ENST00000431352 ABCC10Q5T3U5 1492 aa24.08■■□□□ 1.45
SEC13-211ENST00000431352 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
SEC13-211ENST00000431352 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
SEC13-211ENST00000431352 PTPRGP23470 1445 aa24.04■■□□□ 1.44
SEC13-211ENST00000431352 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
SEC13-211ENST00000431352 TNIKQ9UKE5 1360 aa23.98■■□□□ 1.43
SEC13-211ENST00000431352 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
SEC13-211ENST00000431352 ABCC2Q92887 1545 aa23.91■■□□□ 1.42
SEC13-211ENST00000431352 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
SEC13-211ENST00000431352 TSPOAP1O95153 1857 aa23.91■■□□□ 1.42
SEC13-211ENST00000431352 KDM6BO15054 1643 aa23.87■■□□□ 1.41
SEC13-211ENST00000431352 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
SEC13-211ENST00000431352 ASXL2Q76L83 1435 aa23.85■■□□□ 1.41
SEC13-211ENST00000431352 UACAQ9BZF9 1416 aa23.85■■□□□ 1.41
SEC13-211ENST00000431352 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
SEC13-211ENST00000431352 UHRF1BP1LA0JNW5 1464 aa23.83■■□□□ 1.41
SEC13-211ENST00000431352 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
SEC13-211ENST00000431352 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
SEC13-211ENST00000431352 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
SEC13-211ENST00000431352 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
SEC13-211ENST00000431352 GLI2P10070 1586 aa23.73■■□□□ 1.39
SEC13-211ENST00000431352 PPRC1Q5VV67 1664 aaKnown RBP23.71■■□□□ 1.39
SEC13-211ENST00000431352 EPRSP07814 1512 aaKnown RBP23.69■■□□□ 1.38
SEC13-211ENST00000431352 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
SEC13-211ENST00000431352 GOLGA3Q08378 1498 aa23.67■■□□□ 1.38
SEC13-211ENST00000431352 MAP3K4Q9Y6R4 1608 aa23.63■■□□□ 1.37
SEC13-211ENST00000431352 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
SEC13-211ENST00000431352 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
SEC13-211ENST00000431352 ABCA8O94911 1581 aa23.59■■□□□ 1.37
SEC13-211ENST00000431352 TEX14Q8IWB6 1497 aa23.57■■□□□ 1.36
SEC13-211ENST00000431352 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
SEC13-211ENST00000431352 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
SEC13-211ENST00000431352 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
SEC13-211ENST00000431352 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
SEC13-211ENST00000431352 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
SEC13-211ENST00000431352 ADGRL1O94910 1474 aa23.46■■□□□ 1.35
SEC13-211ENST00000431352 CD109Q6YHK3 1445 aa23.46■■□□□ 1.35
SEC13-211ENST00000431352 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
SEC13-211ENST00000431352 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
SEC13-211ENST00000431352 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
SEC13-211ENST00000431352 SAMD9Q5K651 1589 aa23.42■■□□□ 1.34
SEC13-211ENST00000431352 MAGI3Q5TCQ9 1506 aa23.41■■□□□ 1.34
SEC13-211ENST00000431352 ATP10BO94823 1461 aa23.39■■□□□ 1.34
SEC13-211ENST00000431352 EEA1Q15075 1411 aa23.37■■□□□ 1.33
SEC13-211ENST00000431352 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
SEC13-211ENST00000431352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
SEC13-211ENST00000431352 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
SEC13-211ENST00000431352 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.32
SEC13-211ENST00000431352 ABCA9Q8IUA7 1624 aa23.27■■□□□ 1.32
SEC13-211ENST00000431352 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
SEC13-211ENST00000431352 KIF21BO75037 1637 aa23.23■■□□□ 1.31
SEC13-211ENST00000431352 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
SEC13-211ENST00000431352 ARAP3Q8WWN8 1544 aa23.23■■□□□ 1.31
SEC13-211ENST00000431352 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
SEC13-211ENST00000431352 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
SEC13-211ENST00000431352 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
SEC13-211ENST00000431352 NEO1Q92859 1461 aa23.14■■□□□ 1.29
SEC13-211ENST00000431352 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.29
SEC13-211ENST00000431352 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
SEC13-211ENST00000431352 UBTFP17480 764 aaKnown RBP23.1■■□□□ 1.29
SEC13-211ENST00000431352 FRMPD1Q5SYB0 1578 aa23.1■■□□□ 1.29
SEC13-211ENST00000431352 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
SEC13-211ENST00000431352 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
SEC13-211ENST00000431352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.06■■□□□ 1.284e-7■■■■□ 22.2
SEC13-211ENST00000431352 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
SEC13-211ENST00000431352 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
SEC13-211ENST00000431352 FANCAO15360 1455 aa23.03■■□□□ 1.28
SEC13-211ENST00000431352 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
SEC13-211ENST00000431352 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
SEC13-211ENST00000431352 AKNAQ7Z591 1439 aa23■■□□□ 1.27
SEC13-211ENST00000431352 DENND4BO75064 1496 aaPredicted RBP23■■□□□ 1.27
SEC13-211ENST00000431352 ARHGAP35Q9NRY4 1499 aa22.99■■□□□ 1.27
SEC13-211ENST00000431352 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
SEC13-211ENST00000431352 HECW1Q76N89 1606 aa22.98■■□□□ 1.27
SEC13-211ENST00000431352 ADAMTSL3P82987 1691 aa22.98■■□□□ 1.27
SEC13-211ENST00000431352 RICTORQ6R327 1708 aa22.97■■□□□ 1.27
SEC13-211ENST00000431352 FMN1Q68DA7 1419 aa22.97■■□□□ 1.27
SEC13-211ENST00000431352 PTPRMP28827 1452 aa22.96■■□□□ 1.27
SEC13-211ENST00000431352 BCORL1Q5H9F3 1711 aa22.94■■□□□ 1.26
SEC13-211ENST00000431352 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
SEC13-211ENST00000431352 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
SEC13-211ENST00000431352 ZMYM4Q5VZL5 1548 aa22.89■■□□□ 1.26
SEC13-211ENST00000431352 ZFYVE16Q7Z3T8 1539 aa22.89■■□□□ 1.26
SEC13-211ENST00000431352 PLCH2O75038 1416 aa22.88■■□□□ 1.25
SEC13-211ENST00000431352 YEATS2Q9ULM3 1422 aa22.88■■□□□ 1.25
SEC13-211ENST00000431352 KIF14Q15058 1648 aa22.87■■□□□ 1.25
SEC13-211ENST00000431352 SCAPERQ9BY12 1400 aa22.86■■□□□ 1.25
SEC13-211ENST00000431352 RIMS1Q86UR5 1692 aaKnown RBP22.86■■□□□ 1.25
SEC13-211ENST00000431352 POGZQ7Z3K3 1410 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms