RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
CDK12-201ENST00000430627 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
CDK12-201ENST00000430627 TMX4Q9H1E5 349 aaPredicted RBP18.01■□□□□ 0.47
CDK12-201ENST00000430627 SOX12O15370 315 aa17.95■□□□□ 0.46
CDK12-201ENST00000430627 MSH5O43196 834 aa17.93■□□□□ 0.46
CDK12-201ENST00000430627 MYH16Q9H6N6 1097 aa17.91■□□□□ 0.46
CDK12-201ENST00000430627 POGKQ9P215 609 aa17.9■□□□□ 0.46
CDK12-201ENST00000430627 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDK12-201ENST00000430627 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
CDK12-201ENST00000430627 G3V3G9 751 aa17.87■□□□□ 0.45
CDK12-201ENST00000430627 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
CDK12-201ENST00000430627 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
CDK12-201ENST00000430627 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
CDK12-201ENST00000430627 PRM3Q9NNZ6 103 aa17.85■□□□□ 0.45
CDK12-201ENST00000430627 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
CDK12-201ENST00000430627 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
CDK12-201ENST00000430627 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
CDK12-201ENST00000430627 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
CDK12-201ENST00000430627 ANP32BQ92688 251 aaKnown RBP17.79■□□□□ 0.44
CDK12-201ENST00000430627 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
CDK12-201ENST00000430627 TPRNQ4KMQ1 711 aa17.76■□□□□ 0.43
CDK12-201ENST00000430627 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDK12-201ENST00000430627 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
CDK12-201ENST00000430627 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
CDK12-201ENST00000430627 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
CDK12-201ENST00000430627 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
CDK12-201ENST00000430627 NAP1L2Q9ULW6 460 aaPredicted RBP17.68■□□□□ 0.42
CDK12-201ENST00000430627 FAM9BQ8IZU0 186 aa17.68■□□□□ 0.42
CDK12-201ENST00000430627 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
CDK12-201ENST00000430627 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
CDK12-201ENST00000430627 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
CDK12-201ENST00000430627 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
CDK12-201ENST00000430627 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
CDK12-201ENST00000430627 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
CDK12-201ENST00000430627 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
CDK12-201ENST00000430627 GGT6Q6P531 493 aa17.59■□□□□ 0.41
CDK12-201ENST00000430627 RRP7BPQ9NSQ0 103 aa17.59■□□□□ 0.41
CDK12-201ENST00000430627 PPP1R1BQ9UD71 204 aaPredicted RBP17.58■□□□□ 0.4
CDK12-201ENST00000430627 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.4
CDK12-201ENST00000430627 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
CDK12-201ENST00000430627 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
CDK12-201ENST00000430627 FKBP8Q14318 412 aa17.56■□□□□ 0.4
CDK12-201ENST00000430627 FOXD1Q16676 465 aa17.56■□□□□ 0.4
CDK12-201ENST00000430627 FGD1P98174 961 aa17.54■□□□□ 0.4
CDK12-201ENST00000430627 STK26Q9P289 416 aa17.54■□□□□ 0.4
CDK12-201ENST00000430627 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
CDK12-201ENST00000430627 MAPK8IP3Q9UPT6 1336 aa17.53■□□□□ 0.4
CDK12-201ENST00000430627 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
CDK12-201ENST00000430627 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
CDK12-201ENST00000430627 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.4
CDK12-201ENST00000430627 EVA1CP58658 441 aa17.51■□□□□ 0.39
CDK12-201ENST00000430627 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
CDK12-201ENST00000430627 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
CDK12-201ENST00000430627 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
CDK12-201ENST00000430627 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
CDK12-201ENST00000430627 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
CDK12-201ENST00000430627 NBR1Q14596 966 aa17.46■□□□□ 0.39
CDK12-201ENST00000430627 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
CDK12-201ENST00000430627 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CDK12-201ENST00000430627 KCNJ4P48050 445 aa17.45■□□□□ 0.38
CDK12-201ENST00000430627 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
CDK12-201ENST00000430627 KANK1Q14678 1352 aa17.43■□□□□ 0.38
CDK12-201ENST00000430627 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
CDK12-201ENST00000430627 CASC1Q6TDU7 716 aa17.42■□□□□ 0.38
CDK12-201ENST00000430627 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
CDK12-201ENST00000430627 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
CDK12-201ENST00000430627 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
CDK12-201ENST00000430627 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
CDK12-201ENST00000430627 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
CDK12-201ENST00000430627 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
CDK12-201ENST00000430627 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
CDK12-201ENST00000430627 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK12-201ENST00000430627 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
CDK12-201ENST00000430627 PDE4CQ08493 712 aa17.38■□□□□ 0.37
CDK12-201ENST00000430627 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
CDK12-201ENST00000430627 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
CDK12-201ENST00000430627 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
CDK12-201ENST00000430627 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
CDK12-201ENST00000430627 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
CDK12-201ENST00000430627 RAD21O60216 631 aa17.33■□□□□ 0.37
CDK12-201ENST00000430627 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
CDK12-201ENST00000430627 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
CDK12-201ENST00000430627 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
CDK12-201ENST00000430627 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
CDK12-201ENST00000430627 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
CDK12-201ENST00000430627 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
CDK12-201ENST00000430627 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
CDK12-201ENST00000430627 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
CDK12-201ENST00000430627 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
CDK12-201ENST00000430627 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
CDK12-201ENST00000430627 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
CDK12-201ENST00000430627 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
CDK12-201ENST00000430627 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
CDK12-201ENST00000430627 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
CDK12-201ENST00000430627 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
CDK12-201ENST00000430627 NUTM2BA6NNL0 878 aaPredicted RBP17.22■□□□□ 0.35
CDK12-201ENST00000430627 NUTM2EB1AL46 878 aaPredicted RBP17.22■□□□□ 0.35
CDK12-201ENST00000430627 NUTM2AQ8IVF1 878 aaPredicted RBP17.22■□□□□ 0.35
CDK12-201ENST00000430627 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
CDK12-201ENST00000430627 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms