RNA–Protein interactions for RNA: ENST00000428670.7

ATP2B1-204, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP2B1, Length 7,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-204ENST00000428670 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
ATP2B1-204ENST00000428670 CARMIL1Q5VZK9 1371 aa11.35□□□□□ -0.59
ATP2B1-204ENST00000428670 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
ATP2B1-204ENST00000428670 RAPGEF2Q9Y4G8 1499 aa11.34□□□□□ -0.59
ATP2B1-204ENST00000428670 NBR1Q14596 966 aa11.33□□□□□ -0.6
ATP2B1-204ENST00000428670 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
ATP2B1-204ENST00000428670 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
ATP2B1-204ENST00000428670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATP2B1-204ENST00000428670 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
ATP2B1-204ENST00000428670 SMARCA2P51531 1590 aa11.31□□□□□ -0.6
ATP2B1-204ENST00000428670 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
ATP2B1-204ENST00000428670 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
ATP2B1-204ENST00000428670 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
ATP2B1-204ENST00000428670 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
ATP2B1-204ENST00000428670 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.61
ATP2B1-204ENST00000428670 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
ATP2B1-204ENST00000428670 EIF5BO60841 1220 aaKnown RBP11.26□□□□□ -0.61
ATP2B1-204ENST00000428670 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
ATP2B1-204ENST00000428670 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
ATP2B1-204ENST00000428670 ANP32AP39687 249 aaKnown RBP11.24□□□□□ -0.61
ATP2B1-204ENST00000428670 ANP32EQ9BTT0 268 aa11.24□□□□□ -0.61
ATP2B1-204ENST00000428670 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
ATP2B1-204ENST00000428670 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
ATP2B1-204ENST00000428670 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
ATP2B1-204ENST00000428670 CANXP27824 592 aaKnown RBP11.21□□□□□ -0.61
ATP2B1-204ENST00000428670 RGL3Q3MIN7 710 aa11.21□□□□□ -0.61
ATP2B1-204ENST00000428670 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
ATP2B1-204ENST00000428670 FOXD1Q16676 465 aa11.2□□□□□ -0.62
ATP2B1-204ENST00000428670 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
ATP2B1-204ENST00000428670 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
ATP2B1-204ENST00000428670 PLEKHD1A6NEE1 506 aa11.19□□□□□ -0.62
ATP2B1-204ENST00000428670 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
ATP2B1-204ENST00000428670 DHX57Q6P158 1386 aaKnown RBP11.18□□□□□ -0.62
ATP2B1-204ENST00000428670 ARHGAP35Q9NRY4 1499 aa11.18□□□□□ -0.62
ATP2B1-204ENST00000428670 FHOD3Q2V2M9 1422 aa11.15□□□□□ -0.62
ATP2B1-204ENST00000428670 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
ATP2B1-204ENST00000428670 CADPSQ9ULU8 1353 aa11.14□□□□□ -0.63
ATP2B1-204ENST00000428670 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
ATP2B1-204ENST00000428670 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
ATP2B1-204ENST00000428670 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
ATP2B1-204ENST00000428670 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
ATP2B1-204ENST00000428670 ARXQ96QS3 562 aa11.11□□□□□ -0.63
ATP2B1-204ENST00000428670 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
ATP2B1-204ENST00000428670 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
ATP2B1-204ENST00000428670 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
ATP2B1-204ENST00000428670 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 KIF21BO75037 1637 aa11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
ATP2B1-204ENST00000428670 DCAF11Q8TEB1 546 aa11.06□□□□□ -0.64
ATP2B1-204ENST00000428670 IGF1RP08069 1367 aa11.06□□□□□ -0.64
ATP2B1-204ENST00000428670 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATP2B1-204ENST00000428670 NEFMP07197 916 aa11.04□□□□□ -0.64
ATP2B1-204ENST00000428670 PPP4R2Q9NY27 417 aa11.04□□□□□ -0.64
ATP2B1-204ENST00000428670 PKD2Q13563 968 aa11.03□□□□□ -0.64
ATP2B1-204ENST00000428670 L3MBTL2Q969R5 705 aa11.03□□□□□ -0.64
ATP2B1-204ENST00000428670 ERCC6Q03468 1493 aa11.03□□□□□ -0.64
ATP2B1-204ENST00000428670 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
ATP2B1-204ENST00000428670 CC2D1BQ5T0F9 858 aaKnown RBP11.02□□□□□ -0.65
ATP2B1-204ENST00000428670 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
ATP2B1-204ENST00000428670 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
ATP2B1-204ENST00000428670 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
ATP2B1-204ENST00000428670 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
ATP2B1-204ENST00000428670 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
ATP2B1-204ENST00000428670 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
ATP2B1-204ENST00000428670 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
ATP2B1-204ENST00000428670 GOLGA6L2Q8N9W4 650 aaPredicted RBP11□□□□□ -0.65
ATP2B1-204ENST00000428670 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
ATP2B1-204ENST00000428670 KNSTRNQ9Y448 316 aa10.99□□□□□ -0.65
ATP2B1-204ENST00000428670 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
ATP2B1-204ENST00000428670 PLPPR3Q6T4P5 718 aa10.97□□□□□ -0.65
ATP2B1-204ENST00000428670 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
ATP2B1-204ENST00000428670 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
ATP2B1-204ENST00000428670 NUP155O75694 1391 aa10.94□□□□□ -0.66
ATP2B1-204ENST00000428670 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
ATP2B1-204ENST00000428670 CCDC18Q5T9S5 1454 aa10.93□□□□□ -0.66
ATP2B1-204ENST00000428670 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
ATP2B1-204ENST00000428670 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
ATP2B1-204ENST00000428670 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
ATP2B1-204ENST00000428670 UPF2Q9HAU5 1272 aaKnown RBP10.93□□□□□ -0.66
ATP2B1-204ENST00000428670 HNRNPMP52272 730 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■■□□ 16.8
ATP2B1-204ENST00000428670 PRXQ9BXM0 1461 aa10.91□□□□□ -0.66
ATP2B1-204ENST00000428670 DEKP35659 375 aaKnown RBP10.91□□□□□ -0.66
ATP2B1-204ENST00000428670 TOP2BQ02880 1626 aa10.9□□□□□ -0.66
ATP2B1-204ENST00000428670 ERICH3Q5RHP9 1530 aa10.9□□□□□ -0.66
ATP2B1-204ENST00000428670 CDCA8Q53HL2 280 aa10.9□□□□□ -0.66
ATP2B1-204ENST00000428670 CUX1P39880 1505 aa10.9□□□□□ -0.66
ATP2B1-204ENST00000428670 TMF1P82094 1093 aa10.9□□□□□ -0.67
ATP2B1-204ENST00000428670 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
ATP2B1-204ENST00000428670 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
ATP2B1-204ENST00000428670 FGD6Q6ZV73 1430 aa10.89□□□□□ -0.67
ATP2B1-204ENST00000428670 CFTRP13569 1480 aa10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 ANKRD30AQ9BXX3 1397 aa10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
ATP2B1-204ENST00000428670 RGS3P49796 1198 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms