RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 RIMBP3BA6NNM3 1639 aa10.67□□□□□ -0.7
PAPD4-203ENST00000428308 RIMBP3Q9UFD9 1639 aa10.67□□□□□ -0.7
PAPD4-203ENST00000428308 ARHGEF11O15085 1522 aa10.67□□□□□ -0.7
PAPD4-203ENST00000428308 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
PAPD4-203ENST00000428308 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
PAPD4-203ENST00000428308 RAD54L2Q9Y4B4 1467 aa10.66□□□□□ -0.7
PAPD4-203ENST00000428308 CUX1P39880 1505 aa10.66□□□□□ -0.7
PAPD4-203ENST00000428308 FOXD1Q16676 465 aa10.62□□□□□ -0.71
PAPD4-203ENST00000428308 POLA1P09884 1462 aaPredicted RBP10.62□□□□□ -0.71
PAPD4-203ENST00000428308 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
PAPD4-203ENST00000428308 EIF4G3O43432 1585 aaKnown RBP10.61□□□□□ -0.71
PAPD4-203ENST00000428308 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
PAPD4-203ENST00000428308 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
PAPD4-203ENST00000428308 SOGA1O94964 1423 aa10.6□□□□□ -0.71
PAPD4-203ENST00000428308 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
PAPD4-203ENST00000428308 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
PAPD4-203ENST00000428308 ARAP1Q96P48 1450 aa10.58□□□□□ -0.72
PAPD4-203ENST00000428308 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
PAPD4-203ENST00000428308 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
PAPD4-203ENST00000428308 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
PAPD4-203ENST00000428308 SNAPC4Q5SXM2 1469 aa10.54□□□□□ -0.72
PAPD4-203ENST00000428308 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
PAPD4-203ENST00000428308 CHD1O14646 1710 aa10.52□□□□□ -0.73
PAPD4-203ENST00000428308 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
PAPD4-203ENST00000428308 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
PAPD4-203ENST00000428308 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
PAPD4-203ENST00000428308 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
PAPD4-203ENST00000428308 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
PAPD4-203ENST00000428308 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
PAPD4-203ENST00000428308 NBR1Q14596 966 aa10.47□□□□□ -0.73
PAPD4-203ENST00000428308 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
PAPD4-203ENST00000428308 WDR97A6NE52 1622 aa10.46□□□□□ -0.73
PAPD4-203ENST00000428308 GRIN2BQ13224 1484 aa10.46□□□□□ -0.74
PAPD4-203ENST00000428308 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
PAPD4-203ENST00000428308 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
PAPD4-203ENST00000428308 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
PAPD4-203ENST00000428308 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
PAPD4-203ENST00000428308 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
PAPD4-203ENST00000428308 PKD2Q13563 968 aa10.43□□□□□ -0.74
PAPD4-203ENST00000428308 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
PAPD4-203ENST00000428308 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
PAPD4-203ENST00000428308 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
PAPD4-203ENST00000428308 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
PAPD4-203ENST00000428308 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
PAPD4-203ENST00000428308 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
PAPD4-203ENST00000428308 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
PAPD4-203ENST00000428308 FAM9AQ8IZU1 332 aaPredicted RBP10.39□□□□□ -0.75
PAPD4-203ENST00000428308 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
PAPD4-203ENST00000428308 MYT1Q01538 1121 aa10.38□□□□□ -0.75
PAPD4-203ENST00000428308 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
PAPD4-203ENST00000428308 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
PAPD4-203ENST00000428308 GRIN2AQ12879 1464 aa10.33□□□□□ -0.76
PAPD4-203ENST00000428308 PIAS4Q8N2W9 510 aaPredicted RBP10.31□□□□□ -0.76
PAPD4-203ENST00000428308 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
PAPD4-203ENST00000428308 ADAMTS12P58397 1594 aa10.3□□□□□ -0.76
PAPD4-203ENST00000428308 CEP170Q5SW79 1584 aa10.3□□□□□ -0.76
PAPD4-203ENST00000428308 IGF1RP08069 1367 aa10.3□□□□□ -0.76
PAPD4-203ENST00000428308 MSH5O43196 834 aa10.3□□□□□ -0.76
PAPD4-203ENST00000428308 NUP160Q12769 1436 aa10.3□□□□□ -0.76
PAPD4-203ENST00000428308 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
PAPD4-203ENST00000428308 HRCP23327 699 aa10.29□□□□□ -0.76
PAPD4-203ENST00000428308 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
PAPD4-203ENST00000428308 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
PAPD4-203ENST00000428308 PRG4Q92954 1404 aaPredicted RBP10.27□□□□□ -0.76
PAPD4-203ENST00000428308 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.76
PAPD4-203ENST00000428308 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
PAPD4-203ENST00000428308 ERICH3Q5RHP9 1530 aa10.25□□□□□ -0.77
PAPD4-203ENST00000428308 FAM69CQ0P6D2 419 aa10.25□□□□□ -0.77
PAPD4-203ENST00000428308 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
PAPD4-203ENST00000428308 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
PAPD4-203ENST00000428308 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
PAPD4-203ENST00000428308 SHROOM2Q13796 1616 aa10.17□□□□□ -0.78
PAPD4-203ENST00000428308 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
PAPD4-203ENST00000428308 CUL7Q14999 1698 aa10.17□□□□□ -0.78
PAPD4-203ENST00000428308 SCAF1Q9H7N4 1312 aaKnown RBP10.16□□□□□ -0.78
PAPD4-203ENST00000428308 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
PAPD4-203ENST00000428308 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
PAPD4-203ENST00000428308 ABCC10Q5T3U5 1492 aa10.12□□□□□ -0.79
PAPD4-203ENST00000428308 PRXQ9BXM0 1461 aa10.11□□□□□ -0.79
PAPD4-203ENST00000428308 ARID3CA6NKF2 412 aa10.11□□□□□ -0.79
PAPD4-203ENST00000428308 KIAA0586Q9BVV6 1533 aa10.1□□□□□ -0.79
PAPD4-203ENST00000428308 PTPRGP23470 1445 aa10.1□□□□□ -0.79
PAPD4-203ENST00000428308 KIF13AQ9H1H9 1805 aa10.09□□□□□ -0.79
PAPD4-203ENST00000428308 ADCY10Q96PN6 1610 aa10.09□□□□□ -0.79
PAPD4-203ENST00000428308 IQGAP2Q13576 1575 aa10.08□□□□□ -0.8
PAPD4-203ENST00000428308 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
PAPD4-203ENST00000428308 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
PAPD4-203ENST00000428308 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
PAPD4-203ENST00000428308 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
PAPD4-203ENST00000428308 EIF5BO60841 1220 aaKnown RBP10.06□□□□□ -0.8
PAPD4-203ENST00000428308 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
PAPD4-203ENST00000428308 DIP2BQ9P265 1576 aa10.05□□□□□ -0.8
PAPD4-203ENST00000428308 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
PAPD4-203ENST00000428308 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-203ENST00000428308 TNIKQ9UKE5 1360 aa10.03□□□□□ -0.8
PAPD4-203ENST00000428308 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-203ENST00000428308 ASXL2Q76L83 1435 aa10.02□□□□□ -0.8
PAPD4-203ENST00000428308 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
PAPD4-203ENST00000428308 TSPOAP1O95153 1857 aa10□□□□□ -0.81
PAPD4-203ENST00000428308 RGL2O15211 777 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms