RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
NCKIPSD-205ENST00000426678 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
NCKIPSD-205ENST00000426678 PRG4Q92954 1404 aaPredicted RBP24.67■■□□□ 1.54
NCKIPSD-205ENST00000426678 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
NCKIPSD-205ENST00000426678 IQGAP2Q13576 1575 aa24.54■■□□□ 1.52
NCKIPSD-205ENST00000426678 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
NCKIPSD-205ENST00000426678 PRXQ9BXM0 1461 aa24.45■■□□□ 1.5
NCKIPSD-205ENST00000426678 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
NCKIPSD-205ENST00000426678 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
NCKIPSD-205ENST00000426678 EEA1Q15075 1411 aa24.42■■□□□ 1.5
NCKIPSD-205ENST00000426678 UGGT2Q9NYU1 1516 aa24.37■■□□□ 1.49
NCKIPSD-205ENST00000426678 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
NCKIPSD-205ENST00000426678 PTPRGP23470 1445 aa24.35■■□□□ 1.49
NCKIPSD-205ENST00000426678 TNIKQ9UKE5 1360 aa24.35■■□□□ 1.49
NCKIPSD-205ENST00000426678 DISP1Q96F81 1524 aa24.34■■□□□ 1.49
NCKIPSD-205ENST00000426678 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
NCKIPSD-205ENST00000426678 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.49
NCKIPSD-205ENST00000426678 TTBK1Q5TCY1 1321 aaPredicted RBP24.32■■□□□ 1.48
NCKIPSD-205ENST00000426678 KIAA0556O60303 1618 aa24.31■■□□□ 1.48
NCKIPSD-205ENST00000426678 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
NCKIPSD-205ENST00000426678 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
NCKIPSD-205ENST00000426678 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
NCKIPSD-205ENST00000426678 MAPKBP1O60336 1514 aa24.23■■□□□ 1.47
NCKIPSD-205ENST00000426678 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
NCKIPSD-205ENST00000426678 KIF21BO75037 1637 aa24.18■■□□□ 1.46
NCKIPSD-205ENST00000426678 ABCC2Q92887 1545 aa24.18■■□□□ 1.46
NCKIPSD-205ENST00000426678 UHRF1BP1LA0JNW5 1464 aa24.18■■□□□ 1.46
NCKIPSD-205ENST00000426678 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
NCKIPSD-205ENST00000426678 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
NCKIPSD-205ENST00000426678 DIP2BQ9P265 1576 aa24.1■■□□□ 1.45
NCKIPSD-205ENST00000426678 FAM69CQ0P6D2 419 aa24.08■■□□□ 1.45
NCKIPSD-205ENST00000426678 SAMD9Q5K651 1589 aa24.07■■□□□ 1.44
NCKIPSD-205ENST00000426678 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
NCKIPSD-205ENST00000426678 KDM5BQ9UGL1 1544 aa24.05■■□□□ 1.44
NCKIPSD-205ENST00000426678 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
NCKIPSD-205ENST00000426678 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
NCKIPSD-205ENST00000426678 P3H3Q8IVL6 736 aa24.03■■□□□ 1.44
NCKIPSD-205ENST00000426678 ABCA8O94911 1581 aa24.03■■□□□ 1.44
NCKIPSD-205ENST00000426678 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
NCKIPSD-205ENST00000426678 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
NCKIPSD-205ENST00000426678 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
NCKIPSD-205ENST00000426678 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
NCKIPSD-205ENST00000426678 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
NCKIPSD-205ENST00000426678 TSPOAP1O95153 1857 aa23.92■■□□□ 1.42
NCKIPSD-205ENST00000426678 GLI2P10070 1586 aa23.91■■□□□ 1.42
NCKIPSD-205ENST00000426678 RAPGEF6Q8TEU7 1601 aa23.9■■□□□ 1.42
NCKIPSD-205ENST00000426678 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
NCKIPSD-205ENST00000426678 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
NCKIPSD-205ENST00000426678 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
NCKIPSD-205ENST00000426678 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
NCKIPSD-205ENST00000426678 ATP10BO94823 1461 aa23.81■■□□□ 1.4
NCKIPSD-205ENST00000426678 KDM6BO15054 1643 aa23.79■■□□□ 1.4
NCKIPSD-205ENST00000426678 PPRC1Q5VV67 1664 aaKnown RBP23.79■■□□□ 1.4
NCKIPSD-205ENST00000426678 NUP153P49790 1475 aaKnown RBP23.78■■□□□ 1.4
NCKIPSD-205ENST00000426678 ARHGAP35Q9NRY4 1499 aa23.76■■□□□ 1.39
NCKIPSD-205ENST00000426678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
NCKIPSD-205ENST00000426678 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
NCKIPSD-205ENST00000426678 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
NCKIPSD-205ENST00000426678 TEX14Q8IWB6 1497 aa23.74■■□□□ 1.39
NCKIPSD-205ENST00000426678 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
NCKIPSD-205ENST00000426678 FMN1Q68DA7 1419 aa23.72■■□□□ 1.39
NCKIPSD-205ENST00000426678 CD109Q6YHK3 1445 aa23.68■■□□□ 1.38
NCKIPSD-205ENST00000426678 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
NCKIPSD-205ENST00000426678 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.38
NCKIPSD-205ENST00000426678 ABCA9Q8IUA7 1624 aa23.62■■□□□ 1.37
NCKIPSD-205ENST00000426678 CDK13Q14004 1512 aaKnown RBP23.6■■□□□ 1.37
NCKIPSD-205ENST00000426678 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
NCKIPSD-205ENST00000426678 ATP1B4Q9UN42 357 aaPredicted RBP23.6■■□□□ 1.37
NCKIPSD-205ENST00000426678 CLIP1P30622 1438 aa23.58■■□□□ 1.36
NCKIPSD-205ENST00000426678 COL17A1Q9UMD9 1497 aaPredicted RBP23.54■■□□□ 1.36
NCKIPSD-205ENST00000426678 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
NCKIPSD-205ENST00000426678 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
NCKIPSD-205ENST00000426678 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
NCKIPSD-205ENST00000426678 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
NCKIPSD-205ENST00000426678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.47■■□□□ 1.35
NCKIPSD-205ENST00000426678 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
NCKIPSD-205ENST00000426678 TTC37Q6PGP7 1564 aa23.45■■□□□ 1.34
NCKIPSD-205ENST00000426678 NEO1Q92859 1461 aa23.45■■□□□ 1.34
NCKIPSD-205ENST00000426678 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.34
NCKIPSD-205ENST00000426678 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
NCKIPSD-205ENST00000426678 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
NCKIPSD-205ENST00000426678 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
NCKIPSD-205ENST00000426678 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
NCKIPSD-205ENST00000426678 KIF14Q15058 1648 aa23.41■■□□□ 1.34
NCKIPSD-205ENST00000426678 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
NCKIPSD-205ENST00000426678 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
NCKIPSD-205ENST00000426678 FANCAO15360 1455 aa23.37■■□□□ 1.33
NCKIPSD-205ENST00000426678 MYO5CQ9NQX4 1742 aa23.35■■□□□ 1.33
NCKIPSD-205ENST00000426678 AKNAQ7Z591 1439 aa23.33■■□□□ 1.32
NCKIPSD-205ENST00000426678 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
NCKIPSD-205ENST00000426678 PLCH2O75038 1416 aa23.32■■□□□ 1.32
NCKIPSD-205ENST00000426678 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
NCKIPSD-205ENST00000426678 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
NCKIPSD-205ENST00000426678 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
NCKIPSD-205ENST00000426678 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
NCKIPSD-205ENST00000426678 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
NCKIPSD-205ENST00000426678 ARHGAP5Q13017 1502 aa23.25■■□□□ 1.31
NCKIPSD-205ENST00000426678 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
NCKIPSD-205ENST00000426678 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
NCKIPSD-205ENST00000426678 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms