RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
CTCFL-206ENST00000426658 CCER2I3L3R5 266 aa14.23□□□□□ -0.13
CTCFL-206ENST00000426658 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
CTCFL-206ENST00000426658 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
CTCFL-206ENST00000426658 TONSLQ96HA7 1378 aa14.21□□□□□ -0.14
CTCFL-206ENST00000426658 ZNF326Q5BKZ1 582 aaKnown RBP14.2□□□□□ -0.14
CTCFL-206ENST00000426658 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
CTCFL-206ENST00000426658 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
CTCFL-206ENST00000426658 TIMELESSQ9UNS1 1208 aa14.17□□□□□ -0.14
CTCFL-206ENST00000426658 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
CTCFL-206ENST00000426658 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
CTCFL-206ENST00000426658 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
CTCFL-206ENST00000426658 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
CTCFL-206ENST00000426658 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
CTCFL-206ENST00000426658 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
CTCFL-206ENST00000426658 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
CTCFL-206ENST00000426658 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
CTCFL-206ENST00000426658 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
CTCFL-206ENST00000426658 CUX2O14529 1486 aa14.09□□□□□ -0.15
CTCFL-206ENST00000426658 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
CTCFL-206ENST00000426658 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
CTCFL-206ENST00000426658 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
CTCFL-206ENST00000426658 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
CTCFL-206ENST00000426658 MAPKBP1O60336 1514 aa14.03□□□□□ -0.16
CTCFL-206ENST00000426658 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
CTCFL-206ENST00000426658 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
CTCFL-206ENST00000426658 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
CTCFL-206ENST00000426658 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
CTCFL-206ENST00000426658 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
CTCFL-206ENST00000426658 MSH5O43196 834 aa14.01□□□□□ -0.17
CTCFL-206ENST00000426658 CARMIL1Q5VZK9 1371 aa14.01□□□□□ -0.17
CTCFL-206ENST00000426658 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
CTCFL-206ENST00000426658 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-206ENST00000426658 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
CTCFL-206ENST00000426658 SALL2Q9Y467 1007 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-206ENST00000426658 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-206ENST00000426658 NBR1Q14596 966 aa13.98□□□□□ -0.17
CTCFL-206ENST00000426658 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
CTCFL-206ENST00000426658 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTCFL-206ENST00000426658 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
CTCFL-206ENST00000426658 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.18
CTCFL-206ENST00000426658 TIAM1Q13009 1591 aa13.95□□□□□ -0.18
CTCFL-206ENST00000426658 CUX1P39880 1505 aa13.94□□□□□ -0.18
CTCFL-206ENST00000426658 DEKP35659 375 aaKnown RBP13.94□□□□□ -0.18
CTCFL-206ENST00000426658 IGF1RP08069 1367 aa13.93□□□□□ -0.18
CTCFL-206ENST00000426658 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
CTCFL-206ENST00000426658 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
CTCFL-206ENST00000426658 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
CTCFL-206ENST00000426658 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
CTCFL-206ENST00000426658 FOXD1Q16676 465 aa13.91□□□□□ -0.18
CTCFL-206ENST00000426658 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
CTCFL-206ENST00000426658 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
CTCFL-206ENST00000426658 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
CTCFL-206ENST00000426658 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
CTCFL-206ENST00000426658 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
CTCFL-206ENST00000426658 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-206ENST00000426658 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTCFL-206ENST00000426658 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-206ENST00000426658 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
CTCFL-206ENST00000426658 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.19
CTCFL-206ENST00000426658 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.19
CTCFL-206ENST00000426658 UACAQ9BZF9 1416 aa13.83□□□□□ -0.2
CTCFL-206ENST00000426658 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
CTCFL-206ENST00000426658 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
CTCFL-206ENST00000426658 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-206ENST00000426658 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-206ENST00000426658 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
CTCFL-206ENST00000426658 CFTRP13569 1480 aa13.79□□□□□ -0.2
CTCFL-206ENST00000426658 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
CTCFL-206ENST00000426658 CCDC184Q52MB2 194 aa13.79□□□□□ -0.2
CTCFL-206ENST00000426658 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
CTCFL-206ENST00000426658 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
CTCFL-206ENST00000426658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTCFL-206ENST00000426658 L3MBTL2Q969R5 705 aa13.77□□□□□ -0.21
CTCFL-206ENST00000426658 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
CTCFL-206ENST00000426658 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
CTCFL-206ENST00000426658 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
CTCFL-206ENST00000426658 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
CTCFL-206ENST00000426658 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
CTCFL-206ENST00000426658 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
CTCFL-206ENST00000426658 MPHOSPH9Q99550 1183 aa13.74□□□□□ -0.21
CTCFL-206ENST00000426658 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
CTCFL-206ENST00000426658 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-206ENST00000426658 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
CTCFL-206ENST00000426658 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
CTCFL-206ENST00000426658 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-206ENST00000426658 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
CTCFL-206ENST00000426658 HMGXB3Q12766 1538 aa13.71□□□□□ -0.22
CTCFL-206ENST00000426658 NUDCQ9Y266 331 aa13.71□□□□□ -0.22
CTCFL-206ENST00000426658 NAIPQ13075 1403 aa13.7□□□□□ -0.22
CTCFL-206ENST00000426658 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
CTCFL-206ENST00000426658 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
CTCFL-206ENST00000426658 MYOM3Q5VTT5 1437 aa13.69□□□□□ -0.22
CTCFL-206ENST00000426658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.221e-10■□□□□ 8.3
CTCFL-206ENST00000426658 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
CTCFL-206ENST00000426658 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-206ENST00000426658 RGL3Q3MIN7 710 aa13.66□□□□□ -0.22
CTCFL-206ENST00000426658 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
CTCFL-206ENST00000426658 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
CTCFL-206ENST00000426658 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms