RNA–Protein interactions for RNA: ENST00000426344.5

SNAP47-205, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 2

Gene SNAP47, Length 2,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-205ENST00000426344 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
SNAP47-205ENST00000426344 FAM50AQ14320 339 aaKnown RBP17.5■□□□□ 0.39
SNAP47-205ENST00000426344 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
SNAP47-205ENST00000426344 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
SNAP47-205ENST00000426344 NESP48681 1621 aa17.47■□□□□ 0.39
SNAP47-205ENST00000426344 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
SNAP47-205ENST00000426344 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
SNAP47-205ENST00000426344 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
SNAP47-205ENST00000426344 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
SNAP47-205ENST00000426344 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
SNAP47-205ENST00000426344 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
SNAP47-205ENST00000426344 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
SNAP47-205ENST00000426344 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
SNAP47-205ENST00000426344 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SNAP47-205ENST00000426344 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
SNAP47-205ENST00000426344 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
SNAP47-205ENST00000426344 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
SNAP47-205ENST00000426344 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
SNAP47-205ENST00000426344 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
SNAP47-205ENST00000426344 FYCO1Q9BQS8 1478 aa17.32■□□□□ 0.36
SNAP47-205ENST00000426344 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
SNAP47-205ENST00000426344 CUL7Q14999 1698 aa17.3■□□□□ 0.36
SNAP47-205ENST00000426344 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
SNAP47-205ENST00000426344 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
SNAP47-205ENST00000426344 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.35
SNAP47-205ENST00000426344 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
SNAP47-205ENST00000426344 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
SNAP47-205ENST00000426344 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
SNAP47-205ENST00000426344 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.357e-7■■■■■ 29.1
SNAP47-205ENST00000426344 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
SNAP47-205ENST00000426344 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
SNAP47-205ENST00000426344 DDX10Q13206 875 aaKnown RBP17.23■□□□□ 0.35
SNAP47-205ENST00000426344 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
SNAP47-205ENST00000426344 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
SNAP47-205ENST00000426344 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
SNAP47-205ENST00000426344 GAPVD1Q14C86 1478 aa17.22■□□□□ 0.35
SNAP47-205ENST00000426344 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
SNAP47-205ENST00000426344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.347e-10■■■■■ 69.8
SNAP47-205ENST00000426344 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
SNAP47-205ENST00000426344 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
SNAP47-205ENST00000426344 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
SNAP47-205ENST00000426344 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
SNAP47-205ENST00000426344 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
SNAP47-205ENST00000426344 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
SNAP47-205ENST00000426344 SAMD9Q5K651 1589 aa17.14■□□□□ 0.33
SNAP47-205ENST00000426344 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
SNAP47-205ENST00000426344 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
SNAP47-205ENST00000426344 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
SNAP47-205ENST00000426344 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
SNAP47-205ENST00000426344 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
SNAP47-205ENST00000426344 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
SNAP47-205ENST00000426344 HFM1A2PYH4 1435 aa17.1■□□□□ 0.33
SNAP47-205ENST00000426344 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
SNAP47-205ENST00000426344 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
SNAP47-205ENST00000426344 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
SNAP47-205ENST00000426344 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
SNAP47-205ENST00000426344 NAIPQ13075 1403 aa17.06■□□□□ 0.32
SNAP47-205ENST00000426344 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
SNAP47-205ENST00000426344 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
SNAP47-205ENST00000426344 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
SNAP47-205ENST00000426344 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
SNAP47-205ENST00000426344 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
SNAP47-205ENST00000426344 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
SNAP47-205ENST00000426344 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
SNAP47-205ENST00000426344 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
SNAP47-205ENST00000426344 ANP32CO43423 234 aa17.01■□□□□ 0.31
SNAP47-205ENST00000426344 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
SNAP47-205ENST00000426344 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
SNAP47-205ENST00000426344 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
SNAP47-205ENST00000426344 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
SNAP47-205ENST00000426344 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
SNAP47-205ENST00000426344 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
SNAP47-205ENST00000426344 CDK13Q14004 1512 aaKnown RBP16.95■□□□□ 0.3
SNAP47-205ENST00000426344 BCANQ96GW7 911 aa16.94■□□□□ 0.3
SNAP47-205ENST00000426344 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
SNAP47-205ENST00000426344 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
SNAP47-205ENST00000426344 FKBP8Q14318 412 aa16.91■□□□□ 0.3
SNAP47-205ENST00000426344 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
SNAP47-205ENST00000426344 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
SNAP47-205ENST00000426344 FOXD1Q16676 465 aa16.9■□□□□ 0.3
SNAP47-205ENST00000426344 KDM6BO15054 1643 aa16.88■□□□□ 0.29
SNAP47-205ENST00000426344 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
SNAP47-205ENST00000426344 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-205ENST00000426344 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
SNAP47-205ENST00000426344 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
SNAP47-205ENST00000426344 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-205ENST00000426344 WDR62O43379 1518 aa16.86■□□□□ 0.29
SNAP47-205ENST00000426344 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
SNAP47-205ENST00000426344 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
SNAP47-205ENST00000426344 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
SNAP47-205ENST00000426344 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
SNAP47-205ENST00000426344 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
SNAP47-205ENST00000426344 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
SNAP47-205ENST00000426344 WASHC2AQ641Q2 1341 aa16.82■□□□□ 0.28
SNAP47-205ENST00000426344 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
SNAP47-205ENST00000426344 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■■■ 38.7
SNAP47-205ENST00000426344 NEFLP07196 543 aa16.8■□□□□ 0.28
SNAP47-205ENST00000426344 PRKCSHP14314 528 aaPredicted RBP16.79■□□□□ 0.28
SNAP47-205ENST00000426344 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
SNAP47-205ENST00000426344 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms