RNA–Protein interactions for RNA: ENST00000425597.7

SCAMP5-202, Transcript of secretory carrier membrane protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP5, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-202ENST00000425597 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
SCAMP5-202ENST00000425597 CCNB3Q8WWL7 1395 aa20.8■□□□□ 0.92
SCAMP5-202ENST00000425597 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
SCAMP5-202ENST00000425597 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
SCAMP5-202ENST00000425597 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
SCAMP5-202ENST00000425597 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
SCAMP5-202ENST00000425597 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
SCAMP5-202ENST00000425597 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
SCAMP5-202ENST00000425597 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
SCAMP5-202ENST00000425597 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
SCAMP5-202ENST00000425597 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
SCAMP5-202ENST00000425597 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
SCAMP5-202ENST00000425597 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
SCAMP5-202ENST00000425597 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
SCAMP5-202ENST00000425597 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
SCAMP5-202ENST00000425597 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
SCAMP5-202ENST00000425597 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
SCAMP5-202ENST00000425597 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
SCAMP5-202ENST00000425597 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
SCAMP5-202ENST00000425597 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
SCAMP5-202ENST00000425597 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
SCAMP5-202ENST00000425597 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
SCAMP5-202ENST00000425597 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SCAMP5-202ENST00000425597 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
SCAMP5-202ENST00000425597 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
SCAMP5-202ENST00000425597 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
SCAMP5-202ENST00000425597 TIAM1Q13009 1591 aa20.49■□□□□ 0.87
SCAMP5-202ENST00000425597 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
SCAMP5-202ENST00000425597 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
SCAMP5-202ENST00000425597 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SCAMP5-202ENST00000425597 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
SCAMP5-202ENST00000425597 FOXD1Q16676 465 aa20.46■□□□□ 0.87
SCAMP5-202ENST00000425597 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
SCAMP5-202ENST00000425597 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
SCAMP5-202ENST00000425597 FMN1Q68DA7 1419 aa20.41■□□□□ 0.86
SCAMP5-202ENST00000425597 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
SCAMP5-202ENST00000425597 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
SCAMP5-202ENST00000425597 BCANQ96GW7 911 aa20.33■□□□□ 0.84
SCAMP5-202ENST00000425597 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
SCAMP5-202ENST00000425597 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
SCAMP5-202ENST00000425597 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
SCAMP5-202ENST00000425597 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
SCAMP5-202ENST00000425597 PTPRKQ15262 1439 aa20.29■□□□□ 0.84
SCAMP5-202ENST00000425597 CDK13Q14004 1512 aaKnown RBP20.28■□□□□ 0.84
SCAMP5-202ENST00000425597 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
SCAMP5-202ENST00000425597 TONSLQ96HA7 1378 aa20.27■□□□□ 0.84
SCAMP5-202ENST00000425597 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
SCAMP5-202ENST00000425597 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
SCAMP5-202ENST00000425597 CUL7Q14999 1698 aa20.25■□□□□ 0.83
SCAMP5-202ENST00000425597 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
SCAMP5-202ENST00000425597 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
SCAMP5-202ENST00000425597 JPH4Q96JJ6 628 aa20.22■□□□□ 0.83
SCAMP5-202ENST00000425597 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
SCAMP5-202ENST00000425597 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
SCAMP5-202ENST00000425597 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
SCAMP5-202ENST00000425597 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
SCAMP5-202ENST00000425597 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
SCAMP5-202ENST00000425597 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
SCAMP5-202ENST00000425597 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
SCAMP5-202ENST00000425597 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
SCAMP5-202ENST00000425597 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
SCAMP5-202ENST00000425597 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
SCAMP5-202ENST00000425597 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
SCAMP5-202ENST00000425597 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
SCAMP5-202ENST00000425597 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
SCAMP5-202ENST00000425597 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
SCAMP5-202ENST00000425597 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
SCAMP5-202ENST00000425597 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
SCAMP5-202ENST00000425597 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
SCAMP5-202ENST00000425597 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
SCAMP5-202ENST00000425597 EPRSP07814 1512 aaKnown RBP20.1■□□□□ 0.81
SCAMP5-202ENST00000425597 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
SCAMP5-202ENST00000425597 ANP32CO43423 234 aa20.09■□□□□ 0.81
SCAMP5-202ENST00000425597 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
SCAMP5-202ENST00000425597 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.81
SCAMP5-202ENST00000425597 CFAP43Q8NDM7 1665 aa20.08■□□□□ 0.8
SCAMP5-202ENST00000425597 NAIPQ13075 1403 aa20.07■□□□□ 0.8
SCAMP5-202ENST00000425597 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SCAMP5-202ENST00000425597 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
SCAMP5-202ENST00000425597 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
SCAMP5-202ENST00000425597 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
SCAMP5-202ENST00000425597 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
SCAMP5-202ENST00000425597 ADAMTS12P58397 1594 aa20.02■□□□□ 0.8
SCAMP5-202ENST00000425597 PBRM1Q86U86 1689 aa20.02■□□□□ 0.79
SCAMP5-202ENST00000425597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.79
SCAMP5-202ENST00000425597 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.79
SCAMP5-202ENST00000425597 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
SCAMP5-202ENST00000425597 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
SCAMP5-202ENST00000425597 FKBP8Q14318 412 aa20.01■□□□□ 0.79
SCAMP5-202ENST00000425597 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
SCAMP5-202ENST00000425597 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
SCAMP5-202ENST00000425597 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
SCAMP5-202ENST00000425597 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
SCAMP5-202ENST00000425597 HSPA5P11021 654 aaKnown RBP19.96■□□□□ 0.79
SCAMP5-202ENST00000425597 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
SCAMP5-202ENST00000425597 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
SCAMP5-202ENST00000425597 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
SCAMP5-202ENST00000425597 SUPT6HQ7KZ85 1726 aaKnown RBP19.95■□□□□ 0.78
SCAMP5-202ENST00000425597 PTPN23Q9H3S7 1636 aa19.95■□□□□ 0.78
SCAMP5-202ENST00000425597 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms