RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
TMEM248-204ENST00000424964 PRXQ9BXM0 1461 aa24.59■■□□□ 1.53
TMEM248-204ENST00000424964 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
TMEM248-204ENST00000424964 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
TMEM248-204ENST00000424964 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
TMEM248-204ENST00000424964 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
TMEM248-204ENST00000424964 PRG4Q92954 1404 aaPredicted RBP24.47■■□□□ 1.51
TMEM248-204ENST00000424964 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
TMEM248-204ENST00000424964 IQGAP2Q13576 1575 aa24.44■■□□□ 1.5
TMEM248-204ENST00000424964 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
TMEM248-204ENST00000424964 CTTNBP2Q8WZ74 1663 aa24.4■■□□□ 1.5
TMEM248-204ENST00000424964 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
TMEM248-204ENST00000424964 KIF21BO75037 1637 aa24.39■■□□□ 1.5
TMEM248-204ENST00000424964 CARMIL2Q6F5E8 1435 aa24.33■■□□□ 1.49
TMEM248-204ENST00000424964 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
TMEM248-204ENST00000424964 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
TMEM248-204ENST00000424964 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
TMEM248-204ENST00000424964 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
TMEM248-204ENST00000424964 DISP1Q96F81 1524 aa24.25■■□□□ 1.47
TMEM248-204ENST00000424964 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-204ENST00000424964 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
TMEM248-204ENST00000424964 PTPRGP23470 1445 aa24.21■■□□□ 1.47
TMEM248-204ENST00000424964 KIAA0556O60303 1618 aa24.2■■□□□ 1.46
TMEM248-204ENST00000424964 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
TMEM248-204ENST00000424964 SAMD9Q5K651 1589 aa24.08■■□□□ 1.44
TMEM248-204ENST00000424964 NPM1P06748 294 aaKnown RBP eCLIP24.06■■□□□ 1.44
TMEM248-204ENST00000424964 ADCY10Q96PN6 1610 aa24.04■■□□□ 1.44
TMEM248-204ENST00000424964 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
TMEM248-204ENST00000424964 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
TMEM248-204ENST00000424964 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
TMEM248-204ENST00000424964 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
TMEM248-204ENST00000424964 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
TMEM248-204ENST00000424964 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
TMEM248-204ENST00000424964 ABCC2Q92887 1545 aa23.95■■□□□ 1.43
TMEM248-204ENST00000424964 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
TMEM248-204ENST00000424964 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
TMEM248-204ENST00000424964 ABCA8O94911 1581 aa23.92■■□□□ 1.42
TMEM248-204ENST00000424964 CLIP1P30622 1438 aa23.88■■□□□ 1.41
TMEM248-204ENST00000424964 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
TMEM248-204ENST00000424964 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
TMEM248-204ENST00000424964 RAPGEF6Q8TEU7 1601 aa23.84■■□□□ 1.41
TMEM248-204ENST00000424964 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
TMEM248-204ENST00000424964 FMN1Q68DA7 1419 aa23.83■■□□□ 1.4
TMEM248-204ENST00000424964 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
TMEM248-204ENST00000424964 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
TMEM248-204ENST00000424964 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
TMEM248-204ENST00000424964 ASXL2Q76L83 1435 aa23.78■■□□□ 1.4
TMEM248-204ENST00000424964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
TMEM248-204ENST00000424964 HNRNPUL2Q1KMD3 747 aaKnown RBP23.77■■□□□ 1.4
TMEM248-204ENST00000424964 ATP10BO94823 1461 aa23.76■■□□□ 1.39
TMEM248-204ENST00000424964 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
TMEM248-204ENST00000424964 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
TMEM248-204ENST00000424964 ABCC10Q5T3U5 1492 aa23.73■■□□□ 1.39
TMEM248-204ENST00000424964 KIF13AQ9H1H9 1805 aa23.7■■□□□ 1.38
TMEM248-204ENST00000424964 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
TMEM248-204ENST00000424964 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
TMEM248-204ENST00000424964 WDR7Q9Y4E6 1490 aa23.68■■□□□ 1.38
TMEM248-204ENST00000424964 KCNH8Q96L42 1107 aa23.67■■□□□ 1.38
TMEM248-204ENST00000424964 CASKIN1Q8WXD9 1431 aa23.65■■□□□ 1.38
TMEM248-204ENST00000424964 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
TMEM248-204ENST00000424964 PCF11O94913 1555 aaKnown RBP23.63■■□□□ 1.37
TMEM248-204ENST00000424964 EPRSP07814 1512 aaKnown RBP23.63■■□□□ 1.37
TMEM248-204ENST00000424964 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
TMEM248-204ENST00000424964 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
TMEM248-204ENST00000424964 GLI2P10070 1586 aa23.58■■□□□ 1.37
TMEM248-204ENST00000424964 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
TMEM248-204ENST00000424964 TSPOAP1O95153 1857 aa23.56■■□□□ 1.36
TMEM248-204ENST00000424964 LRRIQ1Q96JM4 1722 aa23.55■■□□□ 1.36
TMEM248-204ENST00000424964 CCDC18Q5T9S5 1454 aa23.53■■□□□ 1.36
TMEM248-204ENST00000424964 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
TMEM248-204ENST00000424964 MAP3K4Q9Y6R4 1608 aa23.48■■□□□ 1.35
TMEM248-204ENST00000424964 CD109Q6YHK3 1445 aa23.48■■□□□ 1.35
TMEM248-204ENST00000424964 CFAP43Q8NDM7 1665 aa23.46■■□□□ 1.35
TMEM248-204ENST00000424964 TROQ12816 1431 aaPredicted RBP23.43■■□□□ 1.34
TMEM248-204ENST00000424964 ABCA9Q8IUA7 1624 aa23.43■■□□□ 1.34
TMEM248-204ENST00000424964 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
TMEM248-204ENST00000424964 TEX14Q8IWB6 1497 aa23.4■■□□□ 1.34
TMEM248-204ENST00000424964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
TMEM248-204ENST00000424964 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
TMEM248-204ENST00000424964 KIF14Q15058 1648 aa23.37■■□□□ 1.33
TMEM248-204ENST00000424964 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
TMEM248-204ENST00000424964 TTC37Q6PGP7 1564 aa23.34■■□□□ 1.33
TMEM248-204ENST00000424964 APLP2Q06481 763 aa23.33■■□□□ 1.33
TMEM248-204ENST00000424964 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
TMEM248-204ENST00000424964 KDM6BO15054 1643 aa23.3■■□□□ 1.32
TMEM248-204ENST00000424964 PLCH2O75038 1416 aa23.26■■□□□ 1.31
TMEM248-204ENST00000424964 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
TMEM248-204ENST00000424964 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
TMEM248-204ENST00000424964 MAP3K1Q13233 1512 aa23.24■■□□□ 1.31
TMEM248-204ENST00000424964 FANCAO15360 1455 aa23.24■■□□□ 1.31
TMEM248-204ENST00000424964 PHLDB1Q86UU1 1377 aa23.23■■□□□ 1.31
TMEM248-204ENST00000424964 NEO1Q92859 1461 aa23.23■■□□□ 1.31
TMEM248-204ENST00000424964 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
TMEM248-204ENST00000424964 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
TMEM248-204ENST00000424964 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
TMEM248-204ENST00000424964 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
TMEM248-204ENST00000424964 CFAP74Q9C0B2 1584 aa23.2■■□□□ 1.3
TMEM248-204ENST00000424964 ARHGAP5Q13017 1502 aa23.19■■□□□ 1.3
TMEM248-204ENST00000424964 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
TMEM248-204ENST00000424964 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms