RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
TOP2B-203ENST00000424225 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
TOP2B-203ENST00000424225 APLP2Q06481 763 aa18.64■□□□□ 0.57
TOP2B-203ENST00000424225 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
TOP2B-203ENST00000424225 DDX10Q13206 875 aaKnown RBP18.64■□□□□ 0.57
TOP2B-203ENST00000424225 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
TOP2B-203ENST00000424225 CUX1P39880 1505 aa18.6■□□□□ 0.57
TOP2B-203ENST00000424225 TRIM52Q96A61 297 aa18.58■□□□□ 0.57
TOP2B-203ENST00000424225 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
TOP2B-203ENST00000424225 TIAM1Q13009 1591 aa18.46■□□□□ 0.55
TOP2B-203ENST00000424225 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
TOP2B-203ENST00000424225 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
TOP2B-203ENST00000424225 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
TOP2B-203ENST00000424225 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
TOP2B-203ENST00000424225 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
TOP2B-203ENST00000424225 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
TOP2B-203ENST00000424225 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
TOP2B-203ENST00000424225 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
TOP2B-203ENST00000424225 IGF1RP08069 1367 aa18.32■□□□□ 0.52
TOP2B-203ENST00000424225 CFTRP13569 1480 aa18.32■□□□□ 0.52
TOP2B-203ENST00000424225 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.525e-6■■■□□ 15.6
TOP2B-203ENST00000424225 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
TOP2B-203ENST00000424225 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
TOP2B-203ENST00000424225 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
TOP2B-203ENST00000424225 MAP3K1Q13233 1512 aa18.27■□□□□ 0.52
TOP2B-203ENST00000424225 WDR62O43379 1518 aa18.26■□□□□ 0.51
TOP2B-203ENST00000424225 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
TOP2B-203ENST00000424225 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
TOP2B-203ENST00000424225 P3H3Q8IVL6 736 aa18.24■□□□□ 0.51
TOP2B-203ENST00000424225 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
TOP2B-203ENST00000424225 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
TOP2B-203ENST00000424225 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
TOP2B-203ENST00000424225 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
TOP2B-203ENST00000424225 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
TOP2B-203ENST00000424225 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
TOP2B-203ENST00000424225 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
TOP2B-203ENST00000424225 ANP32CO43423 234 aa18.16■□□□□ 0.5
TOP2B-203ENST00000424225 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
TOP2B-203ENST00000424225 KDM6BO15054 1643 aa18.13■□□□□ 0.49
TOP2B-203ENST00000424225 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
TOP2B-203ENST00000424225 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
TOP2B-203ENST00000424225 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
TOP2B-203ENST00000424225 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
TOP2B-203ENST00000424225 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
TOP2B-203ENST00000424225 NEFLP07196 543 aa18.1■□□□□ 0.49
TOP2B-203ENST00000424225 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
TOP2B-203ENST00000424225 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
TOP2B-203ENST00000424225 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
TOP2B-203ENST00000424225 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
TOP2B-203ENST00000424225 NAIPQ13075 1403 aa18.05■□□□□ 0.48
TOP2B-203ENST00000424225 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
TOP2B-203ENST00000424225 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
TOP2B-203ENST00000424225 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
TOP2B-203ENST00000424225 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
TOP2B-203ENST00000424225 HFM1A2PYH4 1435 aa18.02■□□□□ 0.47
TOP2B-203ENST00000424225 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.47
TOP2B-203ENST00000424225 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
TOP2B-203ENST00000424225 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
TOP2B-203ENST00000424225 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
TOP2B-203ENST00000424225 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
TOP2B-203ENST00000424225 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
TOP2B-203ENST00000424225 DEKP35659 375 aaKnown RBP17.98■□□□□ 0.47
TOP2B-203ENST00000424225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■■□□□ 13.1
TOP2B-203ENST00000424225 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
TOP2B-203ENST00000424225 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
TOP2B-203ENST00000424225 CASKIN1Q8WXD9 1431 aa17.97■□□□□ 0.47
TOP2B-203ENST00000424225 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
TOP2B-203ENST00000424225 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.46
TOP2B-203ENST00000424225 NESP48681 1621 aa17.95■□□□□ 0.46
TOP2B-203ENST00000424225 FOXD1Q16676 465 aa17.95■□□□□ 0.46
TOP2B-203ENST00000424225 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
TOP2B-203ENST00000424225 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
TOP2B-203ENST00000424225 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
TOP2B-203ENST00000424225 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
TOP2B-203ENST00000424225 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
TOP2B-203ENST00000424225 PRKRIP1Q9H875 184 aaPredicted RBP17.9■□□□□ 0.46
TOP2B-203ENST00000424225 FAM9BQ8IZU0 186 aa17.9■□□□□ 0.46
TOP2B-203ENST00000424225 CNTLNQ9NXG0 1405 aa17.9■□□□□ 0.46
TOP2B-203ENST00000424225 CTTNBP2Q8WZ74 1663 aa17.88■□□□□ 0.45
TOP2B-203ENST00000424225 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
TOP2B-203ENST00000424225 NBR1Q14596 966 aa17.88■□□□□ 0.45
TOP2B-203ENST00000424225 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
TOP2B-203ENST00000424225 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
TOP2B-203ENST00000424225 ANO8Q9HCE9 1232 aaPredicted RBP17.85■□□□□ 0.45
TOP2B-203ENST00000424225 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
TOP2B-203ENST00000424225 SPATA31E1Q6ZUB1 1445 aa17.84■□□□□ 0.45
TOP2B-203ENST00000424225 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
TOP2B-203ENST00000424225 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
TOP2B-203ENST00000424225 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
TOP2B-203ENST00000424225 HECW1Q76N89 1606 aa17.83■□□□□ 0.45
TOP2B-203ENST00000424225 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
TOP2B-203ENST00000424225 BCORL1Q5H9F3 1711 aa17.83■□□□□ 0.45
TOP2B-203ENST00000424225 GRIN2BQ13224 1484 aa17.83■□□□□ 0.44
TOP2B-203ENST00000424225 GCC2Q8IWJ2 1684 aa17.82■□□□□ 0.44
TOP2B-203ENST00000424225 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
TOP2B-203ENST00000424225 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
TOP2B-203ENST00000424225 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
TOP2B-203ENST00000424225 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
TOP2B-203ENST00000424225 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
TOP2B-203ENST00000424225 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms