RNA–Protein interactions for RNA: ENST00000424155.6

TMED3-202, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 3 BASIC

Gene TMED3, Length 16,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-202ENST00000424155 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
TMED3-202ENST00000424155 PTMSP20962 102 aa8.48□□□□□ -1.05
TMED3-202ENST00000424155 ARID4BQ4LE39 1312 aaPredicted RBP8.48□□□□□ -1.05
TMED3-202ENST00000424155 IPO9Q96P70 1041 aaKnown RBP8.46□□□□□ -1.05
TMED3-202ENST00000424155 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
TMED3-202ENST00000424155 USP35Q9P2H5 1018 aa8.45□□□□□ -1.06
TMED3-202ENST00000424155 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
TMED3-202ENST00000424155 L1TD1Q5T7N2 865 aaKnown RBP8.43□□□□□ -1.06
TMED3-202ENST00000424155 BECN1Q14457 450 aa8.42□□□□□ -1.06
TMED3-202ENST00000424155 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
TMED3-202ENST00000424155 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
TMED3-202ENST00000424155 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
TMED3-202ENST00000424155 FAM50AQ14320 339 aaKnown RBP8.42□□□□□ -1.06
TMED3-202ENST00000424155 NISCHQ9Y2I1 1504 aa8.4□□□□□ -1.06
TMED3-202ENST00000424155 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
TMED3-202ENST00000424155 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
TMED3-202ENST00000424155 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.07
TMED3-202ENST00000424155 APPP05067 770 aa8.39□□□□□ -1.07
TMED3-202ENST00000424155 GSE1Q14687 1217 aa8.38□□□□□ -1.07
TMED3-202ENST00000424155 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
TMED3-202ENST00000424155 PTMAP06454 111 aaKnown RBP8.37□□□□□ -1.07
TMED3-202ENST00000424155 SLC4A1APQ9BWU0 796 aaKnown RBP8.37□□□□□ -1.07
TMED3-202ENST00000424155 MSH5O43196 834 aa8.35□□□□□ -1.07
TMED3-202ENST00000424155 FAM13BQ9NYF5 915 aa8.34□□□□□ -1.07
TMED3-202ENST00000424155 ARID3AQ99856 593 aa8.33□□□□□ -1.08
TMED3-202ENST00000424155 GOLGA6L22H0YM25 854 aa8.32□□□□□ -1.08
TMED3-202ENST00000424155 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.32□□□□□ -1.08
TMED3-202ENST00000424155 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
TMED3-202ENST00000424155 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
TMED3-202ENST00000424155 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
TMED3-202ENST00000424155 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
TMED3-202ENST00000424155 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
TMED3-202ENST00000424155 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
TMED3-202ENST00000424155 TAF7LQ5H9L4 462 aa8.28□□□□□ -1.08
TMED3-202ENST00000424155 FAM43AQ8N2R8 423 aa8.27□□□□□ -1.09
TMED3-202ENST00000424155 MSNP26038 577 aaKnown RBP8.27□□□□□ -1.09
TMED3-202ENST00000424155 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
TMED3-202ENST00000424155 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
TMED3-202ENST00000424155 FGD1P98174 961 aa8.25□□□□□ -1.09
TMED3-202ENST00000424155 MYH16Q9H6N6 1097 aa8.25□□□□□ -1.09
TMED3-202ENST00000424155 TCERG1O14776 1098 aaKnown RBP8.25□□□□□ -1.09
TMED3-202ENST00000424155 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
TMED3-202ENST00000424155 FRAT1Q92837 279 aaPredicted RBP8.24□□□□□ -1.09
TMED3-202ENST00000424155 MAP7D2Q96T17 732 aa8.23□□□□□ -1.09
TMED3-202ENST00000424155 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
TMED3-202ENST00000424155 SLC4A3P48751 1232 aa8.22□□□□□ -1.09
TMED3-202ENST00000424155 KCNH8Q96L42 1107 aa8.22□□□□□ -1.09
TMED3-202ENST00000424155 CHAF1AQ13111 956 aaPredicted RBP8.2□□□□□ -1.1
TMED3-202ENST00000424155 NAP1L2Q9ULW6 460 aaPredicted RBP8.2□□□□□ -1.1
TMED3-202ENST00000424155 TPM2P07951 284 aa8.2□□□□□ -1.1
TMED3-202ENST00000424155 PLCB2Q00722 1185 aa8.19□□□□□ -1.1
TMED3-202ENST00000424155 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
TMED3-202ENST00000424155 ZNF771Q7L3S4 317 aaPredicted RBP8.18□□□□□ -1.1
TMED3-202ENST00000424155 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
TMED3-202ENST00000424155 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
TMED3-202ENST00000424155 RGS3P49796 1198 aa8.18□□□□□ -1.1
TMED3-202ENST00000424155 NFKBIBQ15653 356 aa8.18□□□□□ -1.1
TMED3-202ENST00000424155 CCER2I3L3R5 266 aa8.16□□□□□ -1.1
TMED3-202ENST00000424155 SPRYD3Q8NCJ5 442 aa8.16□□□□□ -1.1
TMED3-202ENST00000424155 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
TMED3-202ENST00000424155 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
TMED3-202ENST00000424155 PDE4AP27815 886 aa8.15□□□□□ -1.1
TMED3-202ENST00000424155 HAP1P54257 671 aaPredicted RBP8.15□□□□□ -1.11
TMED3-202ENST00000424155 MAPK8IP2Q13387 824 aaPredicted RBP8.15□□□□□ -1.11
TMED3-202ENST00000424155 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.11
TMED3-202ENST00000424155 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
TMED3-202ENST00000424155 TPRNQ4KMQ1 711 aa8.14□□□□□ -1.11
TMED3-202ENST00000424155 KIAA2012Q0VF49 1180 aa8.13□□□□□ -1.11
TMED3-202ENST00000424155 TAF3Q5VWG9 929 aa8.13□□□□□ -1.11
TMED3-202ENST00000424155 HSP90AB1P08238 724 aaKnown RBP8.13□□□□□ -1.11
TMED3-202ENST00000424155 WDR43Q15061 677 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMED3-202ENST00000424155 ZHX1Q9UKY1 873 aaPredicted RBP8.1□□□□□ -1.11
TMED3-202ENST00000424155 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
TMED3-202ENST00000424155 R3HCC1Q9Y3T6 440 aaKnown RBP8.09□□□□□ -1.11
TMED3-202ENST00000424155 HSCBQ8IWL3 235 aa8.09□□□□□ -1.11
TMED3-202ENST00000424155 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.11
TMED3-202ENST00000424155 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
TMED3-202ENST00000424155 TONSLQ96HA7 1378 aa8.09□□□□□ -1.11
TMED3-202ENST00000424155 GBP4Q96PP9 640 aa8.09□□□□□ -1.12
TMED3-202ENST00000424155 AAMPQ13685 434 aa8.08□□□□□ -1.12
TMED3-202ENST00000424155 DRC7Q8IY82 874 aa8.08□□□□□ -1.12
TMED3-202ENST00000424155 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.08□□□□□ -1.12
TMED3-202ENST00000424155 GOLGA6L6A8MZA4 724 aa8.07□□□□□ -1.12
TMED3-202ENST00000424155 MRE11P49959 708 aa8.07□□□□□ -1.12
TMED3-202ENST00000424155 CSPP1Q1MSJ5 1256 aa8.07□□□□□ -1.12
TMED3-202ENST00000424155 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
TMED3-202ENST00000424155 CALRP27797 417 aaKnown RBP8.07□□□□□ -1.12
TMED3-202ENST00000424155 DHX37Q8IY37 1157 aaKnown RBP8.07□□□□□ -1.12
TMED3-202ENST00000424155 FTSJ3Q8IY81 847 aaKnown RBP8.06□□□□□ -1.12
TMED3-202ENST00000424155 E9PSI1 815 aa8.06□□□□□ -1.12
TMED3-202ENST00000424155 CHMP4AQ9BY43 222 aa8.06□□□□□ -1.12
TMED3-202ENST00000424155 C14orf37Q86TY3 774 aa8.06□□□□□ -1.12
TMED3-202ENST00000424155 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
TMED3-202ENST00000424155 MS4A1P11836 297 aa8.05□□□□□ -1.12
TMED3-202ENST00000424155 KCNJ4P48050 445 aa8.05□□□□□ -1.12
TMED3-202ENST00000424155 CALD1Q05682 793 aaKnown RBP8.05□□□□□ -1.12
TMED3-202ENST00000424155 ESPNB1AK53 854 aa8.05□□□□□ -1.12
TMED3-202ENST00000424155 PRDM10Q9NQV6 1147 aa8.05□□□□□ -1.12
TMED3-202ENST00000424155 IRX3P78415 501 aaPredicted RBP8.05□□□□□ -1.12
TMED3-202ENST00000424155 FRAT2O75474 233 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms