RNA–Protein interactions for RNA: ENST00000423566.6

AP3S2-202, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-202ENST00000423566 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
AP3S2-202ENST00000423566 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
AP3S2-202ENST00000423566 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.42
AP3S2-202ENST00000423566 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
AP3S2-202ENST00000423566 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
AP3S2-202ENST00000423566 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
AP3S2-202ENST00000423566 ADAMTS12P58397 1594 aa17.61■□□□□ 0.41
AP3S2-202ENST00000423566 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
AP3S2-202ENST00000423566 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
AP3S2-202ENST00000423566 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
AP3S2-202ENST00000423566 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
AP3S2-202ENST00000423566 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
AP3S2-202ENST00000423566 TIAM1Q13009 1591 aa17.55■□□□□ 0.4
AP3S2-202ENST00000423566 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
AP3S2-202ENST00000423566 KANK4Q5T7N3 995 aaPredicted RBP17.52■□□□□ 0.4
AP3S2-202ENST00000423566 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.39
AP3S2-202ENST00000423566 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
AP3S2-202ENST00000423566 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
AP3S2-202ENST00000423566 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
AP3S2-202ENST00000423566 IQGAP2Q13576 1575 aa17.5■□□□□ 0.39
AP3S2-202ENST00000423566 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
AP3S2-202ENST00000423566 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
AP3S2-202ENST00000423566 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
AP3S2-202ENST00000423566 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
AP3S2-202ENST00000423566 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
AP3S2-202ENST00000423566 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
AP3S2-202ENST00000423566 CFAP43Q8NDM7 1665 aa17.46■□□□□ 0.39
AP3S2-202ENST00000423566 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
AP3S2-202ENST00000423566 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
AP3S2-202ENST00000423566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
AP3S2-202ENST00000423566 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
AP3S2-202ENST00000423566 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
AP3S2-202ENST00000423566 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
AP3S2-202ENST00000423566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
AP3S2-202ENST00000423566 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
AP3S2-202ENST00000423566 NUP160Q12769 1436 aa17.38■□□□□ 0.37
AP3S2-202ENST00000423566 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
AP3S2-202ENST00000423566 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
AP3S2-202ENST00000423566 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
AP3S2-202ENST00000423566 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
AP3S2-202ENST00000423566 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
AP3S2-202ENST00000423566 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
AP3S2-202ENST00000423566 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
AP3S2-202ENST00000423566 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
AP3S2-202ENST00000423566 KIAA0556O60303 1618 aa17.29■□□□□ 0.36
AP3S2-202ENST00000423566 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
AP3S2-202ENST00000423566 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
AP3S2-202ENST00000423566 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
AP3S2-202ENST00000423566 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
AP3S2-202ENST00000423566 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
AP3S2-202ENST00000423566 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
AP3S2-202ENST00000423566 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
AP3S2-202ENST00000423566 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
AP3S2-202ENST00000423566 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
AP3S2-202ENST00000423566 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
AP3S2-202ENST00000423566 MIA2Q96PC5 1412 aa17.19■□□□□ 0.34
AP3S2-202ENST00000423566 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
AP3S2-202ENST00000423566 FBLN2P98095 1184 aa17.18■□□□□ 0.34
AP3S2-202ENST00000423566 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
AP3S2-202ENST00000423566 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
AP3S2-202ENST00000423566 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
AP3S2-202ENST00000423566 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
AP3S2-202ENST00000423566 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
AP3S2-202ENST00000423566 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
AP3S2-202ENST00000423566 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
AP3S2-202ENST00000423566 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
AP3S2-202ENST00000423566 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
AP3S2-202ENST00000423566 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.32
AP3S2-202ENST00000423566 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
AP3S2-202ENST00000423566 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
AP3S2-202ENST00000423566 ABCA8O94911 1581 aa17.06■□□□□ 0.32
AP3S2-202ENST00000423566 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
AP3S2-202ENST00000423566 ITGAEP38570 1179 aa17.05■□□□□ 0.32
AP3S2-202ENST00000423566 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
AP3S2-202ENST00000423566 PTPRGP23470 1445 aa17.04■□□□□ 0.32
AP3S2-202ENST00000423566 SHROOM2Q13796 1616 aa17.04■□□□□ 0.32
AP3S2-202ENST00000423566 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
AP3S2-202ENST00000423566 PLB1Q6P1J6 1458 aa17.03■□□□□ 0.32
AP3S2-202ENST00000423566 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
AP3S2-202ENST00000423566 ROCK1Q13464 1354 aa16.99■□□□□ 0.31
AP3S2-202ENST00000423566 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
AP3S2-202ENST00000423566 CHD1O14646 1710 aa16.98■□□□□ 0.31
AP3S2-202ENST00000423566 ATP10BO94823 1461 aa16.97■□□□□ 0.31
AP3S2-202ENST00000423566 NAIPQ13075 1403 aa16.96■□□□□ 0.3
AP3S2-202ENST00000423566 PTPRKQ15262 1439 aa16.96■□□□□ 0.3
AP3S2-202ENST00000423566 UACAQ9BZF9 1416 aa16.96■□□□□ 0.3
AP3S2-202ENST00000423566 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
AP3S2-202ENST00000423566 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
AP3S2-202ENST00000423566 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
AP3S2-202ENST00000423566 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
AP3S2-202ENST00000423566 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
AP3S2-202ENST00000423566 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
AP3S2-202ENST00000423566 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
AP3S2-202ENST00000423566 KIF14Q15058 1648 aa16.88■□□□□ 0.29
AP3S2-202ENST00000423566 DAPK1P53355 1430 aa16.88■□□□□ 0.29
AP3S2-202ENST00000423566 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
AP3S2-202ENST00000423566 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
AP3S2-202ENST00000423566 ABCC5O15440 1437 aa16.87■□□□□ 0.29
AP3S2-202ENST00000423566 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
AP3S2-202ENST00000423566 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms