RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 AEBP1Q8IUX7 1158 aa6.08□□□□□ -1.44
PGAP1-206ENST00000423035 TRIM44Q96DX7 344 aaPredicted RBP6.07□□□□□ -1.44
PGAP1-206ENST00000423035 PSMD1Q99460 953 aa6.07□□□□□ -1.44
PGAP1-206ENST00000423035 HMGB1P1B2RPK0 211 aaPredicted RBP6.06□□□□□ -1.44
PGAP1-206ENST00000423035 LMOD2Q6P5Q4 547 aa6.06□□□□□ -1.44
PGAP1-206ENST00000423035 PDE4CQ08493 712 aa6.05□□□□□ -1.44
PGAP1-206ENST00000423035 SCAF1Q9H7N4 1312 aaKnown RBP6.04□□□□□ -1.44
PGAP1-206ENST00000423035 TRIM41Q8WV44 630 aa6.04□□□□□ -1.44
PGAP1-206ENST00000423035 HMGXB3Q12766 1538 aa6.04□□□□□ -1.44
PGAP1-206ENST00000423035 APLP2Q06481 763 aa6.04□□□□□ -1.44
PGAP1-206ENST00000423035 STK11IPQ8N1F8 1099 aa6.04□□□□□ -1.44
PGAP1-206ENST00000423035 BCL11AQ9H165 835 aa6.03□□□□□ -1.44
PGAP1-206ENST00000423035 APPP05067 770 aa6.02□□□□□ -1.45
PGAP1-206ENST00000423035 RBM25P49756 843 aaKnown RBP6.02□□□□□ -1.45
PGAP1-206ENST00000423035 CADPSQ9ULU8 1353 aa6.02□□□□□ -1.45
PGAP1-206ENST00000423035 BAZ1BQ9UIG0 1483 aaKnown RBP6.02□□□□□ -1.45
PGAP1-206ENST00000423035 NEFMP07197 916 aa6.01□□□□□ -1.45
PGAP1-206ENST00000423035 PDS5BQ9NTI5 1447 aa5.99□□□□□ -1.45
PGAP1-206ENST00000423035 SMARCA2P51531 1590 aa5.99□□□□□ -1.45
PGAP1-206ENST00000423035 TAF7LQ5H9L4 462 aa5.99□□□□□ -1.45
PGAP1-206ENST00000423035 MROH2BQ7Z745 1585 aa5.98□□□□□ -1.45
PGAP1-206ENST00000423035 NEUROD2Q15784 382 aa5.98□□□□□ -1.45
PGAP1-206ENST00000423035 WDR70Q9NW82 654 aa5.98□□□□□ -1.45
PGAP1-206ENST00000423035 CCDC136Q96JN2 1154 aa5.98□□□□□ -1.45
PGAP1-206ENST00000423035 VSIG10Q8N0Z9 540 aa5.97□□□□□ -1.45
PGAP1-206ENST00000423035 THOC2Q8NI27 1593 aaKnown RBP5.95□□□□□ -1.46
PGAP1-206ENST00000423035 BAZ1AQ9NRL2 1556 aaPredicted RBP5.95□□□□□ -1.46
PGAP1-206ENST00000423035 PHF23Q9BUL5 403 aaPredicted RBP5.95□□□□□ -1.46
PGAP1-206ENST00000423035 ANP32BQ92688 251 aaKnown RBP5.95□□□□□ -1.46
PGAP1-206ENST00000423035 PLEKHG5O94827 1062 aa5.95□□□□□ -1.46
PGAP1-206ENST00000423035 SMARCA4P51532 1647 aa5.94□□□□□ -1.46
PGAP1-206ENST00000423035 BRD2P25440 801 aaKnown RBP5.94□□□□□ -1.46
PGAP1-206ENST00000423035 FBXW7Q969H0 707 aa5.94□□□□□ -1.46
PGAP1-206ENST00000423035 PEG3Q9GZU2 1588 aa5.94□□□□□ -1.46
PGAP1-206ENST00000423035 PTMAP06454 111 aaKnown RBP5.93□□□□□ -1.46
PGAP1-206ENST00000423035 OSCARQ8IYS5 282 aa5.93□□□□□ -1.46
PGAP1-206ENST00000423035 MRC2Q9UBG0 1479 aa5.93□□□□□ -1.46
PGAP1-206ENST00000423035 ZNF316A6NFI3 1004 aaPredicted RBP5.93□□□□□ -1.46
PGAP1-206ENST00000423035 ANP32CO43423 234 aa5.93□□□□□ -1.46
PGAP1-206ENST00000423035 TMEM132AQ24JP5 1023 aa5.93□□□□□ -1.46
PGAP1-206ENST00000423035 PATL2C9JE40 543 aaKnown RBP5.93□□□□□ -1.46
PGAP1-206ENST00000423035 RAD21O60216 631 aa5.92□□□□□ -1.46
PGAP1-206ENST00000423035 TMX4Q9H1E5 349 aaPredicted RBP5.92□□□□□ -1.46
PGAP1-206ENST00000423035 PKNOX2Q96KN3 472 aa5.92□□□□□ -1.46
PGAP1-206ENST00000423035 MEX3CQ5U5Q3 659 aaKnown RBP5.92□□□□□ -1.46
PGAP1-206ENST00000423035 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
PGAP1-206ENST00000423035 SENP3Q9H4L4 574 aaPredicted RBP5.91□□□□□ -1.46
PGAP1-206ENST00000423035 CIZ1Q9ULV3 898 aaPredicted RBP5.9□□□□□ -1.46
PGAP1-206ENST00000423035 CFTRP13569 1480 aa5.9□□□□□ -1.47
PGAP1-206ENST00000423035 WDR62O43379 1518 aa5.89□□□□□ -1.47
PGAP1-206ENST00000423035 LAMC3Q9Y6N6 1575 aa5.88□□□□□ -1.47
PGAP1-206ENST00000423035 FANCD2Q9BXW9 1451 aa5.88□□□□□ -1.47
PGAP1-206ENST00000423035 CLSTN1O94985 981 aa5.88□□□□□ -1.47
PGAP1-206ENST00000423035 RSF1Q96T23 1441 aaPredicted RBP5.87□□□□□ -1.47
PGAP1-206ENST00000423035 NEFHP12036 1026 aa5.87□□□□□ -1.47
PGAP1-206ENST00000423035 KRI1Q8N9T8 703 aaKnown RBP5.87□□□□□ -1.47
PGAP1-206ENST00000423035 URB2Q14146 1524 aaKnown RBP5.86□□□□□ -1.47
PGAP1-206ENST00000423035 OS9Q13438 667 aaPredicted RBP5.86□□□□□ -1.47
PGAP1-206ENST00000423035 TMCO4Q5TGY1 634 aa5.86□□□□□ -1.47
PGAP1-206ENST00000423035 ZNF608Q9ULD9 1512 aaPredicted RBP5.86□□□□□ -1.47
PGAP1-206ENST00000423035 CCDC97Q96F63 343 aaPredicted RBP5.85□□□□□ -1.47
PGAP1-206ENST00000423035 KCTD17Q8N5Z5 321 aa5.84□□□□□ -1.47
PGAP1-206ENST00000423035 GOLGA6L1Q8N7Z2 621 aa5.84□□□□□ -1.47
PGAP1-206ENST00000423035 TRIM26Q12899 539 aaPredicted RBP5.84□□□□□ -1.47
PGAP1-206ENST00000423035 CEP164Q9UPV0 1460 aa5.84□□□□□ -1.47
PGAP1-206ENST00000423035 PLCD4Q9BRC7 762 aa5.84□□□□□ -1.48
PGAP1-206ENST00000423035 ECM2O94769 699 aaPredicted RBP5.83□□□□□ -1.48
PGAP1-206ENST00000423035 PLCD3Q8N3E9 789 aa5.83□□□□□ -1.48
PGAP1-206ENST00000423035 WDR43Q15061 677 aaKnown RBP eCLIP5.83□□□□□ -1.48
PGAP1-206ENST00000423035 NOL8Q76FK4 1167 aaKnown RBP5.82□□□□□ -1.48
PGAP1-206ENST00000423035 CHGAP10645 457 aaKnown RBP5.82□□□□□ -1.48
PGAP1-206ENST00000423035 PAF1Q8N7H5 531 aa5.82□□□□□ -1.48
PGAP1-206ENST00000423035 DCAF8L1A6NGE4 600 aa5.82□□□□□ -1.48
PGAP1-206ENST00000423035 E9PSI1 815 aa5.81□□□□□ -1.48
PGAP1-206ENST00000423035 CYB5RLQ6IPT4 315 aa5.81□□□□□ -1.48
PGAP1-206ENST00000423035 CHMP4AQ9BY43 222 aa5.81□□□□□ -1.48
PGAP1-206ENST00000423035 ARHGEF11O15085 1522 aa5.81□□□□□ -1.48
PGAP1-206ENST00000423035 CHMP3Q9Y3E7 222 aa5.8□□□□□ -1.48
PGAP1-206ENST00000423035 AQRO60306 1485 aaKnown RBP eCLIP5.8□□□□□ -1.48
PGAP1-206ENST00000423035 APBB1O00213 710 aa5.79□□□□□ -1.48
PGAP1-206ENST00000423035 TRIM63Q969Q1 353 aa5.79□□□□□ -1.48
PGAP1-206ENST00000423035 WDR78Q5VTH9 848 aa5.79□□□□□ -1.48
PGAP1-206ENST00000423035 AK7Q96M32 723 aa5.79□□□□□ -1.48
PGAP1-206ENST00000423035 IFT140Q96RY7 1462 aa5.79□□□□□ -1.48
PGAP1-206ENST00000423035 TCERG1O14776 1098 aaKnown RBP5.78□□□□□ -1.48
PGAP1-206ENST00000423035 RSPH6AQ9H0K4 717 aa5.78□□□□□ -1.48
PGAP1-206ENST00000423035 FOXD4L1Q9NU39 408 aa5.77□□□□□ -1.49
PGAP1-206ENST00000423035 ARAP1Q96P48 1450 aa5.77□□□□□ -1.49
PGAP1-206ENST00000423035 TDRD9Q8NDG6 1382 aaKnown RBP5.77□□□□□ -1.49
PGAP1-206ENST00000423035 ADRA2BP18089 450 aa5.77□□□□□ -1.49
PGAP1-206ENST00000423035 UBTFP17480 764 aaKnown RBP5.77□□□□□ -1.49
PGAP1-206ENST00000423035 UBE2Q2Q8WVN8 375 aa5.76□□□□□ -1.49
PGAP1-206ENST00000423035 BCCIPQ9P287 314 aaKnown RBP eCLIP5.76□□□□□ -1.49
PGAP1-206ENST00000423035 NPHP1O15259 732 aa5.76□□□□□ -1.49
PGAP1-206ENST00000423035 DHX37Q8IY37 1157 aaKnown RBP5.76□□□□□ -1.49
PGAP1-206ENST00000423035 ZBTB47Q9UFB7 747 aaPredicted RBP5.75□□□□□ -1.49
PGAP1-206ENST00000423035 ACIN1Q9UKV3 1341 aaKnown RBP5.75□□□□□ -1.49
PGAP1-206ENST00000423035 PPP4R3CPQ6ZMV5 832 aa5.75□□□□□ -1.49
PGAP1-206ENST00000423035 WWC1Q8IX03 1113 aa5.75□□□□□ -1.49
PGAP1-206ENST00000423035 TOPBP1Q92547 1522 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms