RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
HDLBP-209ENST00000422933 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
HDLBP-209ENST00000422933 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
HDLBP-209ENST00000422933 KIF21BO75037 1637 aa16.24■□□□□ 0.19
HDLBP-209ENST00000422933 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
HDLBP-209ENST00000422933 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
HDLBP-209ENST00000422933 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
HDLBP-209ENST00000422933 NUP160Q12769 1436 aa16.19■□□□□ 0.18
HDLBP-209ENST00000422933 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
HDLBP-209ENST00000422933 CEP170Q5SW79 1584 aa16.18■□□□□ 0.18
HDLBP-209ENST00000422933 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
HDLBP-209ENST00000422933 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
HDLBP-209ENST00000422933 IQGAP2Q13576 1575 aa16.13■□□□□ 0.17
HDLBP-209ENST00000422933 JPH4Q96JJ6 628 aa16.12■□□□□ 0.17
HDLBP-209ENST00000422933 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
HDLBP-209ENST00000422933 CARMIL2Q6F5E8 1435 aa16.08■□□□□ 0.16
HDLBP-209ENST00000422933 KIF13AQ9H1H9 1805 aa16.07■□□□□ 0.16
HDLBP-209ENST00000422933 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-209ENST00000422933 RANGAP1P46060 587 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-209ENST00000422933 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
HDLBP-209ENST00000422933 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.15
HDLBP-209ENST00000422933 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
HDLBP-209ENST00000422933 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
HDLBP-209ENST00000422933 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
HDLBP-209ENST00000422933 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
HDLBP-209ENST00000422933 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-209ENST00000422933 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
HDLBP-209ENST00000422933 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
HDLBP-209ENST00000422933 PTPRGP23470 1445 aa15.92■□□□□ 0.14
HDLBP-209ENST00000422933 CLIP1P30622 1438 aa15.92■□□□□ 0.14
HDLBP-209ENST00000422933 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
HDLBP-209ENST00000422933 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
HDLBP-209ENST00000422933 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
HDLBP-209ENST00000422933 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDLBP-209ENST00000422933 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
HDLBP-209ENST00000422933 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
HDLBP-209ENST00000422933 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
HDLBP-209ENST00000422933 DIP2BQ9P265 1576 aa15.83■□□□□ 0.13
HDLBP-209ENST00000422933 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
HDLBP-209ENST00000422933 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
HDLBP-209ENST00000422933 UACAQ9BZF9 1416 aa15.8■□□□□ 0.12
HDLBP-209ENST00000422933 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-209ENST00000422933 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
HDLBP-209ENST00000422933 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
HDLBP-209ENST00000422933 ABCC2Q92887 1545 aa15.74■□□□□ 0.11
HDLBP-209ENST00000422933 UHRF1BP1LA0JNW5 1464 aa15.74■□□□□ 0.11
HDLBP-209ENST00000422933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-209ENST00000422933 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
HDLBP-209ENST00000422933 PLB1Q6P1J6 1458 aa15.73■□□□□ 0.11
HDLBP-209ENST00000422933 FAM69CQ0P6D2 419 aa15.73■□□□□ 0.11
HDLBP-209ENST00000422933 ABCA8O94911 1581 aa15.72■□□□□ 0.11
HDLBP-209ENST00000422933 APLP2Q06481 763 aa15.72■□□□□ 0.11
HDLBP-209ENST00000422933 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
HDLBP-209ENST00000422933 KDM6BO15054 1643 aa15.7■□□□□ 0.1
HDLBP-209ENST00000422933 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
HDLBP-209ENST00000422933 PPRC1Q5VV67 1664 aaKnown RBP15.7■□□□□ 0.1
HDLBP-209ENST00000422933 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
HDLBP-209ENST00000422933 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
HDLBP-209ENST00000422933 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
HDLBP-209ENST00000422933 KDM4FA0A1W2PPD8 638 aa15.67■□□□□ 0.1
HDLBP-209ENST00000422933 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
HDLBP-209ENST00000422933 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
HDLBP-209ENST00000422933 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
HDLBP-209ENST00000422933 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
HDLBP-209ENST00000422933 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
HDLBP-209ENST00000422933 ZCCHC11Q5TAX3 1644 aaKnown RBP15.64■□□□□ 0.09
HDLBP-209ENST00000422933 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
HDLBP-209ENST00000422933 ATP10BO94823 1461 aa15.61■□□□□ 0.09
HDLBP-209ENST00000422933 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
HDLBP-209ENST00000422933 ASXL2Q76L83 1435 aa15.57■□□□□ 0.08
HDLBP-209ENST00000422933 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
HDLBP-209ENST00000422933 GLI2P10070 1586 aa15.55■□□□□ 0.08
HDLBP-209ENST00000422933 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-209ENST00000422933 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
HDLBP-209ENST00000422933 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
HDLBP-209ENST00000422933 MTUS2Q5JR59 1369 aa15.54■□□□□ 0.08
HDLBP-209ENST00000422933 LRRIQ1Q96JM4 1722 aa15.53■□□□□ 0.08
HDLBP-209ENST00000422933 MAP3K4Q9Y6R4 1608 aa15.52■□□□□ 0.08
HDLBP-209ENST00000422933 MAP3K1Q13233 1512 aa15.52■□□□□ 0.07
HDLBP-209ENST00000422933 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
HDLBP-209ENST00000422933 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
HDLBP-209ENST00000422933 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
HDLBP-209ENST00000422933 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
HDLBP-209ENST00000422933 KIF14Q15058 1648 aa15.47■□□□□ 0.07
HDLBP-209ENST00000422933 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
HDLBP-209ENST00000422933 LRRC9Q6ZRR7 1453 aa15.44■□□□□ 0.06
HDLBP-209ENST00000422933 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
HDLBP-209ENST00000422933 CD109Q6YHK3 1445 aa15.41■□□□□ 0.06
HDLBP-209ENST00000422933 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
HDLBP-209ENST00000422933 ILDR1Q86SU0 546 aaPredicted RBP15.4■□□□□ 0.06
HDLBP-209ENST00000422933 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
HDLBP-209ENST00000422933 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
HDLBP-209ENST00000422933 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
HDLBP-209ENST00000422933 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
HDLBP-209ENST00000422933 TEX14Q8IWB6 1497 aa15.38■□□□□ 0.05
HDLBP-209ENST00000422933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDLBP-209ENST00000422933 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
HDLBP-209ENST00000422933 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
HDLBP-209ENST00000422933 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
HDLBP-209ENST00000422933 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms