RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
CTCFL-204ENST00000422869 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
CTCFL-204ENST00000422869 RBM19Q9Y4C8 960 aaKnown RBP18.04■□□□□ 0.48
CTCFL-204ENST00000422869 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
CTCFL-204ENST00000422869 LRRC9Q6ZRR7 1453 aa18■□□□□ 0.47
CTCFL-204ENST00000422869 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
CTCFL-204ENST00000422869 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
CTCFL-204ENST00000422869 NEFLP07196 543 aa17.98■□□□□ 0.47
CTCFL-204ENST00000422869 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
CTCFL-204ENST00000422869 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
CTCFL-204ENST00000422869 CFAP43Q8NDM7 1665 aa17.94■□□□□ 0.46
CTCFL-204ENST00000422869 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
CTCFL-204ENST00000422869 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
CTCFL-204ENST00000422869 ANP32CO43423 234 aa17.91■□□□□ 0.46
CTCFL-204ENST00000422869 CFTRP13569 1480 aa17.9■□□□□ 0.46
CTCFL-204ENST00000422869 IGF1RP08069 1367 aa17.89■□□□□ 0.45
CTCFL-204ENST00000422869 FAM50AQ14320 339 aaKnown RBP17.89■□□□□ 0.45
CTCFL-204ENST00000422869 MSH5O43196 834 aa17.88■□□□□ 0.45
CTCFL-204ENST00000422869 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
CTCFL-204ENST00000422869 PCF11O94913 1555 aaKnown RBP17.87■□□□□ 0.45
CTCFL-204ENST00000422869 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
CTCFL-204ENST00000422869 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
CTCFL-204ENST00000422869 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.44
CTCFL-204ENST00000422869 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
CTCFL-204ENST00000422869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTCFL-204ENST00000422869 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
CTCFL-204ENST00000422869 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
CTCFL-204ENST00000422869 TONSLQ96HA7 1378 aa17.75■□□□□ 0.43
CTCFL-204ENST00000422869 FYCO1Q9BQS8 1478 aa17.74■□□□□ 0.43
CTCFL-204ENST00000422869 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
CTCFL-204ENST00000422869 KDM5BQ9UGL1 1544 aa17.72■□□□□ 0.43
CTCFL-204ENST00000422869 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
CTCFL-204ENST00000422869 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
CTCFL-204ENST00000422869 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
CTCFL-204ENST00000422869 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
CTCFL-204ENST00000422869 UACAQ9BZF9 1416 aa17.7■□□□□ 0.42
CTCFL-204ENST00000422869 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
CTCFL-204ENST00000422869 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
CTCFL-204ENST00000422869 PTPN23Q9H3S7 1636 aa17.69■□□□□ 0.42
CTCFL-204ENST00000422869 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
CTCFL-204ENST00000422869 CASKIN1Q8WXD9 1431 aa17.69■□□□□ 0.42
CTCFL-204ENST00000422869 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
CTCFL-204ENST00000422869 HFM1A2PYH4 1435 aa17.68■□□□□ 0.42
CTCFL-204ENST00000422869 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.423e-6■■■□□ 17.6
CTCFL-204ENST00000422869 PTPRKQ15262 1439 aa17.67■□□□□ 0.42
CTCFL-204ENST00000422869 EFCAB5A4FU69 1503 aa17.66■□□□□ 0.42
CTCFL-204ENST00000422869 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
CTCFL-204ENST00000422869 NAIPQ13075 1403 aa17.61■□□□□ 0.41
CTCFL-204ENST00000422869 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
CTCFL-204ENST00000422869 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
CTCFL-204ENST00000422869 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
CTCFL-204ENST00000422869 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.41
CTCFL-204ENST00000422869 NCOA2Q15596 1464 aa17.58■□□□□ 0.41
CTCFL-204ENST00000422869 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
CTCFL-204ENST00000422869 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
CTCFL-204ENST00000422869 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
CTCFL-204ENST00000422869 CCDC184Q52MB2 194 aa17.55■□□□□ 0.4
CTCFL-204ENST00000422869 FMN1Q68DA7 1419 aa17.54■□□□□ 0.4
CTCFL-204ENST00000422869 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
CTCFL-204ENST00000422869 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
CTCFL-204ENST00000422869 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.4
CTCFL-204ENST00000422869 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
CTCFL-204ENST00000422869 MYOM3Q5VTT5 1437 aa17.52■□□□□ 0.39
CTCFL-204ENST00000422869 CUL7Q14999 1698 aa17.51■□□□□ 0.39
CTCFL-204ENST00000422869 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
CTCFL-204ENST00000422869 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
CTCFL-204ENST00000422869 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
CTCFL-204ENST00000422869 SUPT6HQ7KZ85 1726 aaKnown RBP17.48■□□□□ 0.39
CTCFL-204ENST00000422869 GCC2Q8IWJ2 1684 aa17.48■□□□□ 0.39
CTCFL-204ENST00000422869 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
CTCFL-204ENST00000422869 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
CTCFL-204ENST00000422869 SAMD9Q5K651 1589 aa17.46■□□□□ 0.39
CTCFL-204ENST00000422869 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.39
CTCFL-204ENST00000422869 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTCFL-204ENST00000422869 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
CTCFL-204ENST00000422869 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
CTCFL-204ENST00000422869 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
CTCFL-204ENST00000422869 DNMBPQ6XZF7 1577 aa17.44■□□□□ 0.38
CTCFL-204ENST00000422869 C11orf95C9JLR9 678 aaPredicted RBP17.44■□□□□ 0.38
CTCFL-204ENST00000422869 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
CTCFL-204ENST00000422869 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
CTCFL-204ENST00000422869 KDM6BO15054 1643 aa17.44■□□□□ 0.38
CTCFL-204ENST00000422869 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
CTCFL-204ENST00000422869 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
CTCFL-204ENST00000422869 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
CTCFL-204ENST00000422869 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
CTCFL-204ENST00000422869 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
CTCFL-204ENST00000422869 CCDC7Q96M83 1385 aa17.43■□□□□ 0.38
CTCFL-204ENST00000422869 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
CTCFL-204ENST00000422869 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
CTCFL-204ENST00000422869 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-204ENST00000422869 MAGI3Q5TCQ9 1506 aa17.4■□□□□ 0.38
CTCFL-204ENST00000422869 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
CTCFL-204ENST00000422869 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
CTCFL-204ENST00000422869 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
CTCFL-204ENST00000422869 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
CTCFL-204ENST00000422869 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
CTCFL-204ENST00000422869 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
CTCFL-204ENST00000422869 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
CTCFL-204ENST00000422869 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms