RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 CLSPNQ9HAW4 1339 aa19.98■□□□□ 0.79
CTCFL-203ENST00000422109 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
CTCFL-203ENST00000422109 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
CTCFL-203ENST00000422109 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
CTCFL-203ENST00000422109 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
CTCFL-203ENST00000422109 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
CTCFL-203ENST00000422109 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
CTCFL-203ENST00000422109 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
CTCFL-203ENST00000422109 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
CTCFL-203ENST00000422109 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
CTCFL-203ENST00000422109 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
CTCFL-203ENST00000422109 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
CTCFL-203ENST00000422109 PCF11O94913 1555 aaKnown RBP19.84■□□□□ 0.77
CTCFL-203ENST00000422109 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
CTCFL-203ENST00000422109 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
CTCFL-203ENST00000422109 TOPBP1Q92547 1522 aa19.83■□□□□ 0.76
CTCFL-203ENST00000422109 DDX10Q13206 875 aaKnown RBP19.82■□□□□ 0.76
CTCFL-203ENST00000422109 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
CTCFL-203ENST00000422109 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
CTCFL-203ENST00000422109 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
CTCFL-203ENST00000422109 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
CTCFL-203ENST00000422109 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
CTCFL-203ENST00000422109 MAP3K1Q13233 1512 aa19.69■□□□□ 0.74
CTCFL-203ENST00000422109 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
CTCFL-203ENST00000422109 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
CTCFL-203ENST00000422109 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
CTCFL-203ENST00000422109 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
CTCFL-203ENST00000422109 CFAP43Q8NDM7 1665 aa19.64■□□□□ 0.73
CTCFL-203ENST00000422109 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.73
CTCFL-203ENST00000422109 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
CTCFL-203ENST00000422109 BCANQ96GW7 911 aa19.62■□□□□ 0.73
CTCFL-203ENST00000422109 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
CTCFL-203ENST00000422109 FMN1Q68DA7 1419 aa19.61■□□□□ 0.73
CTCFL-203ENST00000422109 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
CTCFL-203ENST00000422109 PPP1R15AO75807 674 aaPredicted RBP19.59■□□□□ 0.73
CTCFL-203ENST00000422109 TONSLQ96HA7 1378 aa19.58■□□□□ 0.72
CTCFL-203ENST00000422109 PTPRKQ15262 1439 aa19.58■□□□□ 0.72
CTCFL-203ENST00000422109 EFCAB5A4FU69 1503 aa19.58■□□□□ 0.72
CTCFL-203ENST00000422109 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
CTCFL-203ENST00000422109 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
CTCFL-203ENST00000422109 CUL7Q14999 1698 aa19.57■□□□□ 0.72
CTCFL-203ENST00000422109 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
CTCFL-203ENST00000422109 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
CTCFL-203ENST00000422109 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
CTCFL-203ENST00000422109 NCOA2Q15596 1464 aa19.52■□□□□ 0.71
CTCFL-203ENST00000422109 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.713e-6■■■□□ 17.6
CTCFL-203ENST00000422109 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
CTCFL-203ENST00000422109 FOXD1Q16676 465 aa19.49■□□□□ 0.71
CTCFL-203ENST00000422109 ANP32CO43423 234 aa19.48■□□□□ 0.71
CTCFL-203ENST00000422109 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
CTCFL-203ENST00000422109 MYOM3Q5VTT5 1437 aa19.46■□□□□ 0.71
CTCFL-203ENST00000422109 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
CTCFL-203ENST00000422109 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
CTCFL-203ENST00000422109 FKBP8Q14318 412 aa19.44■□□□□ 0.7
CTCFL-203ENST00000422109 NAIPQ13075 1403 aa19.43■□□□□ 0.7
CTCFL-203ENST00000422109 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
CTCFL-203ENST00000422109 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
CTCFL-203ENST00000422109 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
CTCFL-203ENST00000422109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTCFL-203ENST00000422109 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
CTCFL-203ENST00000422109 MAGI3Q5TCQ9 1506 aa19.4■□□□□ 0.7
CTCFL-203ENST00000422109 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.69
CTCFL-203ENST00000422109 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
CTCFL-203ENST00000422109 CDK13Q14004 1512 aaKnown RBP19.38■□□□□ 0.69
CTCFL-203ENST00000422109 FBLN2P98095 1184 aa19.38■□□□□ 0.69
CTCFL-203ENST00000422109 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
CTCFL-203ENST00000422109 SUPT6HQ7KZ85 1726 aaKnown RBP19.35■□□□□ 0.69
CTCFL-203ENST00000422109 ZNF644Q9H582 1327 aaPredicted RBP19.35■□□□□ 0.69
CTCFL-203ENST00000422109 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
CTCFL-203ENST00000422109 HSPA5P11021 654 aaKnown RBP19.32■□□□□ 0.68
CTCFL-203ENST00000422109 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
CTCFL-203ENST00000422109 ZNF777Q9ULD5 760 aaPredicted RBP19.31■□□□□ 0.68
CTCFL-203ENST00000422109 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
CTCFL-203ENST00000422109 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
CTCFL-203ENST00000422109 MYT1Q01538 1121 aa19.29■□□□□ 0.68
CTCFL-203ENST00000422109 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
CTCFL-203ENST00000422109 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
CTCFL-203ENST00000422109 NEFLP07196 543 aa19.28■□□□□ 0.68
CTCFL-203ENST00000422109 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
CTCFL-203ENST00000422109 L3MBTL2Q969R5 705 aa19.27■□□□□ 0.68
CTCFL-203ENST00000422109 IQGAP2Q13576 1575 aa19.27■□□□□ 0.68
CTCFL-203ENST00000422109 KDM6BO15054 1643 aa19.26■□□□□ 0.67
CTCFL-203ENST00000422109 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
CTCFL-203ENST00000422109 IRX6P78412 446 aaPredicted RBP19.25■□□□□ 0.67
CTCFL-203ENST00000422109 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
CTCFL-203ENST00000422109 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
CTCFL-203ENST00000422109 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
CTCFL-203ENST00000422109 POLR3GLQ9BT43 218 aa19.24■□□□□ 0.67
CTCFL-203ENST00000422109 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
CTCFL-203ENST00000422109 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
CTCFL-203ENST00000422109 HECW1Q76N89 1606 aa19.22■□□□□ 0.67
CTCFL-203ENST00000422109 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTCFL-203ENST00000422109 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
CTCFL-203ENST00000422109 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
CTCFL-203ENST00000422109 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
CTCFL-203ENST00000422109 C11orf95C9JLR9 678 aaPredicted RBP19.18■□□□□ 0.66
CTCFL-203ENST00000422109 DENND4BO75064 1496 aaPredicted RBP19.18■□□□□ 0.66
CTCFL-203ENST00000422109 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
CTCFL-203ENST00000422109 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
CTCFL-203ENST00000422109 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms